Daphnia pulicaria: 124320356
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Entry
124320356 CDS
T08670
Name
(RefSeq) RNA-binding protein Musashi homolog 2-like isoform X1
KO
K14411
RNA-binding protein Musashi
Organism
dpz
Daphnia pulicaria
Pathway
dpz03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
dpz00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
124320356
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dpz03019
]
124320356
Messenger RNA biogenesis [BR:
dpz03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
124320356
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
Nup35_RRM_2
NID
PHM7_cyt
Motif
Other DBs
NCBI-GeneID:
124320356
NCBI-ProteinID:
XP_046639164
LinkDB
All DBs
Position
1:41429850..41443103
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AA seq
464 aa
AA seq
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MLSVGNANIFPAHFGGLSAALAAGMPVVTGAGGQLAVGHMPGSAAAAAAAAAAAAAVAAG
LMPGNEMNSPSPDMFTTVRTGMDSNSNGSAGRGMKTDVGMSGLALDQSSSSGRSTPTDLP
HNKLFVGGLSWQTSADKLREYFGQYGTIIDVQVLKDPLTQRSRGFGFITFAEASSVDRVL
AVPAHTLDGKKIDPKHATPKNKGKATPSSKTKKVFVGGVSQDTSADEVKAYFNQFGRVEE
AVMLMDQQTKRHRGFGFVTFESEDVVDRICEIHYHTIKNKKVECKKAQPKEAILASTTTA
LLAAKRSVLLNGLGVAGLAPGVAHVQQSAAGQGAAQQFLAAQAAQVQAAVAAHQQQAAQA
QSAAAAAGYGKLLASYPALASYRYSPYSLPGAAQGNAQAAAAAAAAAAAAAASSGHHHHH
HAMSTASPAAQQAAAYQGYSLANVDMSSFQGVDWSQIYGMGMYV
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atgttgagtgtaggtaacgccaatatcttcccagctcatttcggtggtttgtctgctgcc
ttagcggcaggtatgcctgttgtcactggagccggtggacagttggccgtcggtcacatg
ccaggatcggctgctgctgctgctgccgctgctgctgctgcagccgccgttgcagctgga
ctcatgcccggaaacgagatgaattcgccatcgcccgacatgttcacaaccgtcagaacg
gggatggatagcaatagcaacggttctgccggccgcggaatgaaaacggatgtcggaatg
agcggactggccttggatcagagcagctcttccggtcgctcgactccgaccgacctgccg
cacaacaagctctttgtgggcggtctcagctggcaaacgtcggccgacaagctgcgcgag
tactttggccagtacggcaccattatcgacgttcaggtcctcaaggatcctctcactcag
agaagccgaggctttggcttcatcaccttcgccgaagcgagcagcgtggatcgcgtgctg
gccgtccctgcgcacacgctcgacggcaagaagatcgacccgaaacacgcgacgcccaag
aacaaaggcaaagcgacgccttcatccaagacgaagaaggtcttcgtcggtggcgtcagt
caggacacgtcggccgacgaagtcaaggcctatttcaatcaatttggacgcgtcgaggag
gccgtcatgctgatggaccagcagacgaaacgtcaccgcggattcggattcgtcacattc
gagagcgaggacgtcgttgatcgcatctgcgagattcactaccacaccatcaagaacaag
aaggtggaatgcaagaaagcccagcccaaggaggccattctggcctcgaccacaacggcc
ctcctggctgccaaacgtagcgtgcttctcaatggtctcggcgtggctggattggctccg
ggagtggctcacgttcaacaatcggctgccggacagggagccgcccagcagtttttggcc
gctcaagcggctcaagtccaggctgccgttgcggcccatcaacagcaggccgctcaggct
cagtcggccgctgctgccgctggctacgggaaactcttggccagctatccggcattagcc
agctaccgctacagtccttattcactacccggcgctgcccagggtaacgcccaggctgca
gccgcagcagcagccgccgccgccgccgctgccgcttcttccggtcaccaccatcaccac
cacgccatgtcgaccgcttctccagccgcacaacaggcggccgcctaccaaggatacagc
ctggccaacgtggacatgtccagttttcagggagtcgactggagccaaatctacggaatg
ggaatgtacgtctag
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