Daphnia pulicaria: 124326076
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Entry
124326076 CDS
T08670
Name
(RefSeq) nuclear valosin-containing protein-like
KO
K14571
ribosome biogenesis ATPase
Organism
dpz
Daphnia pulicaria
Pathway
dpz03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
dpz00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
124326076
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dpz03009
]
124326076
Ribosome biogenesis [BR:
dpz03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
124326076
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
Nucleolin_bd
AAA_lid_3
RuvB_N
AAA_16
AAA_22
TIP49
AAA_5
AAA_14
AAA_2
NPHP3_N
AAA_33
AAA_28
RNA_helicase
Rad17
Mg_chelatase
AAA_17
nSTAND3
ABC_tran
AAA_3
AAA_18
TsaE
Vps4_C
NACHT
IstB_IS21
NB-ARC
ATPase
Parvo_NS1
AAA_7
Cytidylate_kin2
Zeta_toxin
Sigma54_activ_2
Pacs-1
Motif
Other DBs
NCBI-GeneID:
124326076
NCBI-ProteinID:
XP_046640645
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All DBs
Position
2:11689757..11693010
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AA seq
759 aa
AA seq
DB search
MSGGAGRNNRPASYYVDRALIPRVQRYLKENSHRTYIDIEEMADVLQRQYTDYGRKKKIP
FRNSVKQAYEDIRITLEAKDDGSDSDPYETARIAETPERNDTANESLRSMYSSNRTAEDS
KIDDIMVIDVLGEQEMAPPQSTPIKKKVVVKRKKVDPEAPSETKKKSKTVVFQSVISTTK
FSEVGGNEKSLKEVRKLILHMKHPEVYQHLGMSPPRGFLLHGPPGCGKTLLAHAIAGELE
IPFFKVAAPELVSGVSGESEEQIRFLFEQATSSAPCIIFIDEIDAITPKRETAQREMERR
IVAQLLTCMDDLSSRDRNIPVLVIGATNRPDALDPALRRAGRFDREISLGIPDLAAREKI
LKVVCKNLSLALDMDFKFLALNTPGYVGADMLALASEAGMIAVNRAFGRMESIYLATAEA
SPTPETTTEEKSWLWLCQQPEFGAEQLQGISITLDDFIAALKCVQPSAQREGFATVPDVT
WENVGALSHVRQELHLAILAPIRYEQHYEALGLSSPSGVLLCGPPGCGKTLLAKAIANEA
GINFISVKGPELLNMYVGESERAVRQCFQRARSSVPCVIFFDELDALCPRRSEHGHEGGA
SRVVNQLLTEMDGIESRRGVFLMAATNRPDIIDPAVLRPGRLDKILHVGFPTAEDRVDIL
RALTKNGTKPSLAADANLIDIGLDPRLDGYTGADLSSLVKESATQALQEFVFGRGEAGID
VELGNVCVHLRHFQAAITKIRPSVNEKDRKHYAGMSNRL
NT seq
2280 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggtggtgctgggaggaacaatagaccagcctcttattacgttgatcgggccctt
attcccagagtccaacgttacttaaaagaaaatagtcatagaacttatatagatatagaa
gaaatggctgatgtacttcaaaggcaatacactgattacggacggaagaagaaaattcct
tttcgaaactctgtcaagcaagcatatgaagacattagaataaccctggaagccaaggat
gatggcagtgattcagatccttatgaaaccgctagaatagctgaaacccctgagagaaat
gatactgccaatgaatccctgcgaagtatgtactccagtaaccgtacagcagaagattca
aaaattgatgacataatggtgattgatgtgctcggtgaacaagaaatggcaccaccacaa
agcacaccaataaaaaaaaaagttgttgtaaagagaaagaaggttgatccagaagcccct
agtgaaaccaagaaaaagtccaaaactgttgtgttccaatctgttatctctaccacaaaa
ttctccgaagttggcggcaacgaaaagtccctaaaagaagtgcgcaagcttattcttcac
atgaagcatccagaagtttaccaacatttaggaatgtcaccaccaagaggatttcttctt
cacggtccgccgggctgcggtaaaacgttgttggctcatgccatcgccggtgaactagaa
atcccttttttcaaagttgccgctcctgagctggtttctggtgtatctggtgagtctgaa
gagcaaatccgtttcctgtttgaacaagcgacgtcttctgctccgtgtataatatttatc
gacgaaattgacgccatcacaccaaaaagagaaacggctcaacgagagatggaacgaagg
attgttgcccagcttctcacctgcatggatgatcttagcagtcgagacagaaatattcca
gttttagtgattggtgctaccaacagacctgatgccttagatcctgccttaagaagagct
ggccgcttcgaccgagaaatatcacttggaataccagacctcgccgcaagagagaagatt
ctcaaagtggtctgcaagaaccttagtctagctttggatatggactttaagttcttggct
ttgaacacaccgggatacgtaggagcggatatgcttgccttggcttccgaggccggcatg
atagctgtgaatagagctttcggacggatggagtccatatatttggctactgcagaagcc
agcccgacaccagagacaacgacagaagagaaatcatggctgtggctttgccaacagccg
gaatttggggctgagcagcttcaaggcatttcaatcacgcttgatgattttatcgctgct
cttaaatgtgtgcagccttctgctcagcgtgaaggattcgctaccgtcccagatgttact
tgggaaaatgtgggggctctttcacacgtccgtcaagaactccacttggctattttggct
ccaattcgctacgagcaacattacgaagctttaggactctctagtccttcaggtgttttg
ctttgtggcccacctggttgcggcaaaactttgttggcaaaagccatcgctaacgaggct
ggaatcaacttcatttcggtcaaaggcccagaattactcaacatgtacgtaggagaatct
gaacgagcagtccgacaatgtttccaacgcgcccggagttctgttccgtgtgtcatcttc
tttgacgaactcgacgctctttgcccaagacgttctgagcacggccatgagggtggtgcc
agtcgcgttgttaatcagctgttgactgagatggacggaatcgaatcacgtcgaggggtt
tttctcatggctgccaccaatcggcctgatatcatcgatccagccgtccttcgacctgga
agacttgacaaaattctccacgttggattcccaacagccgaagatcgggtcgacattctc
agagctctcaccaagaatggtacgaagccaagtctagccgccgatgccaacttgatcgat
attggtctagatccaagattggacggttatacaggagctgatctctcctcgttggtcaag
gaatctgccacccaggccttgcaagaatttgtatttggtcgtggtgaggctgggatcgat
gtggagttgggtaatgtctgtgttcatctacgtcactttcaggctgccatcactaagatt
cgtccttcagttaacgaaaaggatcgcaaacattatgcaggaatgtccaatcggttgtga
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