Daphnia pulicaria: 124327819
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Entry
124327819 CDS
T08670
Name
(RefSeq) host cell factor 2-like isoform X1
KO
K14966
host cell factor 1
Organism
dpz
Daphnia pulicaria
Pathway
dpz03083
Polycomb repressive complex
dpz04980
Cobalamin transport and metabolism
Brite
KEGG Orthology (KO) [BR:
dpz00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
124327819
09150 Organismal Systems
09154 Digestive system
04980 Cobalamin transport and metabolism
124327819
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
dpz01009
]
124327819
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
dpz03036
]
124327819
03029 Mitochondrial biogenesis [BR:
dpz03029
]
124327819
Protein phosphatases and associated proteins [BR:
dpz01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
124327819
Chromosome and associated proteins [BR:
dpz03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
NSL complex
124327819
HMT complexes
COMPASS/SET1 complex
124327819
MLL-HCF complex
124327819
Polycomb repressive complex (PRC) and associated proteins
PR-DUB complex
124327819
Mitochondrial biogenesis [BR:
dpz03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
124327819
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Kelch_HCF
Kelch_KLHDC2_KLHL20_DRC7
Beta-prop_FBX42
Beta-prop_ATRN-LZTR1
Kelch_1
Kelch_2
fn3
Pur_ac_phosph_N
Motif
Other DBs
NCBI-GeneID:
124327819
NCBI-ProteinID:
XP_046642788
LinkDB
All DBs
Position
1:complement(961479..967555)
Genome browser
AA seq
1418 aa
AA seq
DB search
MAAPISPMLKWKKIANPAGPNPRPRHGHRAISIKDLMIVFGGGNEGIVDELHVYNTTTNQ
WFVPPVKGDIPPGCAAYGFVVDGTRILVFGGMVEYGKYSNELYELQASRWEWRRLKAKAP
DNSSAPCPRLGHSFTIHGNRVFLFGGLANDSEDPKNNIPRYLNDLYILHITPTGQKEFWE
LPVTFGEPPSPRESHTAVTFNRDGTSPKLIIYGGMSGCRLGDLHILDVNTMSWTKPIVNG
APPLPRSLHSATLIGHQMYIFGGWVPLVMDDMKMPTHEKEWKCTNTLACLDLNSMTWEPL
TMEVYDESVPRARAGHCAVGIHTRLYVWSGRDGYRKAWNNQVCCKDLWFLETEKPPAPGR
VQLVRASTNSLEVCWGVVPTAEAYLLQIQKYEVPPAGATPTPGADAASPAPTPGTPSTPN
TPSTPVRAPGSIQGSVRQVTPQGTPVGVGRGANIVRVRAPVGGQTIRVLGPTGQTQIIRA
GASPNQPGMSGIQALAAAAAQTQRLPTPTSSATGVRMVQPTLLTSQGVRVTPVPGSVSGA
QTVRLSSGATILKAGTSLQGLQTIQTAGGKQIILQKSGTAGVGGQPQIVTLVKTSQGMTV
ATVPKGMSLVQAKPGTTGAVTTVQGSPKGIPQGATIVKLVGQGQGGTKGTLLQAGQQVTA
GQLMTVGGKQQMVTTQNVGGKQTIVITRPGGPGNLKQGGQQVIVVSTAGGMRTVQGTATV
QAGGQSGTQTVNVLPTTGQVTTGPGGVKMIVVSQGVVSSSTSSSSTSTAIAGGTKTISIP
AGALQKTMTLARAGGPQGQIITLPGGQTLVGSGQQTITLGGKPVTVQVSTAGGQKTVTLV
TSQGAGAIPANVAKLLSAGGGQSKVVLVPQSSVTTTAAASAQPETVSSTQSTPSATLSIS
DGPATTDAALAALAAEAGLIDPPEEAEASSAVPASDSTSIPVSIENEDALQLLAGMSAEM
VDASSTLDAASSTAATASETSLVNASGLENPDVTSASTDVTPAPPTVPIVEGVPGEKKST
EGDKDESSTTSVALATETEPITASDLVEPEPIAKTDVPNESVNGTAVSTDAEPVLAEEEK
SEKPIAAEETKEESKEEPLVSDQPEAVDTESQKPIAADSPVKDVKLVPEATSPKKIGTDQ
LPMDVEPSDPLSTLASAAVIKAEAIVVKSETPSNGIKQEETKIDLKKIDGIWFDVGLVKG
TTSTVQNFLLPSNGGGIEERIDHETVTLPPDAELGMKKLELQPGTAYKFRVAGVNSCGRG
LWSEVSAFKTCLPGFPGAPSAIKISKSPEGAHLSWEPPQSTAGEITEYSVYLAVKGTSAQ
SVSGPSQLAFVRVYCGPSSQCTVPNASLSSAHIDTTTKPAIIFRIAARNEKGYGPATQVR
WLQDSSTAPTPAKGAVKRGSETSKSATAAAAKRSRTDD
NT seq
4257 nt
NT seq
+upstream
nt +downstream
nt
atggcggctcccataagtcccatgttaaagtggaaaaaaattgcgaatccggctggtccg
aaccctcggccacgccatggacaccgtgcgatttctataaaagatttgatgattgttttt
ggtggtggcaacgaaggaattgtggatgaattacatgtctacaacaccacaaccaaccag
tggttcgtcccaccagtgaaaggtgacataccaccaggatgtgcagcttacggctttgta
gtggatggtaccagaattctcgtgtttggtggcatggttgagtatggaaagtactcgaat
gagttgtatgagcttcaggcaagtcgatgggagtggcgacgccttaaagccaaagctcct
gataattcttcagctccttgtccacgacttggtcacagttttactatccatggaaacaga
gtcttcctgtttggtgggcttgcaaatgatagcgaagatcctaaaaataacatccccagg
tatcttaatgacctttacatactccacatcactcctactggacaaaaagaattttgggag
ctgcctgtcacttttggtgagcccccttccccacgggaatctcacactgctgtcacgttt
aatcgcgatgggacaagtcctaagttgattatctatggaggaatgagtgggtgccgactg
ggagatttacacattttagatgtcaataccatgtcttggactaagccgattgtaaacggc
gcccctcccctaccaagatctttacacagtgccacattgataggccatcaaatgtacata
tttggtggatgggttccattggtgatggatgatatgaaaatgccaactcacgagaaggaa
tggaaatgcaccaacacacttgcttgtctcgacctgaattcgatgacttgggaaccctta
actatggaagtttatgacgaatcggttccacgcgctcgagccgggcattgtgctgttggc
attcacacccgtctttatgtatggtcaggacgtgatggctacaggaaagcatggaataat
caggtgtgctgtaaagacctttggttcctggagacggagaaaccaccagcgccggggcgc
gtccagcttgtccgtgcttctactaatagtctggaagtctgctggggtgtggttcctact
gcagaagcctaccttctccagatccaaaaatacgaagtcccacctgcaggagctacccct
actcctggagctgatgcggcctctccagctcccaccccgggaacaccgtctactcctaat
actccttctacgccagttcgcgcccctggatctattcaaggatcagtcaggcaagtcact
cctcaaggaacgccggttggtgttggcagaggagccaatatcgttagggttcgagctccc
gtaggcggccagacaattcgtgttcttggacccaccggacaaacacagatcatccgcgct
ggagcaagtcccaaccagccaggaatgtctggaattcaagccttagcagctgctgccgcc
caaacccaacgactacccactcctacaagctcagcaacaggcgttcgaatggtccagcca
acgcttttgacatctcagggagtgcgtgtaactcctgttccgggaagtgtgagtggcgca
caaacggtacgactgagtagtggtgctactattctcaaagctggtacttctctccaaggt
ttacagacgattcagacagcgggtggcaagcaaattattttacaaaaatcgggcaccgct
ggtgtcgggggtcagcctcaaattgttaccctagtgaaaactagccaggggatgactgtt
gcaactgtcccgaaaggtatgagccttgtccaagcaaagcctggtacaacgggtgccgta
acgacggtacaaggttcgcctaaaggaataccgcagggtgctaccatcgtaaaattggtg
ggccaagggcaaggaggcaccaaggggactctgctccaagctggacaacaagtaactgca
ggacagctgatgacagttggcgggaagcagcaaatggtcacaacgcaaaatgttggtggt
aagcaaaccattgtcatcactcgaccaggaggaccaggaaatctgaagcaaggagggcaa
caggtcattgttgttagcaccgctggtggaatgcgaacagttcaaggcaccgctaccgta
caagctggcggccagtctggaacacaaacggtgaatgtcttacctactactggacaagtc
accactggacctggcggtgtcaaaatgatagtagtttctcagggcgttgtcagttcatcg
acttcatcttctagtaccagtaccgctattgcgggtggaaccaaaactatttccatacct
gctggcgccctgcagaaaacgatgacacttgcaagagcaggaggacctcaaggacaaata
attactttgcctggtggtcagactttggtaggatctgggcagcagactattactttaggt
ggcaaacctgttacggttcaagtatccactgccggtggacaaaaaacagtcactttagtc
accagccaaggagcaggtgctattcctgcaaacgttgccaaacttctttctgctggtgga
ggtcaatcaaaagtggtacttgtgccacagagttcggtgactactactgctgctgcaagt
gctcaaccggaaactgtttctagcactcagtcgactccttctgccacattgagtatatca
gatggaccagccacaactgatgcggctctagctgctctagctgcagaagcaggattaatt
gatccgcctgaagaagccgaagcttcatcagccgttcctgccagtgactctacgtcgata
cctgttagcatcgaaaatgaagacgccttacaacttcttgccggaatgagtgccgaaatg
gttgatgctagttcaacccttgacgcggcttcgagtactgcggctactgcttcagagacg
tcgttagttaacgcgagcggtttagaaaatcccgatgtcacttccgcttctacggacgtg
actcccgcaccacccactgttcctattgtggaaggtgttcccggagaaaaaaaatctacg
gaaggggataaggacgaaagttcaactacatctgttgctttggctacagagacagaacct
attacagcttctgaccttgtggaacctgagccaattgctaaaactgatgttccgaatgaa
tctgtgaatggaacagccgtttcgacagatgccgagccagttttagccgaggaagaaaaa
agtgagaaacccattgccgctgaagagactaaagaagaaagtaaagaagaacccttagtc
tcagaccagccagaggcggttgatactgagtctcagaaacctattgcagcagattcgcca
gtgaaagacgtgaagctagttccagaagcaacttcacctaaaaaaattggcactgaccaa
ctgcccatggacgtagagcccagcgacccactctctactttggcttcagctgcggtcatc
aaagcggaagcaattgttgttaaatcagaaaccccttccaacggaatcaagcaagaagaa
accaagattgacttgaaaaaaatcgatggcatttggtttgatgtcggtctggtcaagggc
acgacgtcgaccgtgcaaaattttctgttaccgtcaaatggtggaggtattgaggaaagg
atagatcacgaaacggtgactctcccacctgatgcagaactggggatgaaaaagctagaa
cttcaacctggaacagcgtacaagttccgagtagctggtgtcaactcgtgtggacgaggc
ttgtggagtgaagtttctgctttcaaaacatgtctccctggattccctggtgctccgtca
gcaataaagatttccaaatcacccgaaggtgcacacctgtcttgggagccacctcagagt
accgctggagagataacagaatattcagtctatttggctgtcaaaggaacttcagctcag
tctgtgagcgggccttctcagttggcatttgttcgcgtctattgcggcccttcctcgcag
tgtaccgtaccgaatgcgtcgttgtcgtctgcccacattgacacgacgactaaaccagcc
attatcttccgcattgcagcccggaatgaaaagggttacggaccggccacacaagtcagg
tggttgcaagattcgagcactgccccgactccagcaaaaggagcagtaaaacggggatcg
gagacttccaaatcagctacggcagctgctgccaagcgatcacgaactgacgattaa
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integrated database retrieval system
