Daphnia pulicaria: 124325946
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Entry
124325946 CDS
T08670
Name
(RefSeq) valine--tRNA ligase-like isoform X1
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
dpz
Daphnia pulicaria
Pathway
dpz00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
dpz00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
124325946
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
dpz01007
]
124325946
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dpz03016
]
124325946
Enzymes [BR:
dpz01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
124325946
Amino acid related enzymes [BR:
dpz01007
]
Aminoacyl-tRNA synthetase
Class I (U)
124325946
Transfer RNA biogenesis [BR:
dpz03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
124325946
Prokaryotic type
124325946
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
tRNA-synt_1g
tRNA-synt_1_2
DUF6376
Fez1
Motif
Other DBs
NCBI-GeneID:
124325946
NCBI-ProteinID:
XP_046640481
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All DBs
Position
2:6190341..6194447
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AA seq
989 aa
AA seq
DB search
MWKRAPKQLFPLSYRSCATINLPKNVNSDMPKAYSPALVEGKWYEWWESNSFFKQHRPLS
SSEKFSMVLPPPNITGTLHIGHALTCAIQDSLVCWNRMNGKDTYWFPGCDHAGIATQAIV
EKNLKSQNLTREQLGRDKFVEEIWKWKHEKQDIIYQQLKGLGSTLNWDKAVFTMDPKLCY
AVNEAFIRLHQKGKIYRKESLVNWSCQLRSAISDIEVDHQSIDGPQGISVPGYDKPVTFG
YIYKFDYKLSDSDERIAVSTTRPETILGDMAIAVNPEDVRYSKYIGRSVVHPIRHDKLPI
IADSMVDQEFGTGAVKVTPAHDQKDYEIAVRHGIEMLSIFDNQGIANKNCSEFSGLPRFE
LREKMIQFLRDNNLLNSILPHQMSVPRCSRSGDVIEPLLRPQWFVDTQEMAQRAMEAVKS
GNLKIHPPHFENVWFEWLGNIRDWCISRQLWWGHRVPAYRFAGENDATWIAAHNFQQAVE
LAKHQNLPFSTVSQDEDVLDTWFSSSLFPFSVCGWPEQTIDLKNLFPLNLMETGHDILFF
WVARMVMMSLELTGELPFKEVLLHGIICDSQGRKMSKSLGNVIDPLDIVYGSSLKCLEDQ
LESSLKKGHLSSKEFEKAMTEKRVTFPDGIPQTGSDALRFTLCSYNVKSHFINLDMATLK
KNRLFCNKIWQATRFLFQLLDETFPQKSSNEIYLRKDPIHSSLINQWIMNGLDKMVSQVN
SAMSRYDFHHATDALYTFLYGSLCDVYLEAIKPLTGVDKQESAHVLAICLDVALRCLAPF
MPFISEELYQRLHKKLADHGIQSPRSMSILIAKYPVKDEFAIWKNAELEQNVDLILRVVT
ELRNVKVEYGLAKSKPEAILICSSENILSKSDQYSKLMATIGGLESVTICEERRLQNSKE
KVWVSRTVDSCSVHVNIAGMVDLRAELKKNQDKMRKLVDKLSRMEANMNSSSYQLSAPSH
VQDIHRQKADSLRNEINSLKLYAQKLDEL
NT seq
2970 nt
NT seq
+upstream
nt +downstream
nt
atgtggaaacgggcccctaaacaactatttcccttatcatacagatcttgtgctacaata
aatttaccaaaaaatgtcaatagtgatatgccgaaagcttattcgcctgccttagtagaa
ggaaagtggtatgaatggtgggagtctaactcattttttaagcagcataggcctttatca
tccagtgaaaagttttccatggttcttcctccaccaaacattactggtactctccatatt
ggacatgccttaacatgtgccattcaggattctctagtttgctggaatagaatgaatggg
aaagatacatactggtttccaggatgtgaccatgctggaatagctacacaagctatagtt
gagaaaaatttgaaatctcaaaacctgacacgtgagcagctgggtcgtgacaaatttgtt
gaagaaatttggaagtggaaacatgaaaaacaagacatcatttatcagcagttaaaagga
ttaggttcaaccttgaattgggacaaagcagtctttacaatggatccaaaactttgttat
gcagttaatgaagcgtttattcgacttcaccaaaaaggaaaaatttatcggaaggaaagc
ctagtgaattggtcttgtcagttgcgatctgccatttcagacatcgaagttgatcaccag
tcgattgatgggccacagggaatatccgtcccaggatatgataaaccagtcacgttcggc
tatatttataagtttgactacaaattgtctgactccgatgaacgtatcgcggtgtccacg
actagaccagaaactattttgggtgatatggcaatcgcagtcaatcctgaagacgtacgc
tacagcaaatacatcggtagatcagttgttcatccaattcgccacgataaattacctatt
attgctgattctatggttgatcaggaatttggaacaggtgctgtaaaggttactccggca
catgatcaaaaagattatgaaatagcagtgcgtcatggtattgaaatgcttagcattttc
gacaatcagggaatagcaaataaaaactgcagcgaattcagcggactacctcggtttgaa
ctgagggaaaagatgatacaatttttacgcgataataacctgttgaacagtattttacct
caccaaatgagtgtaccacggtgtagtcgatctggcgatgtaattgaaccccttttaaga
ccgcagtggttcgttgacacacaagagatggcgcaaagagccatggaagcggtcaaaagt
ggcaatttaaaaattcatcctcctcattttgaaaacgtctggtttgaatggctcggcaat
attagagattggtgcatctcgcgtcaactttggtggggtcatcgtgtacctgcttatcgt
tttgctggagaaaatgatgcaacttggatcgcagcgcataatttccagcaagctgtcgaa
ctcgccaaacatcaaaatcttcccttttcaacagtcagtcaagatgaagacgtactcgat
acgtggttttcttcgtcgctctttcctttttcagtctgtggatggcctgaacaaacgatt
gatctcaaaaatttattcccacttaatttgatggaaacaggacacgacattctatttttc
tgggttgctcgtatggtaatgatgagtctggaactaaccggagagttaccattcaaggaa
gttcttttgcacggcatcatttgcgatagtcaagggcgcaaaatgtcaaaatctttgggg
aatgtgatcgatccgttggatatagtttatggttcatccctaaaatgcttggaagatcaa
ctggaatccagcctcaaaaaagggcatctttcttcaaaagaatttgaaaaggctatgaca
gaaaagagggttacatttcctgacggaataccacaaacgggatctgacgctttgagattt
accctttgctcctacaatgttaaaagtcattttattaacctggacatggcgactttaaag
aaaaaccgccttttttgcaacaaaatatggcaggctactcggtttttgtttcagcttttg
gatgaaacatttccgcaaaaaagctcaaacgaaatttatttgcgaaaggatccgatccat
tcgtccctcataaatcaatggattatgaatggcctggataaaatggtcagccaagtcaac
agtgcaatgtcgagatacgatttccatcacgccacggatgcactctacacttttttgtat
gggagtctttgcgatgtttacctagaagctatcaaacctttaactggggtggataaacaa
gaatctgcccatgttcttgcaatttgcttagatgtggcacttcgctgtttggcccctttt
atgcctttcattagcgaagagctttatcagcgcctgcataagaaacttgccgatcatgga
atccaatcgccacgatccatgagcattcttattgctaaatatcccgtgaaagatgagttt
gctatatggaaaaatgccgagcttgaacaaaatgtcgatttaatcttacgggtcgtcaca
gaattacgaaatgtgaaagtggagtacggattagccaagtcaaagccagaagccatcctc
atctgctcatccgagaatattttaagtaaaagcgatcagtattccaagcttatggcaact
attggtggtctggaatctgtgactatttgtgaggagcggcgtctacaaaattcgaaagaa
aaagtctgggtatctcgtacagttgatagttgctctgttcatgtcaatattgcagggatg
gttgatttgcgagcggagcttaagaaaaatcaagataagatgaggaaacttgtcgataaa
ctttctcggatggaagctaatatgaactcatcttcataccaactgagtgctccatctcat
gtgcaagacattcaccgacaaaaagctgattcgttgcgaaacgaaattaacagtttaaaa
ttatatgcccaaaagttagacgaactgtaa
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