Daphnia pulicaria: 124327476
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Entry
124327476 CDS
T08670
Name
(RefSeq) probable ubiquitin carboxyl-terminal hydrolase FAF-X
KO
K11840
ubiquitin carboxyl-terminal hydrolase 9/24 [EC:
3.4.19.12
]
Organism
dpz
Daphnia pulicaria
Brite
KEGG Orthology (KO) [BR:
dpz00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
dpz01002
]
124327476
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dpz04121
]
124327476
Enzymes [BR:
dpz01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
124327476
Peptidases and inhibitors [BR:
dpz01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
124327476
Ubiquitin system [BR:
dpz04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
124327476
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ARM_UBP24_USP9X-Y
DUF3517
UCH
UCH_UBL1
UCH_1
Motif
Other DBs
NCBI-GeneID:
124327476
NCBI-ProteinID:
XP_046642368
LinkDB
All DBs
Position
2:7574747..7585371
Genome browser
AA seq
2690 aa
AA seq
DB search
MTIAMKNSGEGGTPVGNESMQETTAIGNTTPNQNSPAAAVNIDGNTNGQNAKEKENDEEA
WLDPTTGEPYFPVSELARLEEMISRTRWVVPVLPKCELEILLDASINLCRRELDTRSEAC
QRFFQDGLTKSFTKILTDDAVSSWKFEIHRCILRNCEKLIELCVSKLSQDWFPLLELLAV
VLNPQCKFHTFNLTRPSELYPLNANGGDEEIFAKSPDIRAPRGWLVDLINRFGKLNGFQL
LLERFQSEQNLSLPVMFALIRPFGLCNEMLTIPTITKYFLPIVEVIPAFLDNLTDEELKK
ESKNEGKNDLISALVKFLKNLAQRVPGQEETLQNLEMFRLKMILRLLQISSFNGKMNALN
EINKVIASVASYPHRTTGNSVVTGANETDEEWLTAERMAGWLKEHRVLQIVLADSLHQPQ
YVEKLEKILRFVIKEKALTLEDLDRVWASQAGKHEAIVKNVHDLLAKLAWDFSPEQLDHL
FECFQASWTTAGKKQREKLLELIRRLAEDDKDGVMAHKVLTLFWNLAHSPDVPNEIIDQA
MNAHVKILDYSCSQDRDTQKTVWLDRCVEEIRHNVWVLQALKQIRDICCLYAETPANYNH
AANAHASRAQHVLYRQEVVNRLQQQHALVILITDNLCSYMERVRSTVKDSPANYDPLTHL
PDGRYSHVLQVQERLSFLRFLLKDGQLWLCAPQARQIWHCLVERAIFVADREACFKWFSK
LMGEEPDLDPEVNREFFEAQILQLDPSLMTESGMKCFDRFFKAVNAKEGKLVARRKMNDV
GLIGLDYLWRVILFGSDPVAEKAIHLLKETYTSLGPRLVNNQVEIHEDLIGSCSDRLRAS
HDTLRAYMIQQQQQQPHEALVTEKDFANRSRQETTRMCRLLKLLQEYVSDYDCEFQMREE
RTLLPLGRAHRGKCFTLVVRFPNQGRQPEDIEIWTHSNETLATVRRRIMARVKSTNQTAA
LSATAGVNSSLIQPQVVGHQQPPVQQQQSGVKLDLYLNNELIEPSEGYRLVADLPLRDKT
MLTAKLSQSNTAVAGSPDSSSDSSTGGSPQHAPSSYQGSLGGQQHHPISAASAEIMLPGV
LMSRDKRINPFLCQLADLGSQLQHAQLRDAARNLLRQLPADPQAIERLVAASQIPPVVSS
SPSVTSSEKTGPTQSPSELESIFVAASPSTILYHLEVAYSLLMPANMSASERTSEFQLGF
ILRGGIPLLLNMLSAKSFLATADIPTKRSAYLSILRLSKVVLAVMSHICLRNLVESPIHT
VLLQNSSSCIATDNVVRAIAVRLTQHMQGDSDASLLLCGVKPDEEVVRSLVRLAWASSSG
DYQLLDSPWDELGSVKINSFLTPIQENEYSEDTLLCKEALEVLTVVNSISPRALYQVSQA
PTFYRFSLEMILLCPVKPLRLSAAEQFLLISSQPVLLQATLTPESPSMLTFFLELLFSVM
GSTVPEHAKNSQEFFQLLCRLLNLAATSGTPLPTAEPLLLNEISWLQSVRESFLKTGSTQ
TEDDLLEGHLCLTRELVSYLGLAKKFEVGSDPSKGVNLIKELLEDFLYPASRIMAKYNST
GELMSAVADPICSSSASVVAALDLLVALSSGCVANMKLLTSMLTEMFFSDQQAEPLSEWE
YLPPVGPRASWSFVGLKNAGATCYMNSVLQQLFMIERLRRGVLLAHGAALDPDEDFNGDE
KMENETETNEDQQLQLQQHQRSRDESTREYNINILKQLQAIFGHLAASKLQYYVPRGLWR
HFKLQGEPVNLREQQDAVEFYMSLTDSVDEALKALGHEQIMHRTLVGIYSDQKICKGCPH
RYCKEQPFNVISIDIRNHSNLHDSLEQYVKGELLEGGDAYHCEKCNKKVNTVKRLCVKKL
PPILAIQLKRFEYDYERLCPIKFNDYFEFPRVLDMEPYTVWGLAKAEGEIIDYDMEEEAN
RDICTRYQLTGIVVHSGQASGGHYYSYILHRPPANANGGTSGAKWYKFDDGDVSECKMDD
DEEMKNQCFGGEYMGEVFDHVVKRMSYRRQKRWWNAYILFYTKEDIDISNRMSELTVNES
VSSTSSASPTPSLSMPLAIERSVRKQNIKFQHTYNQFSTEYFHFMRKLISCQTPYLVVDP
KALSAKLPSLPSSIHLDPAVMEELALLSVEIGAHFLFTTCLHTKKSLRGVASDWYEALLG
PMRVSKTARLWIGQRVLLDHPQRFCEYLLQCPSAEVRSAFVKILVFLAHLSLSDGPCEIT
SPSTTIPGALSIPSSCGAPILGEVTLADHIFQAVLNLLSKEVADYGRHLSQYFNLFLVYA
SLGPPEKAHLLRLNVLATFMTVALDEGPGPPIKYQYAELGKLYQVVCMLIRCCDISSKTS
SSVPGQPPLPNSFGEPPLMPIQPQVAEILYTRNNFVKKLLEDASGIEETSRLLRYCCWEN
NHFSFAVLSEILWQVAFAYTYELRPHLDLLLCILSLEDSWQKYRITAALKGIPDDRDGLF
DIIQRSKNHYHKRAYQCIKCLVALFSSCPTAHQILLTNVEFKRKWSAAVDWLHEELDRPY
PTGNNQYNQWSPPAQSNETSNGYFLERSHSARLTLDKSIELCPEEEVESEDAVGGNPSGV
GNSVVGSGGDDSDNIAPPPALVADSSLDNPTAALVKSQTMTRAAFGVSQPRPGHAQAASP
RATAPPTNPNLSIPRSSSSQFPPLHPNRPQQPPVKNEGNGSSQSGPSPTH
NT seq
8073 nt
NT seq
+upstream
nt +downstream
nt
atgacaatagccatgaaaaacagtggagaaggagggactccagtgggaaatgagtccatg
caagaaactactgctattggaaatactactccaaatcaaaacagtcctgctgctgctgta
aatatagatggaaacacaaatggtcaaaatgcaaaagagaaagaaaatgacgaggaagcc
tggttggatccaactacaggtgaaccttatttcccagttagtgaactggccaggctagaa
gaaatgattagtaggacacgttgggtagtccctgtcctaccaaagtgtgagcttgaaatc
cttctggatgcatccatcaacttatgtaggagagaactggatacaagaagtgaagcttgc
cagagattcttccaggatggcctgacaaagtctttcactaagattttgactgatgatgct
gtcagcagttggaagtttgagattcatcgttgcatcttgaggaattgtgaaaaactaata
gaactatgtgtctcaaagctgagtcaagactggtttcccttgctggagctgctagctgta
gttttgaatcctcaatgcaaatttcacaccttcaacttaacccggccctccgagctctac
ccgttgaatgcaaatggaggtgatgaagaaatttttgcaaagtcccccgacattcgagct
ccaaggggctggttagtggaccttattaatcgctttgggaaattgaatggatttcaactg
ttgttggaacggtttcaaagcgagcaaaacttgagcctgcctgtgatgtttgctcttatt
cggccatttggactctgcaatgaaatgttgaccatccccaccattactaaatatttcctg
cctattgttgaggtgatccctgcattcttggataatttaaccgacgaagaacttaagaaa
gaatcgaagaacgaaggcaaaaatgatttaatatcagcacttgtcaaatttctcaagaat
cttgcgcaacgtgtccccggtcaggaagaaacgctccagaatttggaaatgtttcgactt
aaaatgatccttcggctattgcaaatttcatcttttaatggcaaaatgaacgccctcaac
gagatcaataaggttattgcgagtgtagcttcgtatccccaccgaacaacgggcaacagc
gtcgttacgggtgccaacgaaactgacgaagagtggcttacagctgaaaggatggctgga
tggctgaaagagcatagggtattacagatcgtcctagccgattcgttgcatcagcctcaa
tatgttgagaaacttgagaaaatcctccgctttgttattaaggagaaagcactgacactg
gaagatttggaccgtgtttgggcttctcaagccggcaagcacgaagccatagtcaagaat
gttcatgatttgcttgccaaactagcatgggatttttctcccgaacaattggaccattta
tttgaatgttttcaggcaagttggacaactgcagggaagaaacaacgagaaaagctgtta
gagctgattcgccgcttagctgaggacgataaagacggtgtaatggctcacaaggtgttg
acgttattctggaaccttgcgcactcacccgacgtgccgaatgaaatcatcgaccaggcc
atgaatgctcatgtgaagatccttgactattcttgctctcaagatcgtgacactcaaaaa
acagtttggctcgatcgttgcgtcgaagagattcgtcacaacgtgtgggtactccaggcg
ctcaaacaaattcgagatatatgctgcctgtatgccgagactccggccaattacaaccat
gccgccaacgcccacgcatctcgtgctcagcacgtcctctaccgacaagaagtggtcaat
cgtctccagcagcagcacgcactagtcattcttataactgacaatctctgttcttacatg
gagcgtgtgcgaagcaccgtaaaagacagtccagccaactacgatccgctcacgcatttg
ccagacggtcgttacagccacgttcttcaggttcaagaacgcttgagttttttgagattt
ttgctgaaagacgggcagttgtggctttgtgcgcctcaggcacgtcagatctggcattgc
ctggttgaacgggctatatttgttgctgatcgagaggcctgcttcaaatggttctcgaaa
ttgatgggcgaggagcctgatcttgatcccgaagtaaatcgcgagttcttcgaggcacag
attcttcaactggatcctagtctcatgactgagagtgggatgaagtgcttcgatcgtttc
tttaaggctgtcaacgctaaagaaggaaaattagtagcccgacgcaagatgaacgacgtg
gggctcatcggacttgattatttgtggcgtgtcattctgtttggaagtgatccagttgct
gaaaaagctattcatctgctgaaggagacctacaccagtttaggtccccgattggtcaac
aaccaagttgagattcacgaagatctcataggcagttgtagtgacagacttcgagcttca
cacgatactctgcgtgcgtacatgatacaacagcagcagcagcagccacatgaagcctta
gtgaccgagaaggatttcgccaatcgaagcagacaggagacaacacgcatgtgcagactg
ttgaaactattacaggagtatgttagcgactacgattgcgagtttcagatgagggaggag
cgtactctgctccctctgggaagagcacacagggggaaatgctttacactggttgtccgg
tttcctaaccaaggacgccaaccggaggatatcgaaatatggacccatagtaacgagacc
ctcgccaccgttcggcgacgcatcatggctcgagtgaaatctaccaaccagacagctgcc
ctgtctgcaactgctggagtaaattcgtctttaattcagcctcaagtagtgggccaccag
cagccgccagtacagcagcaacagagtggagtcaagctggatctctacttgaataatgaa
ctcatagaaccttccgaaggatatcgtttagtggcagacttaccactcagggataaaacg
atgttgacagctaaactgtcgcaatcgaatactgctgtggcgggatcaccagacagtagc
agtgatagtagcacgggtggttcacctcagcatgcgccaagcagttatcaaggtagcttg
ggaggtcagcagcatcatccgatttcagccgcttccgccgaaattatgctaccgggagtg
ttaatgtcgagagacaagcgcatcaatccgtttttgtgtcaattggcggatctgggctca
cagttacagcatgctcagttgcgtgacgcagcacgcaatcttctacggcagttgccggct
gatccgcaggctatcgagcgccttgtagccgctagccaaattcctcccgtcgtttcgtct
tcgccttcagtgacgagtagcgagaaaactgggcctacccaatctccttcggaattggaa
tctatcttcgtagcggcatcaccctcgaccattttgtatcatctggaggttgcctacagt
ttgctgatgccggccaatatgtcagcttcggagagaacttctgagtttcaactaggattc
attctcagaggtggaattcctctattattaaatatgcttagtgccaagagtttcctcgcc
accgctgatattccaactaaaaggtcggcgtatttaagcatacttcgactgtcaaaggtt
gtgctggctgtaatgtcccatatttgcttgcgcaaccttgtcgaatcgcccatccacacc
gttctgcttcaaaatagcagttcttgtatagcaactgacaatgttgtaagggctattgct
gttcggcttactcagcacatgcagggtgactcggatgccagccttctcctgtgtggcgtc
aagccggatgaagaggttgtccgctctctggtccgtcttgcctgggcaagtagtagcggg
gattatcagctgctcgattctccttgggacgagcttggctctgtcaaaataaacagcttt
ttgacgcccatccaagaaaatgaatattcagaggatacgctgctctgcaaggaggccttg
gaagtcttgactgtggtgaacagtatatcaccacgggccctttatcaggtgtcgcaggcc
cctacgttttatcgattttcacttgagatgatactgctctgcccggtgaagccactccgt
ttatccgcagcggagcaatttcttttgatatcgagtcagcctgtgttacttcaagctact
cttacgcccgagtctccttcgatgttgacgttctttctcgaactactattttcggttatg
ggcagcacggttccagaacacgccaaaaattcacaagagttttttcagctcttgtgtcgg
cttttgaacttagctgccacttccggcacccctctacctacagccgaacccctactactc
aacgaaatcagttggctgcaaagtgttagagaatcttttttgaagacgggatcaacgcag
actgaagatgatttactggaaggtcatctttgtctcactagggagctggtgtcttacctc
ggcttagctaagaagtttgaagtggggtctgatccttcgaagggtgtcaacttaattaaa
gaactcctggaagactttctttatccagcatctcgtatcatggctaagtataacagcact
ggcgaattaatgtctgctgtggccgatcccatttgctcttcatcggcttcggtggtggcc
gcactggatcttctagtggcccttagttctggatgtgtggccaatatgaaattattaacg
tccatgttaaccgaaatgtttttctctgatcaacaagccgaaccgcttagtgaatgggaa
tatttgcctccagttggaccaagagcttcctggagttttgtgggtctgaaaaatgccgga
gctacttgctacatgaactctgtattgcagcaactttttatgatcgaacgtttgcggcgc
ggtgtgttacttgctcacggcgcagcgctcgatcccgatgaagattttaacggcgacgaa
aagatggagaatgaaacggagaccaacgaagaccagcagctgcaattgcagcaacaccag
agaagccgagacgaatcgactcgcgaatacaacataaatattctgaagcaactgcaagcc
atctttgggcatttggcagctagcaagttgcaatattacgtccctcgtggcctctggcgc
catttcaagcttcaaggcgagccggtcaatcttcgtgagcagcaagatgctgttgagttc
tacatgagtcttacggacagcgtcgacgaggctctgaaagcactgggtcatgagcaaatt
atgcatcgaaccctagttggcatctattctgatcaaaaaatttgcaagggttgtccgcat
cgttactgtaaggagcaacccttcaatgttatcagtattgacattcgcaatcacagtaat
ctgcacgattccttagaacaatacgttaagggagaattactcgaaggtggtgatgcgtac
cattgcgaaaaatgtaacaaaaaagtcaatactgtgaagcgactatgtgtgaaaaagtta
ccgcctatcttggctattcaactgaagcgattcgaatacgactacgaacggctttgtccc
attaaatttaacgactatttcgagttccctcgcgtcctggacatggagccgtacacggtg
tggggtttggctaaagccgaaggcgaaattattgactacgacatggaggaagaggctaat
cgcgatatttgcactcgctatcagttgactggaatcgtcgttcatagtggccaggcaagt
ggcggtcattactattcttacatcctccatcgacctcccgcgaatgctaacggtggtacg
agtggagcaaagtggtacaaattcgatgacggagatgtgagcgaatgcaaaatggacgac
gacgaggaaatgaagaaccaatgtttcggcggcgagtatatgggcgaggttttcgaccac
gtcgttaaaagaatgagttaccgacgtcagaagcgttggtggaatgcgtacattctcttc
tacaccaaggaggacatcgacatcagcaatcggatgagtgaattaacagtcaacgagtcg
gtatcttcgacgtcctctgcctcgccaactccctcactctctatgcctctggccatcgaa
cgaagcgtccggaaacagaacatcaagtttcaacacacgtacaaccagttttcaaccgaa
tattttcatttcatgaggaaactgatcagctgccagacgccgtacctagttgtggatccg
aaagcattgtcggccaagttaccaagtttgccgtcatccatccacctggatcctgctgta
atggaggagctcgctcttttatctgtcgagattggcgcacatttcctcttcaccacttgt
cttcacactaagaaatcgttgagaggggtggccagtgactggtatgaagcgctccttggc
ccgatgcgcgtttcgaagacagctcgtctctggatcggccaacgcgtcctcttggatcat
cctcagcgtttttgcgagtatctcctgcagtgtcccagtgcggaagtccgttcagcgttc
gtcaaaatcctagtctttctggctcatctatcgttgagtgacggtccctgtgaaatcact
tcaccgtccactaccatacccggcgctctatcgattccaagtagctgcggagcaccgatt
ctcggtgaagtcacactggctgatcacatattccaagcagtgttgaacctactcagtaag
gaggtggccgactatggaagacacctctcacagtatttcaacttgtttctggtctacgct
tcacttggcccgcctgaaaaagctcacttactccgactcaatgtcttggctactttcatg
acggtggctctggatgaaggccctggcccaccgatcaagtatcagtatgctgaactcgga
aagctctatcaggttgtatgtatgttgattcgttgctgcgacatcagctccaagacgagc
tcgtcggttcctggccagccgcctttgcccaattcgtttggtgaaccaccgctgatgcct
atccagccccaggtggcggagattctctacacccgcaacaactttgttaagaaacttctg
gaagatgcgagtggcattgaagaaacgtcccgtctattacgatactgttgctgggaaaac
aaccacttttcttttgccgttctctctgaaatcttgtggcaggttgcctttgcctacacc
tacgaattgcggccacatctcgacctgcttctctgtattttgtcgttggaagactcatgg
cagaaatatcgcatcacagctgctctaaagggtatccctgacgaccgggatggattattt
gatatcatacaaaggtccaagaatcactatcacaagagagcctatcagtgtatcaagtgc
ctcgtggcgctcttctcttcgtgccctacggcccaccaaattttgttgaccaatgtcgaa
ttcaaacgcaaatggtctgcagctgtagattggcttcacgaagagcttgacaggccatat
ccgacaggcaacaatcaatataatcaatggtcaccacctgcgcagtcaaacgagacctct
aatggctactttctcgagcgctcacacagcgccagattgacgttggacaagtccatcgaa
ctatgtcctgaagaagaagtggaaagtgaagatgcagttggcggaaatccaagtggagtt
ggcaatagcgttgttggcagtggaggagatgacagcgataatattgcacctccaccagca
ttggttgctgatagcagcttagataaccctacagcagctcttgtaaaatcacaaacgatg
acaagggcagcatttggtgtatcccagccccgaccgggccacgctcaagcagcatcgcca
cgagccactgcaccgccaacgaatcccaatctgtcgattcctcgctcttcttcctcacaa
ttccctcctctgcatccgaatcggccccaacagccacctgtcaagaacgaaggtaacggt
agcagtcaatccggcccgtcacccacccattag
DBGET
integrated database retrieval system
