Daphnia pulicaria: 124314701
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Entry
124314701 CDS
T08670
Name
(RefSeq) RING-type E3 ubiquitin-protein ligase PPIL2-like
KO
K10598
peptidyl-prolyl cis-trans isomerase-like 2 [EC:
5.2.1.8
]
Organism
dpz
Daphnia pulicaria
Pathway
dpz04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
dpz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
124314701
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dpz03041
]
124314701
03110 Chaperones and folding catalysts [BR:
dpz03110
]
124314701
04121 Ubiquitin system [BR:
dpz04121
]
124314701
Enzymes [BR:
dpz01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.8 peptidylprolyl isomerase
124314701
Spliceosome [BR:
dpz03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
124314701
Complex C
U4/U6.U5 tri-SnRNP related factors
124314701
Other splicing related proteins
Minor spliceosome components
Minor spliceosome associated proteins
124314701
Chaperones and folding catalysts [BR:
dpz03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Cyclophilin
124314701
Ubiquitin system [BR:
dpz04121
]
Ubiquitin ligases (E3)
U-box type E3
124314701
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pro_isomerase
Rtf2
U-box
V-set_CD47
zf-Nse
Motif
Other DBs
NCBI-GeneID:
124314701
NCBI-ProteinID:
XP_046635968
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All DBs
Position
10:complement(7007465..7009977)
Genome browser
AA seq
520 aa
AA seq
DB search
MGKRQHQKDKMYLTSTEWSTLYGGKKPVNPNSASASFRRLPYDHCALSLQLFENPLCDTE
GNVFDLLAIVPYLKKYKTNPVTGKPLESKSLLRLNYHKNAEGAYHCPVLFKQFTDKSHIV
AIRTTGNVFSYEAVEQLNLKPKNWKELLTDETFARQDIITLQDPSHLEKFNIAKFYHVTH
DQKIENEELIRAKTDPAARLKYINAETKGVLAELEQEYKAPEETVTIKAVADSINAAHYS
TGAVAAGFTSTVMAPETKHEPAILDESIVRYQRIKKKGYVRLVTNVGPLNLELHCEMVPK
TCENFVNLCKKGYYNNTKFHRSIKHFMIQGGDPTGTGTGGESCWGGSFEDEFKPNLSHTG
RGILSMANSGTNTNKSQFFITYRSCKHLDGKHTIFGRVVGGMETLSAMERIGTDNKDRPV
EEIIIESSQIFTDPYAEVDEKLVIERAAALEEAERQLKEAKASIPKAQLKVFKQSGVGKY
INPKAFTNKPADSAGEESGSSQHKKAKTSANYSFGNFSNW
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaacgacaacatcagaaagataaaatgtacttgacaagtacagagtggagcaca
ttgtatggtgggaagaagcctgtgaatccaaatagtgccagtgcttcatttcgacgcctt
ccatatgatcactgtgccttgtcacttcagctttttgagaatcctttgtgtgacactgaa
ggaaatgttttcgatcttcttgctatagttccatacttgaaaaagtataaaactaatcca
gtaacaggaaaaccgttggaaagcaaatcccttctgaggttaaattaccataaaaatgct
gaaggggcataccattgccctgtattgttcaagcagttcaccgacaaatcccacattgtg
gccatcagaactactggaaatgtgttctcctatgaggcagtagagcaactcaatctgaag
ccaaaaaactggaaagagttgttaacagatgaaacatttgcacgtcaagatattatcact
cttcaagacccatctcatctagaaaagtttaacattgctaaattttatcatgtaacacat
gatcagaaaatcgaaaatgaagaattaataagggccaaaaccgatcctgcagcccgcctc
aaatacatcaatgcagaaacgaagggagttttggcagaattagaacaggaatacaaggca
cctgaagagactgttactataaaagcagtagctgattccattaatgcggctcattattcc
accggggctgtcgctgctggttttacttctacggtgatggcaccagaaacgaagcatgaa
ccagcaattctcgatgaaagtatcgttcgatatcagcggattaagaaaaaaggttatgtt
agactagttacaaatgtcgggcctcttaatttagagttacattgtgaaatggtacctaaa
acgtgtgaaaatttcgtcaacctttgtaaaaaaggctactacaacaataccaagtttcat
cggtctatcaagcatttcatgattcaaggtggcgatcccactggaactggtaccggagga
gagtcttgttggggaggatcatttgaagatgaattcaagccgaacctgtcccacaccggt
cggggtattttatcgatggcgaactcgggaaccaacactaataaatctcagttttttatc
acgtatcgctcgtgtaaacatctggacggcaagcacacaatattcggccgtgtcgtgggt
ggaatggaaactttgagcgctatggaacgaattggtactgacaataaagatcgacccgtt
gaagagattattattgagtcgtcacagatatttacagatccatatgccgaagtggacgaa
aagttggtgattgagagagccgcagcgctagaagaagctgagagacagttgaaggaagca
aaggcttccatccctaaagcccagcttaaggttttcaaacaatctggtgtaggaaaatac
atcaaccctaaagctttcaccaacaaaccagctgattcggctggagaagaatccggcagt
tctcaacataaaaaagctaaaacatctgctaactattcatttggtaatttcagtaattgg
tga
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