Daphnia pulicaria: 124321122
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Entry
124321122 CDS
T08670
Name
(RefSeq) long-chain-fatty-acid--CoA ligase 4-like
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
dpz
Daphnia pulicaria
Pathway
dpz00061
Fatty acid biosynthesis
dpz00071
Fatty acid degradation
dpz01100
Metabolic pathways
dpz01212
Fatty acid metabolism
dpz04146
Peroxisome
Module
dpz_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
dpz00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
124321122
00071 Fatty acid degradation
124321122
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
124321122
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
dpz01004
]
124321122
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
dpz04147
]
124321122
Enzymes [BR:
dpz01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
124321122
Lipid biosynthesis proteins [BR:
dpz01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
124321122
Exosome [BR:
dpz04147
]
Exosomal proteins
Exosomal proteins of breast milk
124321122
Exosomal proteins of breast cancer cells
124321122
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
DUF3531
Motif
Other DBs
NCBI-GeneID:
124321122
NCBI-ProteinID:
XP_046639983
LinkDB
All DBs
Position
1:complement(11967523..11970982)
Genome browser
AA seq
708 aa
AA seq
DB search
MTSLKPIEKAVLFLIQCIFHLYTIITWPVYFLVQKPWKAKANHNKLKSVALMHGDDFVLH
RSVSDISDVHVRFIQDKIDTMEKVFRFAVRQHGQKAAVGTREILAEEDEIQPNGRIFKKF
VLGSYQWRTFTQMDNEAESFGRGLRELGINAKENVVLFAETRAEWLIASNGCMKQNMPLV
TLYATLGEDALIHGINETEVSCVVTSQELLPKFRNILPCTPNVTVLVVFEDAIKPLDLSG
YGDVVKILPYREVIRLGEMSSKTGLLPKPEDTAFVMYTSGSTGPPKGVLMSHENVMSSML
AYTNVAVIFESDVYMAYLPLAHVLELIGESMCMLYGIPIGYSNPLTMTDNSSKIKRGSKG
DASVLKPTIIACVPLILDRIYKSIQEKVESGSAVKKFLFNLAMQYKLDWFQRGYDTPIIN
SVLFRPVRAILGGRIRFILAGGAPLAPETHRCLRAALCCPVLQGYGLTETCSATTMMDFY
DRSTGITGGPLSCCDIKLVNWDEGNYRVTDRPYPRGEIHVGGPNVAVGYFKQPEKTKEEF
YEENGRRWFRTGDIGEFRPEGNLQIVDRKKDLVKLQYGEYVSLGKVESELKTCSLIDNVC
VYADPTKLFVVALVMPNPDHLKSISMKSGISWNNIEDICLNSQMEKVYLTEIQKHGLKCR
LEKFEIPQAIKLISEIWTPDMGLVTAAFKLKRKNIQDRYQLLIDRMYS
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
atgacaagcctaaagcctattgaaaaggcagtattgttccttatccagtgtatatttcat
ttatacacaatcatcacatggccagtctattttctagtccaaaagccgtggaaagctaaa
gctaatcacaacaagttaaaatcagtggcgttaatgcatggagatgattttgttttgcat
agaagtgtgtctgacatcagtgatgtacatgttagatttatacaagataagattgacaca
atggaaaaagtcttcaggtttgctgttcgtcagcacggtcagaaagcagcagttggtaca
agagaaattttggctgaagaagatgagattcaacccaatggcagaattttcaaaaagttt
gtgttaggaagttatcagtggagaactttcactcaaatggataatgaagcagaaagcttt
ggccgtggtcttagagaattgggtatcaatgctaaagagaatgttgttttattcgctgaa
actcgagctgaatggcttatagcttcaaacggctgtatgaagcaaaatatgcctcttgtt
actttgtatgcaactcttggagaagatgccttgatccatggcatcaatgaaactgaagtt
tcatgcgtcgttacgtctcaggaattattgccgaaattcaggaacattctaccctgcaca
ccaaacgtcaccgttctggttgtatttgaggacgcaataaaaccgttagatttatctgga
tacggggatgtcgtaaaaatccttccctatcgcgaagttattaggctaggagagatgtca
agcaaaacaggtttattgcctaaacctgaggacacagctttcgtcatgtacaccagcggc
tccacaggtccgccgaaaggagtgctaatgagtcatgaaaatgtaatgagctccatgtta
gcttacactaatgttgccgttattttcgaaagtgacgtttacatggcatatcttccactg
gctcatgttcttgaactaattggagagagtatgtgtatgctatatgggattccaattggt
tactccaaccctttaacaatgaccgataactcaagtaagattaaacgaggaagcaaaggt
gatgcatcagtgttaaaaccgactataattgcctgcgtcccactcatcctcgaccgtatt
tacaaaagcattcaagaaaaagtagaaagtggttctgctgtgaaaaaattcctcttcaat
ctggctatgcaatacaagcttgattggtttcagcgtggatacgacacacctattatcaat
tccgtgttgtttcggccagttcgagccattttaggaggtcgaatacgatttattttggct
ggtggtgctccacttgcccctgaaactcacagatgcttgcgagctgctctttgctgtcct
gtcctgcagggatatggactgacggaaacgtgctcagcaactactatgatggatttttat
gaccgatcgactggtataactggagggccgttaagttgctgtgatataaaactagtgaac
tgggatgaaggcaactacagagtgacagatcgcccttatcctcgtggtgagattcatgtt
ggtggacccaatgttgcggttggatatttcaaacaaccagaaaaaactaaagaagagttt
tacgaagaaaatggaagacgttggtttcgtactggagatattggtgaattcagaccagaa
ggaaacttacaaattgttgatcgcaaaaaggatttggtcaaactgcaatatggagagtat
gtatctttgggtaaggtcgagtctgaactgaaaacttgttccttaatagacaatgtatgc
gtctatgccgatcctactaagctgtttgttgtcgcattagttatgccgaatccagaccac
ttgaagtcaatttccatgaaaagcggcatttcgtggaacaatattgaagacatttgcctt
aatagtcagatggaaaaagtgtatcttactgaaattcaaaagcatggtttgaaatgtcgg
ctagaaaagtttgaaataccacaagctatcaaactaatcagtgaaatttggacaccagac
atggggcttgttaccgccgcttttaagttaaaaagaaaaaacatccaagaccgatatcag
ttgctgatcgatcgaatgtattcctaa
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