Daphnia pulicaria: 124325926
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Entry
124325926 CDS
T08670
Name
(RefSeq) chromatin assembly factor 1 p55 subunit
KO
K10752
histone-binding protein RBBP4
Organism
dpz
Daphnia pulicaria
Pathway
dpz03082
ATP-dependent chromatin remodeling
dpz03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
dpz00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
124325926
03083 Polycomb repressive complex
124325926
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
dpz03036
]
124325926
Chromosome and associated proteins [BR:
dpz03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
124325926
Histone modification proteins
HAT complexes
HATB complex
124325926
HDAC complexes
Sin3A-HDAC complex
124325926
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
124325926
PRC2.2
124325926
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
124325926
Heterochromatin formation proteins
Other heterochromatin formation proteins
124325926
Chromatin remodeling factors
NuRD complex
124325926
NuRF complex
124325926
NuRF complex (fruit fly)
124325926
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
CAF1C_H4-bd
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_TEP1_2nd
Beta-prop_EML_2
WDR55
EIF3I
WD40_WDHD1_1st
Beta-prop_WDR75_1st
Beta-prop_EML
WD40_MABP1-WDR62_2nd
WD_LRWD1
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR19_1st
WD40_RFWD3
Beta-prop_DCAF12
ANAPC4_WD40
Beta-prop_RIG_1st
eIF2A
Beta-prop_SPT8
WD40_MABP1-WDR62_1st
Beta-prop_IFT140_1st
NBCH_WD40
MIOS_WD40
Beta-prop_IFT122_1st
Beta-prop_DCAF4
Motif
Other DBs
NCBI-GeneID:
124325926
NCBI-ProteinID:
XP_046640452
LinkDB
All DBs
Position
2:4726805..4728746
Genome browser
AA seq
427 aa
AA seq
DB search
MADKDGEPFDEAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGK
DYSVHRLILGTHTSDEQNHLLIASVQLPNEDAQFDASHYDNDKGEFGGFGSVSGKIEIEI
KINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSRPDPSGECHPDLRLRGHQKE
GYGLSWNPNLNGHLLSASDDHTICLWDINASPRENRVLDAKTVFTGHTAVVEDVAWHLLH
ESLFGSVADDQKLMIWDTRSNNTSRPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVA
LWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDA
EDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDEEPETPAS
ELETPTN
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atggcagataaagatggagagccctttgatgaagcagtggaagaacgcgtcatcaacgag
gaatacaaaatttggaagaaaaatactccatttttgtatgatttggttatgacacatgct
ctggaatggccttcacttacagctcaatggcttcctgatgttacaaggcctgaaggcaaa
gactactcagtgcatcgtctcatccttggtactcacactagcgatgaacaaaatcacctc
ttgattgcatctgtccagcttcctaatgaggatgctcagtttgatgcttcacattatgac
aatgataaaggagagtttggaggctttggatcagtgagtggtaagattgaaattgagatc
aagatcaaccatgaaggagaagtcaacagggctcgctacatgccccagaatccttgtgtg
attgccactaaaacaccttcatctgacgtcttggtctttgactacacaaaacatccttct
cgccctgatcctagtggagagtgccaccctgatttacgtctgagaggacaccagaaggaa
ggttacggtttgtcttggaatccaaaccttaatggtcacttgctgtcagcatctgatgat
cacaccatttgcttgtgggatattaacgcatcgccgagagagaatcgtgttctcgacgcc
aaaaccgtattcactggccacacagcagttgtagaagatgtcgcttggcacttgcttcac
gagtccttgtttggttccgttgccgatgatcagaagcttatgatttgggatactcgcagc
aataacaccagccggccctcccataccgtggatgctcatacggctgaagtgaactgtctg
tcattcaatccttactccgaatttattttagctaccggatctgcagacaaaactgtagct
ctttgggatttgagaaatcttaaactcaaattacattcgttcgagtcgcacaaggatgaa
atctttcaagtccaatggtcaccgcataatgagactattttggcttcgtctggcaccgac
cgacgcttgcatgtctgggacttgtccaaaattggagaagaacaatccaccgaagatgcc
gaagatggccctccagaattgttgttcattcacggtggtcatacggccaagatctctgat
ttctcctggaacccgaatgagccctgggtcatctgctccgtctctgaggataacatcatg
caagtttggcaaatggctgaaaatatttacaacgacgaggagcctgagacgccagcctca
gaactggaaacccctactaattaa
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