Daphnia pulicaria: 124324024
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Entry
124324024 CDS
T08670
Name
(RefSeq) sodium- and chloride-dependent GABA transporter 1-like
KO
K05034
solute carrier family 6 (neurotransmitter transporter, GABA) member 1
Organism
dpz
Daphnia pulicaria
Pathway
dpz04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
dpz00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
124324024
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dpz02000
]
124324024
Transporters [BR:
dpz02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
124324024
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Gene cluster
GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
124324024
NCBI-ProteinID:
XP_046640316
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Position
1:complement(39018411..39029417)
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AA seq
639 aa
AA seq
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MAEMSEKSKSNKERFGDDEGESNGLLPAASSKGPTVSAATPAIVESHSSLVPVKTDDNLP
ERGEWSSKIEFIFSTVGYAIGLGNVWRFPYLCYKNGGGAFLVPYLITILFAGVPMFFLEC
ALGQYLGIGGLGVWKVTPFFKGVGYAAVINAAWLNIYYIVILAWCLFYFLVSLSKVLPWG
TCDNWWNTETCVSAYSRQNLTSYIEGNTTFYNLNGTIYAAANLTDPVKEYWERRVLMISD
GLEDIGELRWELVGTLAAVWFMCYFCIWKGVKWTGKVVYFTALFPYFLLTVLLIRGVTLP
GAAEGIAFYLTPDLSRLRDPEVWIDAVSQIFFSYGLGVGSLIALGSYNQYNNNVYRQSLI
VCAINSGTSFFSGFAIFSVIGFMAKEQNKPISEVAASGPGLTFLAYPSAVLQLPISPLWS
CLFFLMFITLGLDSQFCTLEGFITAVVDEWPRLLRRRKEIFIAVVCFVSFLIGLSCVAQG
GMYVFQLFNTYACSNLVLLWLIFFECIAISWGFGVDRFYDGIKDMIGYYPTRWFKFCWCF
TTPLICIGVFIFYLAEFTPLTYLDYHYPWWGHFIGLLLALSSMICVPAYMAYVVWRQEGN
LMEKLRRTMDEIRPKISLEEIRNWHVKPATPSNEAVTAV
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atggctgaaatgtcggagaaatccaagtccaacaaggagcgatttggcgacgacgaaggt
gaatccaacgggctccttccggccgccagcagcaaaggacccaccgtcagcgccgctacg
cccgccatcgtcgagtcccattcgtcgctggtgcccgtcaaaacagacgacaatctgcca
gaaagaggcgaatggtcgtcaaagatcgagttcatcttctccaccgtcggatacgccatc
ggattgggaaacgtctggcgatttccgtacctgtgttacaagaatggcggcggagctttt
ctggtgccgtatttgattacgattctcttcgccggtgtccccatgttttttctggagtgc
gccttgggtcagtacttgggaattggcggcctgggagtctggaaagtcacgcccttcttc
aaaggtgtgggctacgccgccgtcatcaacgccgcatggctcaacatctactacattgtc
atcttggcttggtgcctcttctacttcctcgtgtctctcagcaaagttctcccgtggggc
acgtgcgacaactggtggaacacggaaacgtgcgtgagcgcctactcgcgccagaacctc
acctcctacatagagggcaatacgaccttctacaacctcaacggcaccatctacgcggcc
gccaacctcaccgatcccgtcaaggaatactgggagcgtcgcgttctcatgatctcggac
gggttggaggacattggcgaacttcgctgggaactggtgggaacgttggccgctgtttgg
ttcatgtgctacttttgcatctggaaaggagtcaaatggacgggcaaggtggtttacttc
acggccctgttcccttacttcctgttgacggtgttgctcattcgtggagttactctaccc
ggcgccgccgaaggtatcgctttctacctgactccggatttgtcaaggcttcgagacccg
gaggtttggattgatgccgtgtctcaaatcttcttctcttacggtctgggagtcggttcc
ctcatcgctttgggaagctacaatcaatacaacaacaacgtctacaggcaatcgctgata
gtctgcgccatcaattccgggacgagtttcttctccggattcgccattttctccgttatc
ggtttcatggccaaggaacaaaacaaaccaatcagcgaagtcgcagcttcaggtcctgga
ctgacatttttggcgtatccgtcggctgtgttgcagctaccgatttctcctctatggtcg
tgcctctttttcctcatgttcatcactctgggattggattcgcagttttgcactctggag
ggcttcataacggcggtggtggatgagtggcctcgcttgttgcgccgacgcaaagagatt
ttcatcgccgttgtttgtttcgtttctttccttattggactctcctgcgtcgctcaggga
ggcatgtacgttttccagctcttcaacacttacgcctgcagtaatctggtgctcctctgg
ctcatcttcttcgagtgcatcgccatttcgtggggattcggagtcgatcgcttctacgat
ggaatcaaggatatgattggatattatccgactcgttggttcaaattctgctggtgtttc
accactccactcatttgcattggcgtctttatcttttacctggccgagttcacacctctg
acttacctggactaccactacccgtggtggggtcatttcatcggcttgctattagccctc
tcgtccatgatttgcgttccagcttacatggcctacgtcgtgtggaggcaggagggcaac
ctgatggagaaacttcgtcgcacgatggacgaaattaggcccaagatcagtttggaggag
atacgtaactggcacgtgaagcctgcgacgcccagcaatgaggctgtgacggccgtctag
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