Daphnia pulicaria: 124320666
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Entry
124320666 CDS
T08670
Name
(RefSeq) probable ATP-dependent RNA helicase DHX35
KO
K13117
ATP-dependent RNA helicase DDX35 [EC:
5.6.2.6
]
Organism
dpz
Daphnia pulicaria
Brite
KEGG Orthology (KO) [BR:
dpz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dpz03041
]
124320666
Enzymes [BR:
dpz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
124320666
Spliceosome [BR:
dpz03041
]
Complex C
Other components
Complex C specific factors
124320666
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
HA2_N
DEAD
AAA_22
Cas3-like_C_2
nSTAND3
AAA_19
AAA_30
DUF6798
T2SSE
AAA_29
Motif
Other DBs
NCBI-GeneID:
124320666
NCBI-ProteinID:
XP_046639483
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All DBs
Position
1:complement(19230631..19234879)
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AA seq
691 aa
AA seq
DB search
MFVKPNSDVSDLREERPDFNSDESTNFVYNPHRSQSIENQRRRLPIFENRDQVLYLLETH
QFLILIGETGSGKSTQVPQYLLESGWGCDGTVIAVTQPRRVAALSLAARVADEMGTSLGQ
SVGYSIRFDERISEKTKLKFVTDGMLLREMLTDPLLKKYSLIMIDEVHERSLNTDILLSL
LKKICKKRPELRLVISSATLDAEELKNYFELNKNKKSRLERSNPAQYQVGSTVIMNVVGR
CYPVDIFYAQDPVPDYLKASVDTVIKISIREPSGDVLVFLTGYEEVETAVRLLKEHANTI
ADSANIDKLSVLAMHGGLSNEDQLQVFQRSPPGRRKIVVATNVAEASITIPGIVYVIDCG
FVKLKWFNADTQTDALVVVPISQASAQQRAGRAGRIRAGKVYRLYTEDYFYTLNRFTPPE
VQRSNLSSAVLQLKALGVDDVIHFDFPSPPPARHLAIALELLFALKAIDTSGRLTDAGLK
IAEFPVEPIMSKMLLSSKDFKCSMEIASIVAAMQVQALFYYPTRGQESIKARVARRKFDA
QEGDLITYLNVVSAFAKHGECSRWCQSNYLNKKSLKRVVLLRDQLIKLLQRLGIRISSAE
GELEPVLRCIASSFFPNTAYLHPSGQYKTVLADIVLQVHPHSILFTEEKAPWVVFGEVLQ
TTQLFMRDITVIDQIWLEELAPHYFQKVTER
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atgtttgttaaacctaactctgatgtgtcggatttgagggaagaaagaccagatttcaac
agtgatgaatcaactaattttgtttataatcctcatcgttcgcagtctatagagaatcaa
cgaagaagactgccaatcttcgaaaaccgtgaccaagtgttatacttgcttgaaacacac
cagtttcttattctaattggtgaaacaggaagtggaaaaagtactcaggttccccaatat
ctcctagaatctggatggggatgtgatggtacagttattgctgtaactcaacctcgcaga
gtagctgcattaagtcttgcagcaagagttgcagatgagatgggaacatctttaggtcaa
tcagttggctactcaatcagatttgatgagcggatttcagagaaaactaagttgaagttt
gtcactgatggtatgctcttaagggaaatgcttactgatccattgctgaaaaagtatagc
ttgatcatgattgacgaagtccatgagagatccttaaacactgatatacttcttagtttg
ttaaagaaaatctgtaagaaacggcccgaactgcgtcttgttatatcttctgccactttg
gacgctgaagagctaaaaaactactttgaactgaacaagaataaaaaatctcgtttggaa
agatctaacccggctcaatatcaagtggggtctacagttattatgaatgttgttggcagg
tgttatcctgttgacattttttatgctcaagatccggttcctgattacttaaaagctagt
gtcgacactgttattaaaatatcaattcgggaaccttcgggtgatgtattagtttttcta
actggctatgaagaagtggaaactgcggtgcgacttttaaaagaacatgcaaacacaata
gctgattccgcaaacatagataaattgtctgttttagcgatgcatggaggattatcgaat
gaagaccagttacaagtgtttcaacgttctccacccggaagaagaaaaattgtggttgcg
acaaacgtagctgaggcttctattactattcctggaattgtttatgtcatcgattgtgga
tttgtgaaattgaagtggttcaacgcggatactcagaccgatgctctagttgttgttccc
atttctcaagcttctgcccaacaacgagctggtagagctgggcggattagagctggaaaa
gtctaccggctgtacactgaagattatttttacactctgaatcgatttacaccaccggaa
gtgcaacgaagtaatttgtcgtccgcagttttgcaattaaaagctctaggtgttgacgat
gtcattcattttgattttccaagccccccgccagctcgacatcttgctatagccttagag
ctattgtttgccttaaaagccattgatacatctggacgactaacagatgcaggattgaag
atagcggaattcccagtggaacctataatgagcaaaatgctactttcttcaaaggatttc
aagtgttcaatggaaattgcatcgattgtagcagcgatgcaggtccaagctctcttctat
tatccaacacgaggacaagaaagtattaaagctcgcgtcgctagacgaaaatttgatgca
caagaaggagatctaattacttaccttaatgtggtatctgcgtttgccaaacatggagag
tgttccagatggtgtcaatcaaattacctcaataaaaagtcgctcaagcgggtagtcctg
ttacgtgaccaattaattaaattgcttcagcggctaggcatacgaatttcatcagctgaa
ggagaacttgagcccgtacttcgttgcatagcatcgagctttttcccaaacacagcatac
cttcatccaagtggacaatataaaacagtgttagccgatattgttcttcaagttcatcca
cactccattttgtttacggaggagaaagcaccatgggttgtttttggtgaggttttgcag
accacccaactattcatgagagatatcacagtaatcgatcaaatttggttggaagaatta
gcacctcactactttcaaaaagttaccgaacgatga
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