Daphnia pulicaria: 124326102
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Entry
124326102 CDS
T08670
Name
(RefSeq) rab11 family-interacting protein 4-like isoform X1
KO
K12485
Rab11 family-interacting protein 3/4
Organism
dpz
Daphnia pulicaria
Pathway
dpz04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
dpz00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
124326102
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dpz04131
]
124326102
Membrane trafficking [BR:
dpz04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
124326102
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF-hand_7
RBD-FIP
EF-hand_9
EF-hand_6
EF-hand_1
Shugoshin_N
DivIC
EF-hand_8
Motif
Other DBs
NCBI-GeneID:
124326102
NCBI-ProteinID:
XP_046640685
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All DBs
Position
2:complement(10396286..10408050)
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AA seq
627 aa
AA seq
DB search
MEAPLCDRQQQVNLNNNINNSKDVDVHQQLLRRVFQMCDVQRRGHISIDDLLELGQSYLG
QDTKDLADALRSLDPLGDGTLTFDEFCRGVGSIIQQSPTEGPTSRDLTSSTSSSSPTKRS
RTLIDWSELTMPLVTGEGHSTSTQAAHLVVNDEDILLASSVDGSVVAGKRRNSLSDEVDS
GYSKSSSPTDSAPTTGSVSGCSSMSEREISFEGYGEADHSIENGTPSDADANPVPQMIGN
RANWMNGMLRNSLRRSDYNSHGDGAFHRRYGSLRLPGKRGIAAGSNALASQLYSKNVNNT
SSRSSNGGDNEDFCSDASLEDDVVDLGHKVQILQQQITALADTQFSSDDRYSRSKQENAA
LTARLQMLEESLRDVELRATQQLSEEQRRNKELIVRVEREKQLEIENCTIKLQAAEREVE
LTREECARLRGQTERLRGERSALQQRLYEAESSLLEGQEELRRMSDLVKREREQWAVENA
NGKQLAAELSREVDLLRATQHQSSNSSSHGEFGEELTPSAARVREMENEIKTLKQQNNSL
REANDELQAQLFSRGLEEGRTLLSEHVACNSLAAEFEVMSQDDVSEKIRTALKEQQDVNA
QLRSYIEGILLTIVENQPSLLERKPLP
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atggaggctccgctgtgcgaccgccagcagcaagtgaatctgaacaacaacattaacaac
agcaaagatgttgacgttcatcagcagttgctgaggcgggtctttcaaatgtgcgacgtc
caacggcgcggtcacatttccatcgacgatctactggaactcggacaatcttatctcgga
caagacaccaaggatttggcggatgcactgcgctcgctagatccgctcggagatggcacc
ctgacgtttgatgaattttgcagaggcgtcggatccatcatccagcaatcacccacagaa
gggccaacctcacgagacctgacatcatccacctcctcctcgtctccaacgaaacggagc
cggacgctgattgattggagcgaattgaccatgccattggtgacgggcgagggacattcg
acgtcgacacaagcggctcatctggtggtcaacgacgaagatatcctcctggcttcgtcg
gttgacggaagcgttgtggccggcaagcgccggaattccttgtcggacgaagtcgattcc
ggttacagcaagagcagcagcccaacagattcggcgcccaccaccggcagcgtcagtggg
tgttccagcatgtcggagagagaaatcagcttcgaaggatacggagaggcggatcattcc
atcgagaacgggacgcctagcgacgccgacgccaatccagtgcctcagatgattggcaac
cgagccaactggatgaacggaatgctgcgcaatagtctgcggcgatccgattacaacagt
catggcgatggcgcatttcatcgacgctacggatccctacgccttcccggcaagagagga
atagcggccggatcgaacgccttggccagtcagttgtacagcaagaacgtcaacaacacg
tccagtcgcagctccaacggtggcgacaacgaggatttctgttcggatgcttcactggaa
gacgacgtcgtcgatcttggccataaggttcaaatactccagcaacagattaccgccctg
gccgacacgcagttcagcagcgatgaccggtacagccgtagcaagcaggagaacgccgcc
cttaccgctaggttgcagatgctggaagagagtctccgcgacgtggaactacgagccacc
cagcagctgagcgaagagcagcgacgcaacaaggagctgattgtgagagtcgagcgtgag
aaacaactggaaattgagaattgcaccatcaaattgcaagcggccgaaagagaagtggag
ctgacgagggaagagtgcgcccggctgcgcggacagacggagcgactgcgcggcgagaga
tcggccctccagcagcggctctacgaggcggaatcgagtctgctggaagggcaagaggag
ctgaggcggatgagcgacctggtcaagcgtgagagggagcagtgggccgtcgagaacgcc
aacggcaagcaactggcggccgaactgtcgagagaagtcgacctgctccgggccactcag
catcagagtagtaatagcagcagtcacggcgaattcggcgaggagctgacgcccagcgcc
gcccgcgtccgcgagatggagaacgaaatcaaaaccctcaagcaacagaacaacagtcta
cgtgaagccaacgacgagctgcaggcccagctattctcacgcggcctggaggaaggccgg
actctgttgagcgaacatgtggcctgcaacagcttggccgccgaattcgaagtcatgagc
caagacgatgtaagtgaaaaaatccggacggctttaaaagaacagcaggatgtcaacgcc
caattgcgctcttacatcgaaggcatcctgttgacgatcgtcgagaaccagccgtctctt
ctcgagcggaaacctctgccgtga
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