Daphnia pulicaria: 124314678
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Entry
124314678 CDS
T08670
Name
(RefSeq) transcription initiation factor TFIID subunit 6-like
KO
K03131
transcription initiation factor TFIID subunit 6
Organism
dpz
Daphnia pulicaria
Pathway
dpz03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
dpz00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
124314678
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dpz03021
]
124314678
03036 Chromosome and associated proteins [BR:
dpz03036
]
124314678
Transcription machinery [BR:
dpz03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
124314678
Coactivators
SAGA/TFTC/STAGA complex
124314678
Chromosome and associated proteins [BR:
dpz03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
124314678
STAGA complex
124314678
TFTC complex
124314678
SAGA complex
124314678
SLIK complex
124314678
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF6_C
TAF
TFIID-31kDa
Motif
Other DBs
NCBI-GeneID:
124314678
NCBI-ProteinID:
XP_046635920
LinkDB
All DBs
Position
10:5185291..5187995
Genome browser
AA seq
595 aa
AA seq
DB search
MSEYESAGGLNLPIESMKMMAESVGVAGLSDSAAKELADEINFRVKTIIQDATKFMHHGK
RKKLSTMDVDHALKIKNIEPLYGFSNPDHIPFRFASGGGRELHFLEDKELDIADIIGGSL
PKLPLDVSLRAHWLSIDGIQPAVPENPPSLSKDQQRLESSDPVSKLAKIGDKTKKASTLT
AINKPKTETVQVKQLTAHELSVEQQLYYKEITEACVGSDEARRAEAFQSLASDPGLHQML
PRLCTFIAEGVRVNVVQNNLAPLIYLMRMVKALLSNQTLYLEKYLHELVPAVTSCMVSKQ
LCLRPEVDNHWALRDFSSRLIAQICKNYHTTTNNCQTRVTRLFCRALANDKMPLASFYGA
LVGLSELGTEVIKAFIIPKIRAIGERIELYLDGTGQANADRIAASHIKQLTIKVMVPILK
VTRQPPDNIDDYRQEFGYLGPALHGAVTRARSQNITPAASSTGISSAASGSLGISAGRGT
IVMGGASSSAATSRTQSGAVANAAGNPTKYMFVTSRPSTPVQAAAPQTTQVVKLVSGAGQ
GNKPNTMSGNQPKYVMVQASNTSQIVRAPIKVEGGEATVESTMEIKTENITILDD
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaatacgaatctgctggcggtcttaatctgccaattgaatccatgaaaatgatg
gctgaaagtgtcggtgtcgccggtctatcagactcggctgctaaggaattggcagatgaa
attaatttcagagtgaagaccattatccaagatgcaacaaaattcatgcaccatggaaaa
aggaaaaaactttctacaatggatgttgaccatgcacttaaaattaaaaacattgaacct
ctgtatgggttttcaaatccagaccacattccttttagatttgcaagtggtggaggacgt
gaattgcatttcctagaagataaagaactggacattgccgatatcattggcggttctctg
ccaaagttaccattagatgtttctctaagagctcattggcttagtattgatggaatacag
ccagcagttccagaaaatcctccatcattgtccaaagatcaacagcggctggaaagctct
gacccagtctctaaacttgctaaaattggggacaaaaccaaaaaggcttcaactctcaca
gcaattaacaaacctaaaacagaaactgttcaagttaaacagcttacagcgcatgaattg
tctgttgaacagcaactctactataaagaaatcactgaggcgtgtgttggctccgatgaa
gccagacgagctgaagcattccaaagtttggcttcagatcctggattgcatcaaatgcta
cctcgcctatgcacctttattgctgaaggcgttcgagttaacgttgttcaaaacaatttg
gcacctcttatttaccttatgcgaatggttaaagcactgctttccaatcaaacgctttac
cttgaaaaatatcttcacgagttagttcctgctgtcacgtcttgcatggtcagcaaacaa
ctttgtcttcggccagaagtggacaatcattgggctttgagagatttctcttcacgcctg
attgcacaaatttgcaagaattaccacacaacgacgaataattgccagactcgtgtcacg
cggttgttctgtcgagcgctggccaacgacaaaatgccattggcgtcattttacggcgct
ctcgttggattatccgaattgggaacggaagtgatcaaagccttcattattccgaaaata
cgggcgataggtgaacgcatcgaactttacttggatggaacagggcaggccaatgccgat
cggatagcagcctcccacatcaagcaattgacgatcaaagtcatggtgcctatattgaaa
gtgacgcgccaaccgcctgataacattgacgattaccgtcaggagttcgggtatcttggg
ccggctcttcacggcgccgtaactagagcccgatctcagaacataactccggcggcgtcg
tctactggcatttcatcagctgcatctggcagtctaggaatatctgctgggcgtgggacc
atcgtcatgggcggagcttccagttcagctgcgacttcgcgaactcaaagtggcgctgta
gccaacgctgctggcaatcctactaaatacatgttcgtgacttctagaccttcaactccc
gttcaggctgccgcccctcagaccactcaggtcgtcaaattagtttccggcgctggacag
ggaaataaaccgaataccatgtctggcaaccaacctaaatacgtgatggttcaagcatcc
aacaccagccaaatcgttcgggctcctataaaagtggaaggcggtgaagcgacggtcgaa
tctaccatggaaatcaagacggaaaatatcaccattctcgatgattga
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