Daphnia pulicaria: 124328500
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Entry
124328500 CDS
T08670
Name
(RefSeq) double-stranded RNA-binding protein Staufen homolog
KO
K17597
double-stranded RNA-binding protein Staufen
Organism
dpz
Daphnia pulicaria
Brite
KEGG Orthology (KO) [BR:
dpz00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
dpz01009
]
124328500
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dpz03019
]
124328500
Protein phosphatases and associated proteins [BR:
dpz01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
124328500
Messenger RNA biogenesis [BR:
dpz03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
124328500
mRNA cycle factors
Stress granule specific factors
124328500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dsrm
Staufen_C
DSRM_2
Motif
Other DBs
NCBI-GeneID:
124328500
NCBI-ProteinID:
XP_046643247
LinkDB
All DBs
Position
3:complement(13177894..13181157)
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AA seq
692 aa
AA seq
DB search
MNNVQERSAYESRNRDVKDQVFEPNWKMSGGAQEALIPVQGLELKNTIDEIHKIETFENV
GCIEKENRCESTDDTDFSMGLQDKSEQNGKKKTPMCLVNELARHHKIQPQYRLTEESGPA
HQKTFVVNLKLGEEQYSATGQSIKKAQHAAAELALKKTDYQVPEPKPKVKCMSNSQCDKP
ITPTVELNALAMKLNFQPVYTNLAPLSIKSKIQEDGEQSPVCKGDFRLNQVDQNERFLNA
DFQRQHTHTSQRFPSSSNQRYYFNRYQQAPVTHRVTLAVGHVFVTGEGLQPQAARHHAAQ
QALEQLRGQTLIDKVQLDEAAVISEANTDSDLKSPVSLVHELALKLNLTVEFTVLNESGP
PHMRNFIVQCKLGEVTTQGEGNCKKVAKRKAAEIMIDELKKVHPNGVLRPLEGNTVSPPR
IRVKNKSTIARKKPRNLVKDVTSASNGCLGTKPQDPISQLVQLQQARKEKEPVFTVLSER
GIPRQSPEFVVEVAVGSVTATGVGTKKKDAKRAAALKALDALGDSSKSSASSDTSVAVET
LLQDAPLSNSNCTGRQMVPGLLLLGGGQSRKIDSPFITDSSNATGIKETTQSSRPPKTSG
GLRPEIRLRYLAQVLEYEVEFSDFPKGKKGDFVSLVTLNTNPPQVSHGLGATLEEAHDNA
ASNMMKLLSEGSQDDTVGPNKENADQRSTGPQ
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
atgaataatgttcaagaaagaagtgcttatgaatcaagaaacagagatgttaaagatcag
gtatttgaacctaattggaaaatgtcaggtggtgcacaagaagccctcataccagttcaa
ggtctagagttgaagaacacaattgatgagatacacaaaattgaaacatttgagaatgtt
ggatgcattgagaaagaaaatcggtgtgaatctactgatgatactgatttctcaatgggt
ttacaagacaaatctgagcagaatgggaaaaagaaaaccccaatgtgtctagtcaatgag
cttgctcgccaccataagatacagcctcagtatcgtctgacagaggaatcaggacctgca
catcagaaaacatttgttgtgaacctgaaattgggtgaggagcagtatagtgcaactgga
caaagtattaagaaagcacaacatgctgctgctgaactagcccttaagaagactgattac
caagttcctgaacctaaacctaaagtgaaatgcatgtcaaactctcaatgtgacaaacct
attaccccaactgtggaacttaatgctttggctatgaagctaaattttcaacctgtatac
acaaatctggcgcctttgtctattaaatccaagatccaagaagatggtgagcaatcaccc
gtgtgtaaaggtgactttcgattaaatcaagtggatcaaaacgaaagatttttaaacgcc
gattttcagcgtcaacatactcacacgtctcagcgatttccctcaagctcaaatcagaga
tactactttaatcgttaccaacaagcaccagtgacgcatagagttactttagcagttggt
catgttttcgttactggtgaaggacttcaacctcaagcagcgcggcaccacgctgcacaa
caggcactggagcagttacggggccaaacgttgattgacaaagtgcaattggatgaggct
gcagttattagcgaagccaacacggactcggatttaaaatctcccgtctccttagttcac
gaattggcactaaagttaaatttaactgtagaatttacagttttgaatgagagtggaccg
ccccacatgagaaatttcatcgtgcaatgcaaactaggggaagttactactcaaggagaa
ggaaactgtaaaaaggtggccaaaagaaaagcagcagagatcatgatcgatgaattaaag
aaggtccaccctaacggagtcttgcgtcctttggaaggaaataccgtaagcccaccacgc
atccgcgtcaaaaataaatcaaccatcgccaggaaaaagccacgcaatttagtcaaggat
gttacatctgcatctaacggttgccttggcacaaaacctcaagatccaatatctcaacta
gttcaactgcagcaggcgaggaaagaaaaggaaccagtatttactgttttgtcagaaagg
ggaatcccccgtcagtcccccgaatttgttgtagaagttgctgttggctcagtaacggca
acaggtgttggaactaaaaaaaaagacgccaaacgcgctgctgctctcaaggcgctggat
gctcttggtgattccagcaagtcatctgcttctagcgatacatcagttgctgttgagacg
ctcttacaggatgcgccactctccaacagcaattgcacaggtcgtcaaatggttccgggt
cttcttttattaggaggcggacagagtaggaaaattgactctccattcataaccgattca
tcgaatgccactggaattaaagaaactactcaatcgtctcgtccgcccaagacttctgga
gggttgcgcccggaaatacgtctaaggtacttggcccaagtactggaatacgaggtcgaa
ttttccgattttccaaagggcaagaaaggagatttcgttagccttgtgaccttgaataca
aatcctccgcaagtgtcgcacggactgggtgccactttggaagaagcccatgataacgct
gcttccaatatgatgaaattgctttctgaagggtctcaagatgacaccgttggtcccaac
aaagaaaacgcagatcaacgaagcacaggaccccaataa
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