Daphnia pulicaria: 124328478
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Entry
124328478 CDS
T08670
Name
(RefSeq) transcription factor HIVEP3-like isoform X1
KO
K09239
human immunodeficiency virus type I enhancer-binding protein
Organism
dpz
Daphnia pulicaria
Brite
KEGG Orthology (KO) [BR:
dpz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dpz03000
]
124328478
Transcription factors [BR:
dpz03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
124328478
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-C2H2_4
zf-H2C2_2
zf-C2H2_jaz
zf-met
zf-C2H2_8
zf-C2H2_16
NOA36
SF3a60_Prp9_C
Motif
Other DBs
NCBI-GeneID:
124328478
NCBI-ProteinID:
XP_046643207
LinkDB
All DBs
Position
3:13160779..13169072
Genome browser
AA seq
1811 aa
AA seq
DB search
MEEWNVTLPNRSSGKSPRCQVDDGRCNGNNKKPMAPIRAAKVTAPAVSPSQSVNEATPEA
TQSSDLGYLHKKFKKVAATFSTTPEPALPAVAADPPTDESCAVVVVDPAKKEDQQPDSNG
SSKSSSKGGRYVCHYCQHACAKPSVLEKHIRAHTNERPYPCVPCGFAFKTKSNLYKHCKS
RTHVLKLEENGTAHPQLTGSAGIIIDPVEGGSDDTSDDNVMLDDSDEGEPLVVAVPPQPA
EIIVSVSSAPSTPEKFKTPYKPKFHNLKSSDDILETPPTTDEGRPSPGFLHERISQIISK
NQAIVETLDPIWPRRYVRQSSRDNKETAKSPRPDIVISSPSIKKSGLAGRERSCSLSLVP
HADQTTDSMVLAVPSSVAPSSTHRLLQEDENQRKRCYSEGPAVTEIRHSVRNLLQQSPKP
PRTDVFNPQNPEGSIIKDILLKSRGLLPANCEAKESAVAVVDPPTKMSSSFTVSALLNPS
TTRAKPTVEFPHPHISLDPADDPAERPPSKRSKISDVTQSAPFPRPPVDPEMIRSTSSSS
FVADRIRTSLPLFGGEVEIHDGPQRTVLRIDPAGYVESNRSNGQSTATAESPSSVVVTKV
SNLNNSGGLFRLQPQESRISVFPVMKTAETKSGGDPARGVIIHQPSVPYIPGIPGPYSSS
GWLPASTMTSVTVSYTTTTTVCTSQSTTTSQRPVPSITVHPPAASLLQPPHPEERTDSGF
DDEDPSTQASPKFLRPNSLSLQPGTFNLKKNNMAGLDPQSGQPNMLCVSGAGMTLISPET
PRPRKLFRQLYLNGHAYTYLGLKCSTRVYFCCLSRAQPMYVPHHPKLSMYSQWKTRAPAS
AGPPGLEASSPTQTMSLYDSRQRPTTCTTAQSTDHGRMILTHSSYWTNRDRPTTTHFKLQ
VTAAQDVVHIEIPPPPPAQSTPEESRPPDQVISPTAQAQTKPVQPKRVRIFAGGYKSTED
YTYVRGRGRGRYVCEECGIRCKKPSMLKKHIRTHTDLRPYTCRQCNFSFKTKGNLTKHMK
SKAHHKKCTELGIVPVPTTVDEANIDEDSLARQETLKKMKLAGGSGNEGDSDLDDDEDED
EDDEEDEEIEGEEEEDETEDDPPVTTKLLPTGQFEDATAAEPVREEREQEVARSLLDLGV
IAPAGCKPTTYPYASHFHPPEEEQHPSVEMKEEPPAPVCKQQPMDLSTSTAASSALLASI
YSPIVSETAARRLSPENSVQPATSGMLQAYLTEKALKEGLMKRHQVKLMTPPSVVVENPV
VTLFPTQSKSSRSEFVVPLSSTCPAAIPTSVTAYKLTDDGKTACSICNKVFTKPSQLRLH
INIHYFERPFRCEACAVSFRTKGHLQKHKRSVTHFNKVNMNLTFGTPSTENPRPFKCSDC
MIAFRIHGHLAKHLRSKMHIMKLECLGKLPFGTYAEMERSGINLNEIDTTDCHNSLESLQ
SLAHRLYKQDPSKIQQWQQEAQVVAEANLRERTISESSEEFSDVADDELDEDGEDSDGLP
DGAGVEEAPPPRKLTPVETLPAQPEMSHPPRAAAMSPDARKAPPPPPVMYCSACGDSCVS
MEAFQSHVMEKHRPLSPPTTRTPFKASPPATAPESPAKLAPPSNIQPDIGRVVNLAVESR
RSPSRVMETGPKPGPPWNRGPGDLQYAQPRGGFYGGPPHSSSTMWPPPQPRQPTIGDLMS
LGNPLSAIPPQWHQDPAAMAWIASRHMMLPGHPPTYTTPHHSGGHHTTNGVAMQPRLYSP
TSSSSSIAANDVDVVFPCELCGKSFNAKETLRQHMLAHAQPRPFVCEFCDAGFTTQKHLE
SHLVLHRPRTS
NT seq
5436 nt
NT seq
+upstream
nt +downstream
nt
atggaggaatggaatgtgaccttgccaaacaggtcatccggcaagagcccccgttgtcaa
gttgacgatggacgttgcaacggcaataataagaaacccatggcgcctatccgagctgcc
aaagtcacggcacccgccgtctcaccgtcacaatcagtcaacgaagctactccggaagcc
actcaatccagcgatcttggctatttgcacaagaaattcaaaaaagtagccgccactttt
tcaactactccggaaccggctcttccagcggtggcggctgatccgccgacggatgaatca
tgtgctgttgttgttgttgatccagccaaaaaggaggatcaacaacccgatagcaatggc
tcgtcaaaatcttccagtaaaggtggccggtatgtttgtcactactgccaacacgcctgc
gcaaagcccagcgtcctggagaaacacatccgggcgcatacaaacgaacggccctacccg
tgcgttccgtgcggatttgctttcaaaaccaaaagtaacctctacaaacactgcaagtca
cgcacacacgttctcaaattggaagaaaacggaacggcccatccgcagttaactggatca
gccggaatcatcatcgatccagtcgaaggcggaagtgatgatacttcagacgacaatgtt
atgctcgacgatagcgacgagggagagccactggttgttgctgttccgccacagccggcc
gaaatcatcgtgtccgtttcatccgcaccatccactccggagaaattcaaaacgccgtac
aaacccaaatttcataatttaaaaagttcagacgacattttagaaactccaccgaccacc
gacgaaggacgacccagccctggattcctccacgaaaggatcagtcaaatcatcagcaag
aatcaagccattgtcgaaacgctggatccaatttggcccaggcgatatgtccgccaatcc
agtcgagacaataaagaaacggccaaaagtccccggccggacattgtcatttcatctcca
tcaatcaagaaatccggtctagccggaagagaaagaagttgcagtttaagtttggttccg
catgcggatcagacgaccgactcgatggttctggccgtcccctcgtctgttgctccatcg
tcgacccaccgactgttgcaagaagatgaaaatcagaggaagagatgctactcggaaggt
ccagccgtcaccgaaattcgtcattccgtccggaatttattgcaacagtctcccaagccg
ccgcgaacggacgttttcaatccacaaaatccggaaggttccatcattaaggatattttg
ttaaaaagtcgcggattacttccggccaactgcgaggctaaagaatcggcggtggccgta
gtcgatccgccgacgaaaatgtcatcgtcattcaccgtgagtgctctactgaatccgtcc
acgacccgtgccaaacccacggtcgaatttccccatccacatatcagtttagatccggcg
gatgatccggcagaacggccgccatcaaaacgatccaagatttcagacgttacgcaatcc
gctccatttccacgtccgccagtcgatcctgaaatgatccgatcaacatcgtcgtcttct
tttgtggccgatcgaatccggacgtcgcttccgcttttcggaggtgaagtggagatccat
gacggtccccagaggacagtgttgcgaatcgatccggcgggttacgttgaatcaaatcga
tccaacggccaatctactgcaaccgccgagtcgccgtcctcagttgtcgtgacaaaagtg
tcgaatttaaataattccggtggtctatttcgtctgcaaccgcaggaatcccgcatttcc
gttttccccgtcatgaaaaccgccgaaaccaaatccggcggtgatccagcccgtggcgtc
atcattcatcaaccttccgtgccttatattccgggaattcccggcccctacagttcaagc
ggatggcttccggcttccaccatgacgtctgtcaccgtttcctacaccaccaccaccacg
gtgtgtaccagccaatcaacaacaacatcacaacgtccggttccatcgattacggtgcat
ccgccagccgctagtctcctacaacctccgcacccggaagagcgaacggatagcggattc
gacgatgaagatccatcgacccaggcgtcacccaaattccttcgccccaattctttatcg
ttgcagccgggcacgttcaatttgaaaaagaacaacatggccggcctggatccccagagc
ggacagcccaacatgctgtgcgtttcgggagcgggaatgacgctcatcagtcccgagacg
cctcgtccgcgcaagctatttcgccagttatatctcaacggccacgcctacacctatttg
ggcctcaaatgctcgaccagggtctatttttgctgcctgtcccgggcccagcccatgtac
gtcccgcatcatcccaaattgtccatgtattcgcaatggaagacgagagctccagcctca
gccggcccgccgggattggaagcctccagcccgactcaaaccatgtccctttacgattcc
agacaacgcccgacgacttgtacgacggcccaatcgaccgatcacggccggatgattttg
actcattcgtcttattggaccaatcgcgacagacccacaacgacgcatttcaaattgcaa
gtaaccgccgcccaggacgtcgttcacattgaaattcctcctcctcctcctgctcaatcg
actccggaagaatcccgtccgccggatcaagtcatcagtccaacggcccaggcccagacg
aaaccggttcaacccaaacgagtgcggatctttgccggcggctacaaatccaccgaggac
tacacgtacgttcgtggtcgagggcgaggccgttacgtgtgcgaagaatgcggcatccgc
tgtaagaagccatccatgttaaagaaacacatccgcacgcacacggacctgcgcccctac
acttgccgccaatgcaatttcagtttcaaaaccaaaggcaatttgactaagcacatgaaa
tctaaagctcaccacaaaaagtgcaccgagctgggcatcgtgcccgtccctaccaccgtc
gacgaggccaacattgacgaggacagtctggcccggcaggaaacgctcaaaaagatgaaa
ctggccggcgggtccggcaatgaaggcgattccgatttggacgacgatgaagatgaggat
gaagatgacgaggaagacgaagaaattgaaggtgaagaggaggaagatgaaacggaagat
gatccgccagtgacgactaaattattgccaactggacaatttgaagatgccacagcagcc
gaaccggttcgtgaagaacgtgagcaagaagtggccaggagtttactggatttaggtgtt
attgctccagctggatgtaaacccacgacttatccttacgccagccatttccatccgccg
gaagaggaacaacatccttcggttgaaatgaaggaagagcctccagcgcccgtttgtaaa
caacagccgatggatttatccacttcaaccgctgcttcatcggctcttttggcttccatc
tattcgcccatcgtgagcgaaacggccgctcgtcgattatctcccgaaaattccgtccag
ccggccaccagcggtatgctgcaagcttacctgacggaaaaagctttgaaggagggactg
atgaaacgtcaccaggtcaaattgatgactccgccctcagtcgtggtcgagaatcccgtc
gtcactttattcccgactcaatccaaatccagtcgttcggaatttgtggtgcctttgtcg
tcgacttgtccggcggccattccgacctcggtgacggcctacaaattgacagatgacggc
aaaacggcgtgcagcatttgcaacaaagttttcacgaaaccgtcgcaactgcgattgcac
atcaacatccattactttgagcggccgtttcggtgcgaggcctgcgccgtttccttccgc
accaagggccacctgcagaagcacaagcgatccgtgacgcatttcaataaagtcaacatg
aatttgactttcggcacgcccagcacggagaatcctcgaccgtttaaatgttccgactgc
atgatcgccttccgcattcacggccacctggccaaacatctccgctccaaaatgcacatc
atgaaactggaatgcctgggcaaattgccctttggcacttatgccgaaatggaacgatcg
ggaatcaatctcaacgaaattgacacgaccgattgccacaattcactcgaaagtctccaa
tcattggcccatcgtctctacaaacaagatccatccaaaatccagcaatggcaacaagag
gctcaagtggtagcagaggctaatttgagggaacggacaattagcgaatcgtcggaagaa
ttttcggatgttgcggatgatgagctggatgaagatggggaagatagcgacggcttgccg
gatggagccggtgtcgaagaagctcctcctccacgaaaattgacaccagttgaaacgctt
ccggcacagccagaaatgagccatccgcctcgtgctgctgccatgtctccagacgccaga
aaggctccgcccccgccaccagtcatgtattgttccgcttgcggagattcgtgcgtttcc
atggaagcgttccaatcacacgtcatggaaaaacatcggcctctgtcaccacctacgact
aggacacccttcaaggcttctcctcccgcaacggctcccgagtctcccgccaaattggca
ccaccgtccaacatccagccagacattggcagggtcgtcaatttggctgtggaatcgaga
cgatctccatcccgcgtgatggagactggccccaagcctggcccaccctggaaccgtggt
ccaggtgacctgcaatatgcacaaccccgtggtggcttttacggtggcccaccgcattca
tcttcgaccatgtggccaccaccacaaccgcgacagccaacaatcggtgacctcatgagc
ctgggcaatccgctgtcggctattccacctcagtggcatcaggatccagccgccatggcc
tggatcgcatcccgccacatgatgctgccgggtcatccgcccacttacactactccgcac
cactctggcggccatcacaccaccaacggagtagccatgcagccgcgcctctacagtccc
acctcctcgagttcttccatcgcagccaacgacgtcgacgtcgttttcccctgcgaactt
tgtggaaaatctttcaatgccaaagagacactccgacagcacatgttggctcacgctcaa
ccgcgaccgtttgtttgtgagttttgcgacgctgggttcacgactcagaagcaccttgaa
tcgcatctggttctgcatcggcctcgtacatcctga
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integrated database retrieval system
