Daphnia pulicaria: 124320946
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Entry
124320946 CDS
T08670
Name
(RefSeq) pre-mRNA-splicing factor RBM22-like
KO
K12872
pre-mRNA-splicing factor RBM22/SLT11
Organism
dpz
Daphnia pulicaria
Pathway
dpz03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dpz00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
124320946
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dpz03041
]
124320946
Spliceosome [BR:
dpz03041
]
Complex B
Other components
Prp19-related factors
124320946
Complex C
124320946
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
STL11_N
zf-CCCH_RBM22
RRM_1
RRM_YTH1
zf_CCCH_4
Torus
zf-CCCH_2
Nup35_RRM_2
zf-CCCH
zf-CCCH_4
RRM_occluded
zf-CCCH_10
SpdB
zf-CCCH_12
zf-CCCH_3
zf-CCCH_PARP12
Motif
Other DBs
NCBI-GeneID:
124320946
NCBI-ProteinID:
XP_046639815
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All DBs
Position
1:complement(33524858..33526576)
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AA seq
414 aa
AA seq
DB search
MALSKSSNTYGRTSWEDSEFPILCPTCLGDNPYVRMMKEKFGSECKICVRPFTTFRWCPG
ARMRFKKTEICQTCAKLKNVCQTCLLDLEYGLPIQVRDQALNIKDNIAKSDVNKEYFIQN
AEKQLSATDHGVPGAAGGPGKSHPPSDLLMKLARTAPYYRRNLPHICSFWVKGECKRGEE
CPYRHEKPTDPDDPLADQNIKDRYYGTNDPVAEKLMRRAATLPRLDAPEDKSITTLYVGN
IGEKMLEKELRDHFYQYGEIRSITIVSRQQCAFVTYVTRSAAELAAEGTFNKLIIQNRRL
VIRWGKSQGKQNVPGTTNTEAGARFEPVPGLPRALPHPEELEHNFFNLAPTSNAYPSPYP
QYPPSTYPLIAPPPPNPTPNQAELPVFLAESQQGIHYPSQDPTRLGAINKTRQT
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atggcgctgtcgaaatcatcaaacacttatggacgtacaagttgggaagattcggagttt
ccaattctctgcccaacatgtctaggagacaacccttacgttcgaatgatgaaggaaaaa
tttggcagtgaatgtaagatttgtgtcagaccttttacaaccttcagatggtgccctggt
gcccgtatgcgcttcaagaaaacagaaatttgtcagacttgtgcaaaacttaaaaatgtc
tgccagacttgcttattagatcttgaatatggacttcccattcaagtcagagaccaagca
cttaacattaaagacaatattgcaaaatctgatgtgaacaaagaatattttattcaaaat
gctgagaaacaactttctgcaacagatcatggtgtacctggagctgctggtggtccagga
aaatctcatcctccatcagatcttctgatgaaattggcacgcacagcaccatattatcgt
aggaacttgccacacatttgttctttctgggtgaaaggtgaatgcaaaagaggagaagaa
tgtccttaccgtcatgaaaaacccactgatccagatgatccattggctgatcagaacatt
aaagatcgttattatggcaccaatgatccagtggcagaaaagctcatgcgtcgggctgcc
actcttcctcgtttggatgctcctgaagataagtccattaccactttgtatgtgggtaac
attggagagaagatgttggaaaaagaactacgagatcatttttatcagtacggtgaaatt
cgatccatcactatcgtttcacgacagcaatgtgcttttgtaacatacgtcacccgctca
gctgcagaattggctgccgaaggaacctttaacaaactaattattcagaatcggcggctt
gttattcgttggggtaaatctcaaggcaaacagaatgttcctggaacaacaaatactgaa
gctggagctcgttttgaacctgttccgggtcttccccgagctttgccacatcctgaagaa
ttggagcataactttttcaatttagctcctacaagcaatgcatacccatctccttatcct
caatatccaccatccacatatccattgatcgctccaccaccaccaaaccccacaccaaat
caggcggaacttccagtatttcttgccgaaagtcagcaaggcatccattacccttctcag
gatccgactcgtcttggcgcgattaataagacacgacaaacataa
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