Daphnia pulicaria: 124326029
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Entry
124326029 CDS
T08670
Name
(RefSeq) afadin-like isoform X1
KO
K05702
afadin
Organism
dpz
Daphnia pulicaria
Pathway
dpz04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
dpz00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
124326029
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
RA
DIL
PDZ
FHA
PDZ_6
PDZ_2
Yop-YscD_cpl
Motif
Other DBs
NCBI-GeneID:
124326029
NCBI-ProteinID:
XP_046640551
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All DBs
Position
2:complement(12095445..12103904)
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AA seq
1882 aa
AA seq
DB search
MPAMMEFEDRKWRDREALKHIIGQWNANRLDLFSLSEPNEEFEFHGVMRFYFQDAGQKIA
TKCIRVSSTGSTQAVIETLIEKFRPDMKMLHMTEYALYEIHPNGAEERCLGVDEKPLLVQ
LNWHKDDREGRFLLRRADEKSTLPAQQPPEESSFRRKLSKREKRNAKKENKLRKLKSSDN
DGGGGQDCENGGKNGTVAEKLYTELPETSFTRSISNPEAVMRRRRQQKLERKLQLFRSKD
GGPDTGGTLKIYGESLCRDVPYKTLLLSVRETAAYVVREMLDKYALTREDPTNYCLVQVT
GSPPNQQQQQQTGNNNSEPPSEYILEDDECPLSILMNHTPGSGPVMFHVRRRPADSNSQA
ARRRKKKLSGSGGSQGGGGNANANSCGSGGGSVHRLTGVGDLSSPDQDPEQRTLPYLVEL
NPDGSEVRQGNQIRRHFVSPTVTEVGSERPAPPHPSSPISVPSIQLFGPGIHPRHCVLAH
TEGMVTLTPCSPQAETYVNGQRLCETTLLQHGCVIRFGRNAYQFRFIDPASEFRTPAAST
ALNYERFTGQPGGANRAVSTTPSASNLIPVSASAAAAAIVAPPPPPAGPVVVPGTDPILP
AVLELPEDVEDAFLHSLIPNLDTRQIVFRLAPTYSLYLMARYRASTHFRPELNPMERAQR
LTLTLSRVGAMMQAIVQERYADPPSLAFWMANASELLHFLKSDRHICAFSLDGQDLLAEA
VQIAFRNASVCLTAELLQSMPPMLSPPTSQQLAEGQPEQPEEEAATAQVLSVLSSTMGLL
RRCRVNAALTIQLFSQLFHALNAALFNRLVGLDSPRLPASASHHLLPPPGANLCSRQWGL
ALSRRLRRLEAWAERQGLELAADCHLARVMQAAHLLQSPKNTAEQLVETASSCFKLNSLQ
LRALLERYRPSPQDGEPANAIPPQLIQHIVRVAEGTADELQLADGRPLRLDEDSQLAVPF
LLPDDGYSCDVMRGIPTGLMEVLGPLQQAGLCRLTPQPTSSGLWTIYMGEGSTPVVAPQP
QQHPIRAPSVAGEAQAYAPQQQQQQQQQPELQLLQLRKASDSMGLSIVAARGTGQQQLGI
YIKSVVKGGSADIDGRLQAGDQLLSVDGYSLVGITQDRAAEILMRTSHTVRLEVAKQAAM
FHGLATLLSQPSPTSTVSRSTLSLNKMDPVQQQQQRRPPLPQTQQQQQQQQAFQERLVDW
DRPPTSHRMNSNSSPSLANINDPQQQQQAMGQGRPLQQMAPQLRNANSRSVPALHHNSEP
NVGMNQSQDGIHHFQTEQQQQQFYAQQQQQQQQRAMMNQRAMSAQLLSQPRYPNPPQQST
EPTSPTRSTAQQQLQQQQQATRSRSVQNLSAETQQQQQTRASATTLRARHPSDERQYQNI
ALYQQQQQQQQQHMQYPGGQGPRPQYAQQLPLPPPPPQQQQQQQQQPRGLLSPVSRTAPG
VVVPASVAHLRHPSMAQQQQSSDSPPPPPPPPVSTHPLVAAAAATGQQQQQQSPWEREEK
ERETAMRRQEAARQWMEEQIEELESLGLGNRTPKQEEQLRALRLEMEFRKRAMEAAEEED
DDDGEASGDRRGMLRLVQEDLERARQWRLEKQQQVQQPMPPPQQQQPPMTNGTNNNNTAT
VPDQERMRKIEAFQRKQRELEATQAAEERIIREAQRRKEEDIHRHQQMQQHQQQQQQQHW
RPTPGANIPIPPPSAMSGGQRLDGVIHQSSSMEMAQHVSSSTSTSSATTSTTTKRVSFFQ
ETTQSSDNKTPTREDPDAFILEAENMLANTPPKTSGSGVMGGGGGGGGSSIDQLLLTGVS
TPGVIGSQEVYRDPRLKRLAEQQQQQKTQLKPGPEKLTFQEKMKMFALESGEQATPKDKS
KISKAQREIELKPSPMSEKNSN
NT seq
5649 nt
NT seq
+upstream
nt +downstream
nt
atgcctgccatgatggagtttgaagacaggaagtggcgggacagggaggctctcaaacac
atcatcggtcagtggaatgccaaccgccttgacctgttctccctctcagaacccaacgag
gaatttgagttccacggtgtgatgcgcttctacttccaagatgcagggcagaagattgcc
accaagtgcatcagagtttcttccacaggctccacgcaggcagtgattgaaactctgatt
gagaaattcagaccagacatgaagatgctgcacatgacggaatacgcgctctacgagatc
caccccaacggtgcagaggagaggtgcctgggtgtcgacgagaaaccgttgctggtccag
ctgaattggcacaaggacgaccgcgagggccgtttcctcttgagacgggccgacgagaag
tcgactctgcctgcccagcagccaccggaagaatccagcttccgtcgcaagctctcgaag
cgggagaagcgcaacgccaaaaaggagaacaaactgcgcaagttgaagagttcagacaac
gacggaggcggcggccaggattgcgagaatggcggcaaaaacgggacggtggccgagaag
ttgtacacggaactgccggaaacgagttttactcgctccatcagtaatccggaagcggtg
atgcgtcggcggaggcagcagaaactggagcgcaaattgcagctctttcgctcaaaagat
ggcggccccgacactggcgggaccctcaaaatctacggggagagtttgtgccgtgacgtg
ccttacaagacgcttttgttgtctgtccgcgagacggcagcctacgtggtgcgagagatg
ctggacaagtacgcgctcacccgagaggacccgaccaattattgcctggtccaggtgacg
ggatcgccaccgaatcaacagcagcaacagcagacgggcaacaacaatagcgagccacct
agcgagtacattttggaagacgacgagtgtcctctctccattctgatgaaccacacgccc
ggctcaggtccggtcatgtttcacgtcaggaggcggccggccgacagcaattcgcaggct
gcacgtcgtcgcaagaagaaactcagcggaagtggaggaagccaaggcggaggaggcaac
gccaatgccaattcgtgtggctctggtggcggatccgttcatcgattgacgggcgtaggt
gatttgtcgtcgcccgatcaggatcccgagcaacgcactctgccctacttggtggaattg
aatccggacggaagcgaagtcagacagggcaaccagatacgacgccatttcgtttctccc
acagtcacggaagtcggatcagaacgaccagcacctccgcatccttcctcgcccatttcc
gttccgtcgattcaacttttcgggcccggaatccatccgcgccactgcgttctcgcccac
acggaaggcatggtgacgttgacaccctgcagccctcaagcggagacttacgtcaacggc
cagaggctatgcgaaacgactttgctccagcacggctgcgtcatccgcttcggccgcaac
gcctatcaatttcgcttcatcgatccggccagcgagttccgcactcccgccgcctcgaca
gcactcaattatgagcgcttcactgggcaaccgggcggtgctaatagggccgtttccact
acaccgtcggccagtaatttgatccccgtctcggcttcggctgctgctgcagccatcgtc
gctcctccccctccgcccgccgggcccgtcgtcgttcctggaactgatcccatcctcccg
gccgtcctggaactgcccgaagacgtcgaggatgcctttctccactctctcattccaaat
ttagacacgaggcagatcgtcttcagactggccccaacctattccctgtatctgatggct
cgctaccgagcctcgactcacttccggccggaattgaatcccatggaaagggcccagcgt
ctgactctgacgctgagtcgggtcggcgccatgatgcaggccatcgtccaggagcgctac
gccgacccgccctcgctggccttttggatggccaacgcctctgagctactccactttctc
aaatcggatcgacacatttgcgccttttcgctggatggacaagatttgctggccgaggcc
gtccagatcgccttccgcaacgccagcgtctgcctgacggccgagctgctccaatcgatg
ccgcccatgctgtcgccgcctacgtcgcaacagttggccgaagggcagccggagcagccg
gaagaagaagcggccaccgcccaggtcttgtcggtcctctcgtcgacgatgggcctgttg
cgccgctgtcgggtcaacgccgccctcaccattcagctcttttcccagttgtttcacgcc
ctgaacgcggccctcttcaatcgtctcgtcggcctggattcgccacgtttgcccgcttcc
gcctcgcatcatctcctgccacctccgggtgccaatctctgctctcgccagtggggcctg
gccctcagtcgacggctgagacgtttggaggcctgggcagagaggcagggactcgaattg
gccgccgactgtcacttggctcgagtgatgcaggccgcccatttgctgcaatcgcccaag
aacacggccgaacagctggtggagacggccagctcctgtttcaaactcaactcgctgcag
ttgagggccttgctggaacgttacaggccgtcaccgcaggatggagagccggccaacgcc
attccgcctcaattgattcaacacattgtccgggtggccgaaggaacggccgacgaactt
caactggccgacggccgtcccttgcgattggacgaggattcccagctggccgtccctttc
ctcctgcccgacgacgggtattcctgcgacgtgatgcgtggcatccccactgggttgatg
gaagtcttggggccgctccaacaggccggactatgccgtttgaccccccagccgacgtcg
tcgggattgtggactatttacatgggcgaaggatcgactccggtcgtcgcccctcaaccg
caacagcatcccatccgcgctccgtcggtggccggcgaagcccaggcgtatgccccccag
caacaacaacaacagcagcagcagccagagttgcagctgctgcagttacgcaaggccagc
gattcgatgggcttgagcatcgtggccgcccgtggcactggtcagcaacaacttggcatc
tacatcaaatctgtcgtcaaaggaggatcggctgatatcgacggacgtctgcaggccggc
gatcagttgctctcggtcgacggctacagtctggtgggcatcacgcaggatcgagccgcc
gagattttgatgaggacgagccacacggtccgtctggaagtcgccaaacaggcggccatg
ttccacggactggccactttgctgagccaaccgtcgccaacgtccaccgtgtctcgctcc
actttgtctctcaacaagatggacccggtccagcaacagcaacaacgtcgaccacctctg
ccccagacacaacagcagcagcaacaacaacaggcgttccaggagcgactggtcgactgg
gatcgtccgccgacgtcgcatcggatgaactccaacagcagtcccagtctggccaacatc
aacgacccccagcaacagcagcaggcgatgggccaaggccgtcctctccaacagatggcg
cctcaattgcgcaacgccaattcccggtcggtgccggccctgcaccacaacagtgagccc
aacgtgggcatgaaccagtcgcaggacggaattcaccactttcagacggagcagcagcaa
caacaattctacgcccagcaacagcagcagcaacaacagcgagccatgatgaaccaacgg
gccatgtcggcccagctcctctctcagccgcgttaccccaatcctccgcaacaatcgaca
gaaccgaccagtcccacccgctcgaccgcccagcaacaactgcaacaacaacaacaggcc
actcgctctcgttccgtccagaacttgagcgccgagacgcaacaacagcaacagacgaga
gcctctgccacaaccctgagagcccgtcatccgtcggacgagcgacaataccagaacatt
gccctgtaccaacaacaacagcagcaacaacaacaacacatgcaatatcctggtggtcaa
ggtcctcggcctcaatacgctcagcaacttccccttccaccccctcctccgcaacaacag
cagcagcaacaacaacaaccgaggggcttgttgagtccagtcagtcgaacagccccggga
gtcgtcgttccggcatcagtggctcatttacgtcacccgtcgatggcgcaacagcagcag
agcagcgactctcctccgccgccacctccgccgcccgtgtcgacccacccgctggtggcg
gccgccgcggccacgggccagcagcaacagcagcagagcccgtgggagagggaggagaag
gagcgtgagacggccatgcgccgccaggaggcggcccgtcagtggatggaggagcagatc
gaagagctggaatcgctgggcctgggcaaccggacgcccaaacaggaagagcaactcagg
gccctgcgactggaaatggaattccgcaaacgggccatggaggcggccgaagaagaggac
gacgacgatggggaagcctcgggcgatcgtcgcggaatgctccgcctcgtccaggaggat
ctggaacgggccaggcagtggcgactggagaaacagcagcaagtccagcagcccatgcct
ccgcctcaacaacaacagccgccgatgacgaacggaacaaacaacaacaacacagcgacg
gtgccggatcaggagcggatgcgcaaaatcgaagccttccagcggaagcagcgcgaactg
gaagcgactcaagcggcagaggagcggatcatccgagaagctcagcgccgcaaggaggag
gacattcaccgacaccagcagatgcaacaacaccaacaacagcagcagcaacagcactgg
agaccgacgcctggtgccaacattccgattccgccgccctcggccatgtcgggtggccag
cgattggacggcgtcatccatcagtcatcgtcgatggaaatggcccagcacgtttcttct
tccacgtcgacgtcgtccgccaccacgtcgacgacgaccaaaagagtttccttcttccag
gagacgacccagtcgtcggacaacaaaacgccaacacgcgaagaccctgacgcgttcatc
ctggaagcggagaacatgctggccaacacgccgcccaagacgtccggcagcggagtcatg
ggtggcggcggcggcggcgggggtagttccatcgaccagctgctgttgactggagtgagc
actccgggcgtgataggctcgcaggaagtgtaccgcgatcccaggctgaagcggctggcc
gagcagcagcaacagcaaaagacccaactgaaaccgggccctgagaaattgactttccag
gagaagatgaaaatgtttgccctggaaagtggcgagcaggccacaccaaaggacaagtcc
aaaatatccaaagcccagagagaaattgagctgaaacccagtccaatgagcgagaagaat
agcaattga
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