Daphnia pulicaria: 124326044
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Entry
124326044 CDS
T08670
Name
(RefSeq) DNA-directed RNA polymerase III subunit RPC2-like
KO
K03021
DNA-directed RNA polymerase III subunit RPC2 [EC:
2.7.7.6
]
Organism
dpz
Daphnia pulicaria
Pathway
dpz03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
dpz00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
124326044
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dpz03021
]
124326044
Enzymes [BR:
dpz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
124326044
Transcription machinery [BR:
dpz03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
124326044
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
Motif
Other DBs
NCBI-GeneID:
124326044
NCBI-ProteinID:
XP_046640582
LinkDB
All DBs
Position
2:11559176..11563914
Genome browser
AA seq
1135 aa
AA seq
DB search
MGESRKDIYNDLEKLLEPIKAVEEKWKLVPAFLKTKGLVKQHIDSYNYFINVEIKKIVKA
NEKVLSFADPTFYLKYLDIHVGKPDSIEDMHHSRLTTPHECRLRDMTYSAPVTVDIEYTR
GQQRVVRNGIAIGRMPIMLRSSNCTLAGILPAEMAKKNECPYDCGGYFIVRGNEKVILIQ
EQMSKNRMIVEQDRKGNMSCQVTSSTHGTKTRTNVIMNKGKYYLKQNSFQDDIPVVIAFK
AMGIVSDQEIVQMIGTDDHVMTSFAPSLEECVRASIFTQQQALNHLAKKMRQKRFFGGPK
KSPLDEAREALAETVLAHVPVVNFNFKAKAMYLALMIRRVIQAERDPTSVDDRDYYGNKR
CELAGSLISLLFEDLFKRMNFELKSIADKNIPKVKAAQFDVIKHIRTDTLTLGLENAIAT
GNWTIKRFRMERQGVTQMLCRLSYISGLGMMTRVNSQFEKTRKVSGPRSLQPSQWGMLCP
SDTPEGEGCGLVKNLALMTHITTEAEEEPIIKIAQNMGVEDINLFSGEEISDPSIYTVFL
NGNILGLVKDYLRLIRYFKLARRHGFVNAFVSIYPHFLTRSVYISCDGGRLCRPYIIVRQ
GRPAVTEHHMQELADSFRTFEDFIHDGLVEYLDVNEENDSNIAVYESDINEETTHLEIEP
FTLLGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGTIACNQRNRIDGLLYNLVYPHKPMVK
TRTIEMVNFENIPAGQNAMVAVMSYSGFDIEDATVLNKASLDRGYGRCIVYKNAKCALKR
YNNGTSDRVNGPMIDPVTKKPAWKHEIIDIDGFACVGQPVQPKQVLINKIMPTVSAVVVT
PGVPAAAAPLPEYRDVPITYKGPIPSYVEKVMFSSNAEEANIIKIQLRQTRRPEIGDKFS
SRHGQKGVTALVAEQEDLPFTELGICPDVIMNPHGFPSRMTVGKLIELLAGKAGLMEGKF
HYGTAFGGSKVQDVSEELMKHGFNYQGKECMTSGTTGEQLTAYIYFGPVYYQKLKHMVMD
KMHARSQGPRAILTRQPTEGRARDGGLRLGEMERDCLIAYGSSMLILERLMISSDAFNVD
VCNKCGLMGYFGWCHFCRSSASVSSLRIPYACKLLFQELQSMNIAPRLKLDKYFD
NT seq
3408 nt
NT seq
+upstream
nt +downstream
nt
atgggagaatctagaaaagatatttataatgacttggagaaattattggagccgatcaag
gctgtcgaggagaaatggaagttggtgccagcatttctgaagacgaaaggattagtaaaa
cagcacattgattcctataattactttatcaatgttgaaatcaagaaaatagtaaaagcc
aatgaaaaagttttaagctttgctgaccctactttctacctcaaatatttggatatccac
gtggggaaaccagactcgattgaagacatgcaccattctcgtctgaccacaccacatgag
tgcagactgcgagatatgacctattctgcaccagttactgtggatattgagtacaccaga
ggacaacaaagggttgtgcgtaatggaattgcaattggcaggatgccaatcatgcttagg
agttcaaactgcacactagcaggtattttacctgcagagatggccaagaaaaatgaatgt
ccgtacgactgtggtggatatttcatcgtccgcggaaacgaaaaagtgattttgattcaa
gagcaaatgtccaaaaatcgtatgattgtcgagcaggataggaaaggaaacatgtcctgc
caagtcaccagcagtacccatggaacgaagacgcgtaccaacgtaattatgaacaaagga
aaatactatttaaagcaaaatagttttcaagatgatattcctgtagtcattgcgttcaaa
gcaatgggcattgtgtcagatcaagaaatagtccaaatgatcggtacagatgaccatgtg
atgacttcgtttgcaccttcgttagaagagtgcgttcgagcgtctatatttacgcaacag
caagcattaaatcatttggcaaagaaaatgcgtcaaaaacgattttttgggggtccgaag
aaatcgcccttggatgaggctagagaagcccttgccgaaacagttttagctcatgttccc
gtcgttaatttcaactttaaagctaaagctatgtatttagccctgatgattcgtcgagtg
atccaagcagaaagagacccaacatcggtcgacgatcgcgattattatggaaataagcgt
tgcgagctggcaggatccctcatttctcttttgttcgaagatttgttcaaacgcatgaac
tttgagctgaagtcaatcgccgataagaatattccaaaagttaaagcagctcagtttgac
gtgattaaacatatacgaacagataccttaactctaggattggaaaacgccattgctacg
ggaaattggaccatcaaacgtttccggatggaaagacaaggtgtcactcaaatgctttgt
cgcctatcgtacatttctggccttggaatgatgactcgcgtcaattcacagtttgaaaaa
acacgtaaagtgtccggaccgcgttctcttcaaccatcgcagtgggggatgttgtgtcct
tccgacacccctgaaggagagggttgcggattggtaaaaaatttggctctgatgactcac
ataacaactgaagccgaagaagaaccaatcatcaaaattgcgcagaatatgggcgtcgaa
gatattaaccttttcagtggcgaggaaattagtgatccaagcatctacacagttttcctt
aatggtaatattctcggcttagtcaaggactacctgcggttaatccgttactttaaactg
gctcgtcgccacggattcgttaatgcgtttgtgtccatctacccgcacttccttactcga
tcggtttacatcagttgtgatggtggtcgtttgtgtcgtccttacatcatcgtcagacaa
ggaagaccagccgtaacggaacatcatatgcaagaacttgccgatagctttcggacgttt
gaggatttcattcacgacggattagtagaatatttggatgtaaatgaagaaaacgacagc
aacattgctgtctacgaatccgatatcaacgaagaaacgacccatcttgaaatagagccg
tttaccttgctaggcgtctgtgctggtctgattccgtatcctcatcacaatcagagtccc
cgtaacacttaccagtgcgccatgggaaaacaagcgatgggaactatcgcttgcaaccaa
cgaaatcgtatcgatgggcttctctacaatttggtttacccccacaagccgatggtcaaa
acccggacaattgaaatggtcaatttcgagaatattcctgctgggcaaaacgccatggtc
gctgttatgagctattctggtttcgatattgaagatgctactgttttgaacaaagcctct
ttggatcgaggttacggtcgctgtatcgtttacaaaaatgctaaatgcgccttgaagcgg
tacaataatggaacctcggatcgtgtcaacggtcctatgattgatccagtaaccaagaaa
cctgcctggaaacatgaaatcattgacatcgatggtttcgcttgcgttggtcaacctgtt
caacctaagcaggttttgattaacaaaattatgccgactgtttctgcggttgtcgttact
cctggagtgccagcagcagctgctccattgccggagtatcgagatgtgccaattacttat
aaaggtccgattccgtcatacgttgagaaagttatgttctcgtccaatgccgaagaggcg
aacattataaaaattcagttgagacaaactcgtcgacctgaaatcggcgacaagtttagt
agtcggcacggccaaaaaggagttactgcgcttgttgcggagcaagaagacttgccattc
actgagcttggaatttgcccggatgtaatcatgaaccctcacggttttccttctcgaatg
acagtgggtaagctaattgaactcttagctggtaaagcaggtcttatggaaggcaagttt
cactacggcacagcgtttggtggatccaaggtccaagatgtgagtgaagaattgatgaag
cacggattcaattaccaagggaaagagtgtatgacgtctggtacaacaggggagcaatta
acggcgtatatctatttcggaccggtttactatcaaaagttgaagcacatggtgatggac
aagatgcacgcacgttctcaaggacccagagccattcttactcggcagccgacagagggt
cgagcccgtgacggtggacttcgtcttggtgagatggaacgcgattgcctgatcgcatac
ggctcaagcatgctgattttggagcgtttgatgatttcgagtgatgcttttaacgtcgat
gtctgcaataagtgcggactgatgggttatttcggatggtgccatttctgccgatcaagc
gcttctgtctcctcgctccgcattccttacgcctgcaaacttctctttcaggagcttcaa
tccatgaacatagccccccgtcttaaactagacaagtactttgactga
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