Daphnia pulicaria: 124326091
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Entry
124326091 CDS
T08670
Name
(RefSeq) TBC1 domain family member 15-like
KO
K20168
TBC1 domain family member 15
Organism
dpz
Daphnia pulicaria
Pathway
dpz04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
dpz00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
124326091
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dpz04131
]
124326091
Membrane trafficking [BR:
dpz04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
124326091
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
PH_RBD
DUF5630
Motif
Other DBs
NCBI-GeneID:
124326091
NCBI-ProteinID:
XP_046640665
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All DBs
Position
2:11038707..11041847
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AA seq
680 aa
AA seq
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MDNSEAGGSFLLYEQDGVLLTTKGISGDNSNLHLGKLRIVKEKTGIYMLWLSEENSAGLP
YSGSTDTDWTVINPNQGSVGYHSNGTGRPIRFEVEDLKCICLSPISDSSGQPRRHTSGAK
ADPGRTCSVTFVQTDGTTYSNLIFPGGSTHGLLDALTQHLVLKRSCHDDSMILCEPKTPK
LRRDPYERSLAELRLFPDRNPAMHSAGYARLGQLGQIGVGAWRFVNDLKRDPYTATMTAF
SKISDYLLHEEVKANEDIAELLQKSLTLDEPTTTAQRVPIASSNDADESTMLVGSSDSSV
EGYEVIQPPVADLIPRPRVNRGQPLTEIEWQTYFDEEGRIEKSQEIRIKIFRGGIEPSIR
SEVWKFLLGYYPWHTSQVERKELRDKKVEEYFRMKLQWRSLSALQESRFASFKQRKDLIE
KDVNRTDRTISYYAGENNTNVSTLRDVLMTYCLYDFDLGYVQGMSDLLAPLLFVLDDEVD
AFWCFSAYMERVSLNFHLDQAGIKRQLSQLRMLVQAVDPHLASYLDTRDSGNLFFCFRWL
LVLFKREFNYPQILRLWEVFWTDGPFHGDEESLSATNFHLLVALSILDSQRNTILENRFG
FTEILKHVNDLALYIDLEEALAKAEGIFIQLKDSPSVGSEVRRILGLREMSESSEDSPSS
NSTDSLLEERYETALGLHYL
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
atggataactcagaagctggaggatcgttcctcctctacgaacaagacggagttttgttg
actaccaagggaatcagtggtgacaactctaatcttcatctgggaaaactgcgcattgtt
aaagagaaaacggggatatatatgttatggttaagtgaagaaaatagtgcaggtctacca
tactctggctctacagacactgattggacagtaattaatcctaatcaaggttcagttggt
tatcatagcaatggtactggaagacctattcgttttgaagttgaagatttgaaatgcatt
tgtttatctcctatttctgacagcagtggacaacctagaaggcacacaagtggggcaaag
gctgatcctggtcggacgtgcagtgtaacatttgtgcaaactgatggaactacatattct
aaccttatttttccgggtggatcaactcatggtcttcttgatgctcttactcaacattta
gtgttaaaacgatcttgccatgatgactcgatgattttgtgtgaacccaagacccctaaa
ttaagaagagatccatacgagcgatcgttagctgagctgcgccttttccctgaccgaaac
ccagctatgcattcagccggatatgctagattaggtcaattgggtcagatcggtgttgga
gcttggagattcgtcaatgacttaaagagagatccctacactgcaaccatgactgctttt
tcgaaaatatcagactacttactccacgaagaggtgaaggccaatgaagatattgcagag
ttacttcagaaaagtttaacactagacgagcccacgactacagcccaaagagttccaatt
gcgagtagtaatgatgctgacgaaagcacaatgctagtgggcagctcagattcgtcagtt
gaaggttacgaagtaattcaaccgccagtggcagaccttatcccgagaccaagagttaat
cgaggacaacccttaactgaaatcgaatggcaaacttatttcgatgaagaagggagaatc
gagaaatcccaagaaatccgcatcaaaatatttcggggggggatcgagccatctatccgt
agtgaagtgtggaagtttcttctaggctactatccctggcacacgagtcaggtcgaaaga
aaagagttacgcgacaagaaagtcgaggaatactttcgtatgaagcttcagtggcgttca
ctttctgctctccaagaatcccgtttcgcctccttcaagcaacgaaaagatttgatcgaa
aaagatgtcaaccgaacagaccggaccatttcttactatgccggcgaaaacaatacaaat
gtttctactcttcgtgatgtcctgatgacctattgtttgtatgatttcgacctcggatat
gtccagggtatgagtgatttgcttgctccacttctcttcgttttagacgacgaggtggat
gccttttggtgtttttcggcgtacatggagcgtgtaagtttaaactttcacctagaccag
gctggcattaaacggcaattgagccagctccgaatgcttgtacaagctgttgatccgcac
ttggcttcctatcttgacactcgcgattctggcaatttgtttttctgctttcgctggctt
ttggtcctgttcaagcgtgagtttaattacccccaaatcttgcgcttatgggaagtcttt
tggacggatggaccgttccacggcgacgaagagtcactttcagctaccaactttcacttg
ctggttgctctcagtattttggatagtcaaagaaacacaattttagaaaatcgcttcgga
tttactgaaattctcaagcatgtgaacgatctggcattgtacattgacctggaagaagct
ttagccaaggcggaaggaatattcatacaactcaaagattctccatcggtgggctcagag
gtccgtcgaattctcggactaagagaaatgagcgaatcatccgaagacagtccatcatct
aatagtacggattctctattagaggagcgctatgaaactgctctcggccttcattatctg
taa
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