Daphnia pulicaria: 124320311
Help
Entry
124320311 CDS
T08670
Name
(RefSeq) ran GTPase-activating protein 1-like
KO
K14319
Ran GTPase-activating protein 1
Organism
dpz
Daphnia pulicaria
Pathway
dpz03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
dpz00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
124320311
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dpz03019
]
124320311
Messenger RNA biogenesis [BR:
dpz03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
124320311
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RanGAP1_C
LRR_6
Sigma70_ner
Motif
Other DBs
NCBI-GeneID:
124320311
NCBI-ProteinID:
XP_046639094
LinkDB
All DBs
Position
1:complement(40448658..40451424)
Genome browser
AA seq
593 aa
AA seq
DB search
MNGAVTKFNGDSETNNLNAKEEIVDFSGKGLKLDTEADAQPIVNAIQAAKGLTGLILEGN
TLGVEAAKAIAKALESKPTFQRALWKDAFTGRLKDEIPKALSFLGGGLILAKANLIELDL
SDNALGPVGMEGLVQFLKSPVCYSLKCIRLNNNGLGIYGGRMLAQALNDCLKASKEAGSP
LSLKTFIVGRNRLENEGAIALSEFFKAVGTLEEVQMPQNFIRHPGILALASALVYNPALK
ILNFNDNTFTWRGSQAVAEALPKWQQLSVINFGDCLIRTKGAEFLAKALSSGHEHLKEVY
MDHGEINLSGAKLLANSLKNKKMLKICDLNGNQFGEEGCQELKDIFGGLGEKVLLSLSDD
EGEPSSEEGESEQEEEEEESGDEEKEEKEEKEVEKSLDHVSAYDTLHQLNANLAQLTANE
VIPSTVEALLAAPTLARFNGLGDQKSSLILQHVDRLIAAKPDALFAVYAEVIMKVSSTVN
LRSEISSVENVQQSVDAILKAAFEKAKSMDKMSVLDNTLLVYMGILKSEDKQFRPTWPLS
GFFLILERILTVDPNNIPLSTLQSLQTFFTQPHPTFDIYKEESDRLKKILNKF
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
atgaatggggctgtgactaagtttaatggagactctgaaaccaataatttgaatgcaaaa
gaagaaatagtggattttagcgggaaaggactcaagttagatacggaagccgacgcccaa
cctattgttaatgcaattcaggctgcaaaaggtttgacgggtctcatccttgaaggaaac
actcttggtgttgaagccgccaaggctattgccaaagcattagaatccaaaccaaccttc
cagagagcactgtggaaagatgcttttactggtcggttgaaagatgaaattccaaaagct
ttgagtttcttaggaggaggactcattttggctaaagctaacttaattgagttagatttg
agtgataatgcattaggtccagttggtatggaaggtcttgttcagtttttgaaaagccct
gtctgctattctctaaaatgtataagattaaacaataatggccttggaatttatggtgga
cggatgcttgcccaagctttaaatgactgtcttaaagccagtaaagaggctggttctcca
ttgagtctcaaaaccttcattgttggaagaaatcgacttgaaaatgaaggagcgattgct
ctgtcagaatttttcaaggcagttggaaccttggaagaagtccagatgcctcaaaatttt
ataagacatcctggtattctcgcattggccagtgcgcttgtttataatcctgccctgaaa
attcttaactttaatgataacacgttcacctggagaggatcacaagctgttgcagaagct
cttccaaaatggcagcaattgtcggttataaactttggagactgtttgatccgtaccaag
ggggctgagttcctcgccaaggcattgtcatccggtcatgagcatttaaaggaagtctat
atggatcatggcgaaatcaatttgagtggagcaaagctattggctaattctttaaaaaac
aaaaaaatgcttaaaatatgtgatctaaacggtaatcagttcggtgaagaaggatgtcag
gagctcaaggatatcttcggtggcttaggtgaaaaggttttgctgagtttaagcgatgat
gaaggtgaaccaagcagcgaggaaggagaaagtgaacaagaggaagaggaggaagagagt
ggcgacgaagagaaagaagagaaagaagagaaagaagtagaaaaatctctcgatcatgtg
tctgcttatgacactttgcatcaacttaatgctaatctggctcagctaactgcaaacgaa
gtcattccgtcgacagtggaggcactacttgctgcacccactttggctcgcttcaatggg
ttaggtgaccagaaaagctcattgattcttcaacatgtcgaccgtttgatagctgccaag
cccgatgcattatttgccgtttacgctgaggtcatcatgaaagttagctcgaccgtcaat
ctgagatcggagatatcttcagtcgaaaatgttcaacagtccgttgatgcgattcttaaa
gcggctttcgaaaaggctaagtcaatggataagatgtctgttcttgataacacactgcta
gtgtacatgggtattctaaagagtgaagataaacaatttcgacccacctggcctctgagc
ggattctttttgattctggaacgcatcctcaccgttgatcccaataacattccactcagc
actctacaatctttgcaaaccttcttcacacagcctcatccaacttttgacatttataaa
gaagaatccgataggttaaagaaaattctgaacaagttttga
DBGET
integrated database retrieval system
