Daphnia pulicaria: 124316266
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Entry
124316266 CDS
T08670
Name
(RefSeq) RNA-binding protein Musashi homolog 2-like isoform X1
KO
K14411
RNA-binding protein Musashi
Organism
dpz
Daphnia pulicaria
Pathway
dpz03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
dpz00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
124316266
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dpz03019
]
124316266
Messenger RNA biogenesis [BR:
dpz03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
124316266
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
PHM7_cyt
NID
Motif
Other DBs
NCBI-GeneID:
124316266
NCBI-ProteinID:
XP_046638061
LinkDB
All DBs
Position
12:760425..787886
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AA seq
493 aa
AA seq
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MDNMDAHSQSQHGDNTTEVPNDPGKMFIGGLSWQTSAEGLREYFSKFGDVTEVMVMKDPT
TRRSRGFGFVTFADAASVDKVLASAPHELDGKKIDPKVAFPRRAHPKMVTRTKKIFVGGL
SAPSTVDDVKGYFEQFGRVEDAMLMFDKQTNRHRGFAFVTFESEDVVDKVCEIHFHEINN
KMQVECKKAQPKEVMLPVNAARGRAATLRAGYDLVWSLGALQEGLPAAYAAAYAGRGYPG
YASFGLPYPAGYPSYGYFPAAAAGAGGPANGMAGGGGVGGPGGGGGGGGGGGGGGGGAGG
SNTSGGLGGGEVSVSQHRNGPASAGQPTGAGGATYYDYTGAHGHHNGGVGAGPAAFHPRG
HHHHLDHQHNPHQAANMGNSPLLRDAYTGRSAMISSYPQSYVQQSQVGGRSFPPSLAAGL
GGHGHGGHHNPNASPGPAGDGGLYDGSLPGYTAAAVAAAAAAAGSHQTALARLLSNSFTQ
GTLIPTHYTNGYH
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atggacaacatggatgctcactcgcagtcgcagcatggcgacaacaccaccgaagtaccc
aacgatcctgggaaaatgtttatcggaggtctcagttggcagacgagcgccgaaggcttg
cgagaatatttcagcaaatttggcgacgtgacggaagtgatggtcatgaaagatcccacc
acccgtcgatccaggggtttcgggttcgtgacgttcgccgacgccgcctcggtcgacaaa
gtgctggcctcagccccgcacgagctcgacggcaagaagatcgaccccaaagttgcattc
cctcgccgggctcaccccaagatggtgacccggacgaagaagatcttcgtgggcggactt
tcggctccatcgaccgtcgacgacgttaaaggctactttgagcaatttggacgggtggaa
gacgccatgttgatgttcgacaagcaaaccaaccgacacaggggtttcgcctttgtgacg
ttcgagagcgaggacgttgtggacaaggtctgcgagattcacttccacgagatcaacaac
aagatgcaggtggaatgcaagaaggcgcaacccaaggaggtgatgctgcccgtcaacgcg
gcccgcggacgtgccgccaccctgcgagccggctacgatttggtctggtccttgggcgca
ctgcaagaaggactaccagctgcctacgccgctgcttacgctggacgtggttacccgggc
tacgccagttttggactgccttatccagccggttatccaagttatggatactttccggcc
gccgctgccggagctggtggtccagctaatggaatggccggcggcggaggcgtcggcggt
cctggaggtggtggtggcggaggaggtggtggcggaggcggtggcggtggcgcaggcgga
agcaacactagcggaggcctcggcggaggcgaagtttctgtgtcgcagcaccgcaatggt
ccagccagtgccggccagccgacgggagccggcggagccacgtattacgattacacgggc
gctcacgggcaccacaacggtggcgtcggggccggtccggccgccttccatccgcgcggc
caccaccaccacctcgaccaccagcacaatcctcatcaggccgctaacatgggcaattcg
cctttactccgcgacgcctacacaggccgttcagcaatgattagcagttacccgcagagt
tacgtccagcagtcgcaagtgggcggccgctcgttcccgccttcgctggccgctggactc
ggcggccacggacacggcggccatcacaaccccaacgcttcgccaggaccggccggcgac
ggcggactctacgacggatcgctgcccggatacacggcggcggccgttgcagccgccgct
gcagccgctggatcacatcagacggccctcgccaggttgttgtcaaattcattcacgcag
ggcaccctgattccgacccactacaccaacggctaccattaa
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