Daphnia pulicaria: 124320380
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Entry
124320380 CDS
T08670
Name
(RefSeq) general transcription factor IIE subunit 1-like isoform X1
KO
K03136
transcription initiation factor TFIIE subunit alpha
Organism
dpz
Daphnia pulicaria
Pathway
dpz03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
dpz00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
124320380
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dpz03021
]
124320380
Transcription machinery [BR:
dpz03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIE
124320380
Prokaryotic type
Archaeal type
TFE
124320380
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIE_alpha
TFIIE-A_C
Cas12f1-like_TNB
Zf-C2H2_ZNF451_C
Motif
Other DBs
NCBI-GeneID:
124320380
NCBI-ProteinID:
XP_046639204
LinkDB
All DBs
Position
1:complement(40160626..40162595)
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AA seq
422 aa
AA seq
DB search
MDDGYVHEVPSSLKQLARLVARAFYTIEDALIIDMLVRNPCMKEDDIADLLKFERKMLRG
RISTLRNDKFLQTRLKMETVDGKSQKVNYFYINYKIFVNIVKYKLDHMRKKMETSERDAT
SRASFHCPCCKKNFTDLEADRLFNPADPSGEFKCNFCGAVVVEDESAIPKTDSRQLMARF
NDQMEPLYKLLREVEDVKLAPALLEPEPTDISHLQRDADGKPKSRGAMGENWSGEATRGG
VFRLDEQRVDVTIGDNAVVKKGEVRKEAPIWMRESTVDNEAATSANDNIAGPAIIDEMEL
PTLSTEKNRNQEDIMSVLMELEKPTTKAAVPADSSDDEAAARSLLEQITPATNTIQRQVQ
YDSDVELMDSDSEEEVPMVRVGNLEFPVHEVPSEQVARMTPSEKDAYVQLHQEYMERMGY
LD
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atggatgacggatatgtccacgaagtaccgagcagcttaaagcagttggctcgactggtt
gccagggcattctatacgattgaggacgctttgattattgacatgcttgtcagaaatcca
tgtatgaaggaggatgacattgcagacttgttaaaatttgagcgtaaaatgttgagaggt
aggatttcaaccctacggaatgacaaatttcttcaaacacgcttgaagatggaaacagtg
gatgggaaatctcagaaagttaactacttttacattaattacaagatttttgtcaatatc
gtcaaatacaaattggaccatatgagaaagaagatggaaacttctgaaagagatgccaca
agcagagcaagtttccactgtccgtgctgcaaaaagaatttcactgatttggaagctgac
agactatttaatcctgctgacccgagtggggaattcaaatgcaatttctgtggtgcagtg
gttgttgaagacgaatcagccataccaaagacagattcacggcagctcatggctcggttc
aacgaccaaatggagcctttgtacaaattgctaagagaagttgaggacgtgaaactggcc
ccagccttgcttgaaccagaaccgactgacatttctcatctgcaaagggatgccgatgga
aaacccaaatccaggggagccatgggcgaaaattggtcgggagaggcaaccagaggaggt
gttttccgactggatgaacaacgcgtcgacgtcactatcggtgataatgctgttgtcaaa
aaaggagaggttcgcaaggaggcacccatatggatgagagaaagtaccgtcgataatgaa
gctgctaccagcgccaatgacaatattgctggacctgcgatcattgacgagatggagcta
cctactctctctacggagaagaatcgcaaccaagaagacattatgtccgttcttatggaa
ctcgaaaaaccaactacaaaggccgctgttccagccgattcaagtgatgacgaagcggcc
gcaagatctcttcttgaacagattactccggctaccaatactatccaacgccaagtgcaa
tatgacagtgatgtcgagctgatggacagtgactcggaagaagaagttcctatggtgaga
gttggaaacttggaattccctgttcacgaagttccatcggaacaggttgcccgcatgacg
ccctccgaaaaggatgcctacgtccagctccaccaagaatacatggaaaggatgggctac
ctggattaa
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