Daphnia pulicaria: 124316356
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Entry
124316356 CDS
T08670
Name
(RefSeq) hypoxia-inducible factor 1-alpha-like
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
dpz
Daphnia pulicaria
Pathway
dpz04137
Mitophagy - animal
dpz04140
Autophagy - animal
dpz04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
dpz00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
124316356
04137 Mitophagy - animal
124316356
04148 Efferocytosis
124316356
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dpz03000
]
124316356
Transcription factors [BR:
dpz03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
124316356
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GFIT
Motif
Pfam:
PAS_11
bHLH_HIF1A
PAS_3
PAS
PAS_9
PAS_4
HLH
bHLH_NPAS4
Motif
Other DBs
NCBI-GeneID:
124316356
NCBI-ProteinID:
XP_046638209
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Position
12:1184899..1187210
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AA seq
392 aa
AA seq
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MGSRSFYNTATKFARIRKSEKRKEKSREAARYRRSQEVETFNDLANLLPISSSLTSQLDK
ASIMRLTIAFLKVQSLLDNSVQELFSMLNENQCSMADACWPQALGGMLLALSSKGDIVYL
TENVTQELGLLQMDLIGQSIYDYCHPCDHDELREILALRPDGDPARSFCLRFKSALMAKK
RSKINQKVVPYKVMNCSGRIILSTESNIRLDYSQDKSYVDEYDLEDLTDDDLDSENDVKS
SSSTNHFLVLIVDPIPHPSCTKTPLAGYSFLTKHTLDMKYTSVDEKIYTFLGYTPEDLKG
RSAYELHHAQDNETVLKNYKAMFAKGQIQIPPYRFLAKQGGYAWVQTQATLVVYGQNRHF
RTEAVVCVHTCLSEIQDSHQILQAQSSADGPV
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atgggttctcgatccttctataataccgcgactaaattcgcccgaattagaaaatcagag
aagcgcaaagagaaatcacgcgaagctgcacgatatcgtcgcagccaggaagtggaaact
tttaacgatttggcaaatctactgccaatatccagcagcctcacctctcagttggacaag
gcttccatcatgaggcttaccatcgcttttctcaaagtgcagtccctactggacaacagt
gtgcaagaactgttcagtatgttaaatgagaaccaatgttcgatggctgatgcttgctgg
ccacaagcccttggtggcatgttattggcgctatcctccaagggggatattgtctacctg
actgagaacgtgacgcaggaacttggtcttttacagatggatttgattggacaaagcatt
tacgactattgccatccgtgcgaccatgatgaactccgggaaatccttgccctccgtccc
gatggcgatccagcgcgctccttttgcctccgcttcaagtcggcgttaatggccaaaaag
cggagtaaaatcaaccaaaaagtcgtcccatacaaagttatgaactgttcgggacgcatt
atactgtcgacggaatcgaacattcgactcgactattcacaagacaaatcttacgtggac
gaatacgacctagaagacttgaccgacgacgatttggactcggaaaacgacgtcaagtcc
tccagcagcacgaaccattttttagttttgattgtagatccgatcccgcacccatcctgc
acgaaaaccccattagctggttacagttttctcaccaaacacactttggacatgaagtac
acttctgtcgacgaaaagatttacacatttttgggatacacgccggaggatttaaaaggt
cgttcagcgtacgaattacatcatgcgcaagacaacgaaactgttttgaaaaactacaaa
gccatgttcgccaaagggcagatccagattccgccctatcgattcctggccaaacagggt
ggttatgcttgggtgcagactcaagccactttggtggtttacggccaaaatcgacatttc
agaacggaggcggttgtatgcgtccacacttgtctaagtgaaattcaggatagccatcaa
atcctacaagcgcaatcatcagccgatggcccagtttag
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