Daphnia pulicaria: 124318419
Help
Entry
124318419 CDS
T08670
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm8
KO
K12627
U6 snRNA-associated Sm-like protein LSm8
Organism
dpz
Daphnia pulicaria
Pathway
dpz03018
RNA degradation
dpz03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dpz00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
124318419
09123 Folding, sorting and degradation
03018 RNA degradation
124318419
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dpz03019
]
124318419
03041 Spliceosome [BR:
dpz03041
]
124318419
Messenger RNA biogenesis [BR:
dpz03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
124318419
mRNA degradation factors
5'-3' decay
Lsm complex
124318419
Spliceosome [BR:
dpz03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
124318419
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
DUF150_C
Motif
Other DBs
NCBI-GeneID:
124318419
NCBI-ProteinID:
XP_046638783
LinkDB
All DBs
Position
1:complement(26775549..26776155)
Genome browser
AA seq
96 aa
AA seq
DB search
MASTLDSYVNRSVCVITSDGRNFIGILKGFDQTINLIIDDSHERVFSSTQGVEQVQLGLH
IIRGDNVVLIGEIDNELDSRLNLSEIRAEPLAQIHH
NT seq
291 nt
NT seq
+upstream
nt +downstream
nt
atggcatcaacgttagattcttacgttaatcgttccgtatgtgttatcacgagtgatggg
aggaattttattggtattcttaaaggattcgatcaaaccatcaacctaatcattgacgac
agtcatgagagagtgtttagttctacccaaggagtcgagcaagtccaactgggactgcac
atcatcagaggagacaatgtagttttaattggggaaattgataatgaacttgattccaga
ctcaatttatcagaaataagagcagaaccattagctcaaatccaccattaa
DBGET
integrated database retrieval system
