Daphnia pulicaria: 124320241
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Entry
124320241 CDS
T08670
Name
(RefSeq) protein trachealess-like
KO
K09098
neuronal PAS domain-containing protein 1/3
Organism
dpz
Daphnia pulicaria
Brite
KEGG Orthology (KO) [BR:
dpz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dpz03000
]
124320241
Transcription factors [BR:
dpz03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
124320241
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_11
bHLH_HIF1A
PAS_3
PAS
PAS_4
PAS_9
HLH
SR-25
SLATT_1
Motif
Other DBs
NCBI-GeneID:
124320241
NCBI-ProteinID:
XP_046638977
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All DBs
Position
1:40689382..40698410
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AA seq
1044 aa
AA seq
DB search
MAGYALGLCGRAAATAAGIRDHFSADESSSASWMVLPPYSHHQYPGGPGSLTAAAAAAAA
MAGTLVGHASMGHHHSAVADYSALASSLQQQQQQQQQQQHQQQQQQQQQQRRSPLSSAAY
THSCILEMRKEKSRDAARSRRGKENYEFYELAKMLPLPPAITSQLDKASIIRLTISFLRL
KDFSSNGDPAWIKESLSSISSANSNSSSNVTSSTGSSSASGSSSSSSNKANKGNSRSRSH
QHNQHQQQQQQHPHHQMQLQHHQQHNSIPANIHVELFDQHQGTHILQSLDGFAFSLGSDG
RFLYISETVSIYLGLSQVEMTGSSVFDYVHTADHAELAQQLGLTLATNQTHQSASSSATS
SSQQLPPSPASGTGSVDDGNSCMNPDVTSLMSLESNSAYQGLDRSFCIRMKSTLTKRGCH
FKSSGYRVVMVLCRLRPQSQAYTAGKSGVGQPSSGPQGQNQPVPLLGMIAMAIALPPPTV
HEVRLEPDMFVTRLAFDLRIIHCEPRIAELLEFVAEDLTGRSLYTLCHVEDVRLLRKAHT
DLMHKGQVMTPYYRILNRHGGFTWIQSCATVVCNSKNGDEQSIVCVNYVLSRTEMKNLVV
DQCQLESAPIIQIKPTIFKTDHGASDVLHSSPDGSSSESSESLPKSGTTLIDPHRSSVPS
SEQSRPSSEVEVEVVTAPPEESVSSGMRTSRGPSGRHHHHRSAKRKYEDLVSVPSATDSS
MIGLDSNNQHHSTDNSNSNESASIQDQQNPNTLTDHQSEVDVARWKRLYAGAMENESLQD
RDLDGNGLNGNTTDFSTDALLSNGKPRSTIQWIGAPPVPSGSSSSAATAAALSVPSLLRQ
LYASRESVIRANVHAAAAAAAGRTPSGYFSNGETLPTPPTGVNGGNDYPGDVFPPTSSHS
YHSAATGSFLPEYLPAMTPPSSVSPRDAAAGALFAAEASLRHSAYSGVGSAESSYSANPT
QPLALKPHHHVHYGHGSIEHHHHAHHHHNSGGSHHQYASVQPLVSADAGQFYSHTPSGFH
LYHPQVSKSSSASSVNNSATWYPN
NT seq
3135 nt
NT seq
+upstream
nt +downstream
nt
atggccggttacgctctgggcttgtgcggaagagccgccgccaccgccgccggaatccgc
gatcatttcagtgctgacgagtcttcgtccgcctcttggatggttctgccgccatattcg
catcatcaataccctggcggtccaggaagtttaacggcagcggcggccgccgccgctgcc
atggccggaaccctggtcggtcacgccagtatgggacaccaccactcggccgttgcggat
tactccgcattggcttcgtcgctccagcagcaacagcagcagcagcagcagcaacaacac
cagcaacagcagcagcaacaacagcaacaacgtcgctcacctctctcctccgctgcttac
actcattcatgtatattggagatgcgtaaagagaaatcacgagatgcggcgcggtcccgt
cgcggcaaagaaaattacgaattttacgaactggccaagatgttacctcttccgccggcc
atcacttcccaactggacaaggcgtccatcattaggttgactatatcattcctccggctg
aaggatttctccagcaacggcgacccggcctggatcaaggagtcactttcgtcaatctca
tccgccaattcaaattcctcgtcaaacgtaacgtcgtccacagggtcatcgtcggcatca
ggatcctcttcctcatcatcgaacaaggccaacaaaggtaacagtcgttcgagatcccac
caacataatcaacaccagcagcagcagcagcagcatccgcaccaccaaatgcagctgcag
catcatcaacaacacaactcgataccggccaacattcacgtcgagttgttcgaccagcac
caaggcacgcacatcttgcagagtctggacggcttcgctttttccctgggctccgacgga
cgattcctctacatctccgaaacggtgtccatctacttgggcctgtcacaggtcgagatg
accggtagcagtgtcttcgattacgtccataccgcagatcacgccgaattggcccaacaa
ctgggccttacactggccactaatcagacccaccagtctgccagttcttctgcgacaagc
tcgtctcaacaactgccaccgtcgcctgcttctggcactggaagtgttgatgatggaaac
tcttgcatgaatcctgatgtgacttcgctgatgagtcttgagagtaattcggcctatcag
ggccttgaccgttccttctgcattcgaatgaaatcgacactaacgaaacgcggctgccac
tttaaatcgtccggctatcgggtggtgatggttctctgtcgacttcggccacaaagccaa
gcgtatacagccggtaaatccggagttgggcagccgagtagtggcccgcaaggccagaac
caaccggttcctttactcggaatgattgctatggctattgccctaccaccgcctaccgtt
cacgaagttcggcttgagccggacatgtttgttacgcgactggcattcgatttgaggatc
attcactgtgaaccaaggattgccgagctcctggaattcgtcgctgaagatctgacaggc
aggagtctttatactttatgtcatgtggaagatgtccgcctattgcgtaaagcccacact
gatttgatgcataaaggacaggtgatgacaccctactaccggatcctaaatcgtcacgga
ggattcacctggattcaatcttgtgctacagtagtttgtaactcaaagaacggtgacgaa
cagagcatcgtctgcgtcaactacgttctcagccgaacggaaatgaaaaatctggtagtg
gatcagtgccagctggaatcggcgcccatcatccaaattaaaccaaccattttcaaaacc
gatcacggtgcgtcggacgtcctccatagttcgccggatgggtccagttccgaaagctcg
gaatctttaccgaaaagcggaacgactttgatcgatccgcatcgatcgtccgtgccgagc
tccgaacagagtcggccatcttccgaggttgaagtagaggtcgttacggctccaccggaa
gaatctgtttcgtcgggaatgaggaccagtcgcggtccttccgggcgccatcaccaccat
cgatccgcaaaacgaaaatacgaagatctggtgtcggttccgtcagcgaccgacagttca
atgattggcctcgacagcaacaatcaacatcattctacagacaattcaaacagtaacgag
agcgcatccatccaagatcagcaaaatcccaacacattgactgatcaccaaagcgaagtc
gacgtggctcgctggaagaggctttacgctggtgccatggaaaacgaatctcttcaggat
cgggaccttgatggaaatggactgaatggaaataccacagatttcagtaccgatgcactt
ctttcaaacggtaagccacgatcgactattcaatggatcggcgctccgccagtgccgtcg
ggttcgtcctcgtcagctgcgacggccgctgccctgtcggttccgtcgttgctccgccag
ctctacgccagcagggagagcgttatacgcgccaacgttcacgcagctgcggccgcagcg
gccggacgcactccgtctggctatttttccaatggagaaacgctgccgactccacctacc
ggcgtcaacggtggcaatgactatcccggtgacgtcttcccgcctacctcttctcactct
taccactccgcagccaccggaagctttttaccggaatatctgccggccatgacacctccg
tcgtcagtttcgcctcgcgacgcagccgctggcgctcttttcgccgccgaggcttcgtta
cgtcattcggcgtacagtggtgtgggttcggcggagtcttcctactctgccaatccgaca
caaccactggcattgaagcctcaccatcacgtccactatggccatggttccatcgaacat
caccaccatgcccaccaccatcacaattcaggcggatcccatcatcagtatgcttccgtc
cagcccctggtgtccgccgacgcgggccagttctattctcatacaccttccggcttccac
ctctaccatccgcaggtgtccaagtcctcgtcagcgtcttcagtcaacaattcagccaca
tggtatcccaactaa
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