Daphnia pulicaria: 124315864
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Entry
124315864 CDS
T08670
Name
(RefSeq) eukaryotic translation initiation factor 4 gamma 1-like isoform X1
KO
K03260
translation initiation factor 4G
Organism
dpz
Daphnia pulicaria
Brite
KEGG Orthology (KO) [BR:
dpz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dpz03019
]
124315864
03012 Translation factors [BR:
dpz03012
]
124315864
Messenger RNA biogenesis [BR:
dpz03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
124315864
mRNA cycle factors
Stress granule specific factors
124315864
Translation factors [BR:
dpz03012
]
Eukaryotic type
Initiation factors
eIF-4
124315864
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MIF4G
MA3
W2
eIF4G1-like_eIF4E-bd
DUF3138
TMEM214
Motif
Other DBs
NCBI-GeneID:
124315864
NCBI-ProteinID:
XP_046637532
LinkDB
All DBs
Position
11:754012..765214
Genome browser
AA seq
1691 aa
AA seq
DB search
MHNHQKAKNIHSQQQQQQQPQPQSGPPSYPNQQSRPNTYHFDDASQSMYIQFGYGGPYVG
GTGAGQVPPRLPLVSGLQGPTQPIAAPNSSVGGMPQGPPPGNFVGHSPLDLSKQTPPHHQ
SAHHSLPPASLGVNQQLAMANPGHSGPMQGRPTQGNNQFFGRQIRPGNQHMPRPPMAGGT
INPNHPPNAPQALPYPGMNQPLLFVIGDQFSQQSPYLSYPANPPAYYPQSGNLPPGNVSF
QQPRAAQQTYGYRQTPPYPTFPMQSTPAVFYQQQQPQPQQPQQQQQPQQQQPQQTQQPQQ
PQQVPVAPPPTAQPRESSGSSRRARSSALRIVDPNTNRDVLTGEEVLVSTSVVVTPTTAT
PPEIVAPGVAAAPVAAVDEVEAPLTVTAPVTSETEEMAPTPKEEAVVVTPPDNTNVEVIE
EVKAEEKTVPTVAAVPVVVAAPPAPTPPVPATVAAPVVATPPAPVIEKEVITVPVTQENG
EVPSPSEPPSSSASPTPASTSVSPEQGEGRGNPKGGKKGRKSSRTGSTPTPPTPTPPPPQ
SIEEVKIVAQPVATVAEIPAPIPVKDVEPVAAPIASAVVPTTQAPVIDSSPKVEIEIKDT
PKPLPVVPESDVEKPSEKPVIAVETEPVITNGDKQGSSPSPSVIVMTPPPITASDDGENR
APGKSSSLKYTYKDDQWSPVNPEGKKTYDRNFLLELQNNPASQKKPDGLPSLEVVRDKAS
TMKRGVSVGDFTPPFVKMMPAKGLPKRNSQQGSRDQGMGQQQPPQRREIKLMNSLVRQER
PEDPNVWKPKHASKTKEEKENPDKASTEGMLKTVRGILNKLTPSKFEALLARIQALDIDS
EDRLAGVIKLFFEKAVDEPIFSSMYAKMCQALSTKEVASAANPAETTNFRKLLLTRCQKE
FEKDSAGLVDVENKKKEIETAETEAKKKELELELEDLVNSNRRKSLGNIRFIGELFKLRI
LSVKIMHQCILRLLSQPEDEESLECLCRLLSTIGKELETPMQVPAGRSTSISTNRETMNS
YFSTLDGIVNKRKISNRIRFMIQDVVDLRKTGWKPRREDNNPKTIDQIHREVHKEREEQE
RELNNPQFQGPMGSMGGLSRDGRMGDRRGGDDRNRKQSRPSDDGWNTVQNSGNRGGNVKL
DMKQLRIPKASGDADQAVISLGPGGKGMTSWGRGASGGMSQSMIGGVGGGASQDTRSNRY
QILEDDSGTQHESGKAPFAGRSSLGGPPQSGRGGNQDYRTMPGATKSAFFPPKDGDRGLD
PLRSQNSGFSGRSRSQQSSRENSVTRPVIRETAQPPALSREVSKDVLLGKSTVTDDEIER
KSHSLLGEYFTNEKIEDAVLDMKEWLHPSTIARFINQCLLHVLEHNKKERRATGILLKEM
VKRKLFNSSDIMEGFTELLQSAEDFIVDIPKLWEYVAELVEPLFEEGVINLNFLPQLSST
LNSSLVANFIAAVLKELVKAQGVAGAERIFIMSNAPLTSVLPSGVDLNAFLAQHKELEFL
SKVDSIPRGSGSVGKSSSSAIPASQVNIDFQHSLEKYLRDATQLTTDDVCSWIQKQYVGE
VNPAFIRALVTAVTESSIEGRGTDSKLNNTVLKNRTEVLRRYVDNIADRELQLLYAVQTL
VTQRQHPKGLIQGIFETLYDSNVVSEEGFESWVSADDPLEREGKAVALKMITSFLTWLKE
ADPESDQEADA
NT seq
5076 nt
NT seq
+upstream
nt +downstream
nt
atgcacaatcaccagaaggccaaaaacatccacagccagcagcagcagcagcagcaacct
cagccacagtccggaccacctagttatcccaaccaacaatccagaccaaacacctatcac
tttgatgatgcttcacagagtatgtatattcagttcggttacgggggaccgtatgtaggt
ggcaccggtgctggacaagtcccacctcgcctgcctctggtttctgggcttcagggtcct
actcaacctattgctgctcctaattcgtctgttggaggaatgccccaaggaccaccacca
ggcaatttcgtaggccacagtccacttgacctgtcaaagcagacaccaccacaccatcag
tctgctcatcactctcttcctccagcttcgttgggagtgaatcaacaattagccatggca
aatcctggacattctggcccaatgcagggtagaccaactcagggaaataaccagtttttc
ggtcgtcagatacgcccgggaaatcagcacatgcctagaccccctatggcaggaggtacc
ataaatcccaatcacccacccaatgctcctcaggccttaccttaccctgggatgaatcaa
cccttacttttcgtcattggagatcaattcagccagcaatcgccctatttatcgtacccg
gcgaatcctccagcgtattatccacaatcagggaacctgcctcccggaaatgtgtcgttc
cagcaaccgcgagcagctcagcaaacgtatggttacagacagacgcccccatacccgact
tttcctatgcagagtactccagctgtattttaccagcaacagcagcctcaaccccagcaa
cctcaacaacaacaacaaccccaacagcagcagccccaacaaacccagcagccccaacag
ccacagcaagtccctgtcgctccaccaccgactgcccaaccgcgtgaaagttctggatca
tcacggagggcaaggtcaagtgccttgcgtattgttgaccccaatactaatagggacgtc
ttaaccggtgaggaagtgttggtcagtacgtcagtcgtggttactccaaccactgctacg
cctcccgaaatcgtggcacccggtgttgcggcggcgcctgtagcggccgtggacgaagtt
gaggcaccattaacagtgacggcaccagtcacgtcggagacggaagaaatggccccgacc
ccgaaggaggaagctgttgttgttactccaccagacaatacaaacgttgaagtaatcgaa
gaagttaaggccgaggaaaagacggtaccaacagtagctgctgttcccgtagttgtcgct
gcaccgccagcaccaacgccgcctgtgccagccacagtcgctgctccggtagtagcgaca
ccgccggcaccggtcatcgaaaaggaggtcatcactgtccccgttacccaggagaacggt
gaagtaccctctcccagtgagccaccttccagttcggcatcgcccactcccgcttcgact
tctgttagtcccgaacaaggcgaaggacgaggcaaccccaagggtggaaagaagggacgt
aagagctcaaggacgggttcgacccccacacctcctactcccactccccctcccccacag
agcatcgaggaagttaaaatcgtggcccaacctgtggctactgttgccgaaattcctgct
ccaattccggtgaaagatgttgagccggttgctgctccaattgcttctgccgttgttccg
acaactcaagcaccagtgattgattcatcacccaaggtggaaattgaaatcaaagatacg
ccaaaaccattgccggtcgttccggaatcggatgtcgaaaagccttcagagaagcccgtt
attgcagtcgaaacagagcctgtgatcaccaatggggataagcaaggatcgagcccttcg
cctagtgtgatagtgatgacaccaccaccgattaccgcgagtgatgatggagaaaatcgg
gcacctggtaaatcgtcgtccctgaaatacacctacaaggatgatcaatggagtccggtc
aatccagaagggaaaaagacatacgaccgtaacttccttttggaattacagaacaatccc
gcttcccaaaagaaaccggatggtctgcccagtttagaagtagttcgcgataaggcttct
accatgaagcgtggtgtttccgttggtgacttcactccaccctttgttaaaatgatgccg
gcaaaggggcttcctaaaaggaatagtcaacaaggaagtcgagatcagggaatgggtcag
caacaaccaccccaaaggagagaaatcaagctgatgaattctttagtaagacaagaacgt
cccgaagatcctaacgtttggaaacccaagcatgcttcaaaaacaaaggaagagaaagaa
aaccccgataaagccagcactgagggaatgctaaagaccgtccgaggaatcctgaacaag
ttgactccttctaaatttgaagcgttattagcgaggattcaagccttagatattgatagc
gaagatcggttagcgggagtaatcaagctgtttttcgagaaggctgttgatgaacccatt
ttctcgtctatgtatgcaaaaatgtgtcaagctttgtcaacaaaagaagtagcttctgca
gctaatccagctgaaacgacgaactttcgtaagctactgctgactcgttgccagaaagaa
tttgagaaggatagtgccggtctagttgacgtggaaaacaaaaagaaggaaattgaaacc
gccgaaacggaggccaagaaaaaggaactcgaacttgaactagaagatctggtcaattca
aatcgaagaaaatcattagggaacattaggtttattggagaattatttaaattgcgaatt
ctgtccgtgaaaattatgcatcaatgtattcttcggttgttgagtcaacctgaagatgaa
gagtcgctcgagtgcctctgtagattgttgtcgacaatcggcaaggaattggaaactcca
atgcaagttcccgccggaagatcaacatcaatttcgacgaatcgcgagaccatgaattca
tacttcagcactctggacggtatcgttaataagcgcaaaatatcgaaccgtatccgtttc
atgattcaagacgtcgttgatttgcggaaaaccgggtggaagcctcgtcgtgaggacaat
aatcccaagacgatcgaccagatccacagggaagttcacaaagagcgtgaagagcaggag
agggagttgaacaacccacaattccagggacctatgggttccatgggtggtctttctcgt
gacggtagaatgggcgacagacgcggtggtgatgaccgtaatcggaaacaatcacgtccc
agtgacgatggctggaacaccgttcagaatagtggtaataggggtggcaatgtcaaatta
gatatgaagcaacttcggatacccaaggcgtctggagatgctgatcaagctgttattagt
ttaggccctggaggtaagggcatgacttcttggggtcgaggagcctcaggtggcatgtct
caatcgatgatcggcggtgtcggtggtggtgcatcgcaagatactcgatccaatcgctac
caaatcttggaagacgactctggaactcaacacgaaagcggcaaagcaccattcgctgga
cgctctagtctgggtggtccgccacaaagtggtcgcggtggtaatcaagactaccggaca
atgcctggagccactaaaagtgctttcttccctcctaaggacggtgatcgtggacttgac
cctcttcgctcacagaactccggtttctctggtcgttctcgtagtcagcagtcttctcgt
gaaaactccgttactcgtcccgtcattcgcgaaacggctcaaccaccagcgttgtcacgc
gaagtatccaaagatgtacttttaggtaaatctaccgtgacagatgacgagattgagcga
aagtctcattcgcttctaggtgaatatttcacgaatgaaaaaatagaggatgctgttctt
gacatgaaggaatggctgcatccatcgaccatagccagatttatcaatcaatgcttgctg
cacgtactagaacataataaaaaagaacgtagagcgacaggcattttgttgaaagaaatg
gttaaaagaaaactgtttaattcctctgacattatggaaggatttactgaactcctccaa
tcggctgaagacttcattgtggacattcccaagttgtgggaatatgtggctgagctggtt
gagcctctgtttgaagaaggcgtgataaatttgaactttcttccgcagttgtcatcgacc
ctgaattcatctttggttgctaattttatagctgcagttctgaaggaattagtcaaagca
cagggtgtggctggagctgaaagaatatttatcatgtcgaatgcaccactcaccagtgtt
ttaccatctggtgttgacctgaatgcattcctcgctcaacataaggaactcgaattcctt
tccaaagtcgattctataccaaggggtagcggcagtgttggcaagtccagcagcagtgct
atccccgccagtcaagttaacatcgattttcagcacagcctggagaagtacttgagagac
gcgacccaattgactacagatgacgtctgtagctggattcagaaacaatatgttggtgaa
gtgaatcccgctttcattcgtgccttggtcaccgcagtaaccgagagttctattgaagga
cgtggtacagacagtaaactgaacaacactgttttgaaaaatcggacggaggtgttgagg
cggtacgttgacaacattgctgatcgtgagcttcaactgctttacgcagttcagacttta
gtgacccagcgacaacaccccaaaggtttaattcaaggcatcttcgagaccctctatgac
agtaacgtcgtttctgaagagggctttgagtcgtgggtgtctgccgacgatcctttggaa
cgtgaaggcaaagctgtggcactcaagatgatcacatcttttctgacgtggctgaaggaa
gctgaccctgaaagcgatcaagaggcggatgcctga
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integrated database retrieval system
