Daphnia pulicaria: 124328768
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Entry
124328768 CDS
T08670
Name
(RefSeq) DNA damage-binding protein 1-like
KO
K10610
DNA damage-binding protein 1
Organism
dpz
Daphnia pulicaria
Pathway
dpz03420
Nucleotide excision repair
dpz04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
dpz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
124328768
09124 Replication and repair
03420 Nucleotide excision repair
124328768
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dpz04121
]
124328768
03400 DNA repair and recombination proteins [BR:
dpz03400
]
124328768
Ubiquitin system [BR:
dpz04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Adoptor protein
124328768
DNA repair and recombination proteins [BR:
dpz03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
124328768
TCR (transcription coupled repair) factors
Cul4-CSA complex
124328768
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CPSF_A
Beta-prop_RSE1_1st
Beta-prop_RSE1_2nd
HGTP_anticodon
Motif
Other DBs
NCBI-GeneID:
124328768
NCBI-ProteinID:
XP_046643566
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All DBs
Position
1:15070967..15075995
Genome browser
AA seq
1158 aa
AA seq
DB search
MAHNYVVTAHKQTAVTSCVTGNFTSPNDLNLIVAKNYRLEIYLVTPEGLRPLKEVGIYGK
IAVMKLYKSGNDKKDSLFILTARYNAMILECSGEGENMEIITRTQGNVADKIGKPSETGI
IAIIDPDCRVIGLRLYDGLLKIIPLEKDSSEIKAYNIRIEELCIQDIAFLYGCANPTVVI
IHQDAHGRHVKTREISLRDKEFAKTSWKQDNVETEAAMLLPVPEPYGGALIIGQESITYH
NGQNYVTIAPPIIKQSTVTCYGKVDPNGSRYLLGDLAGHLFMLVLEKEEKMDGTVTVRDI
KIELLGEVSIPECLTYLDNGVVFIGSRFGDSQLVKLNVTPDDNNSYVTVMETFTNLAPIV
DMTIVDLDRQGQGQLVTCSGAYKEGSLRIIRNGIGIHEQASIDLPGIKGIWALKMGSSGN
PSVDDTVVLSFVGQTRVLMLNGEEMEETEIPGLTADQQTFFCGNVGKDSVLQITTGSVRL
ISVNTKQKLSEWTPPDGKMLNVVACNHGQVLCAAGRELYYLEMEDDTQVVLKTHVTLDYE
VACLDLTPISISSQQNTTVSKAEVCAVGLWTDISARLLKLPTLEEFHKEPLGGEIIPRSI
LMALFEGTPYLLVALGDGSLFYFSMNPVTKLLGDRKKVTLGTQPTVLRPFRSQSTVNVFA
CSDRPTVIYSSNHKLVFSNVNLKEVAHMCPLNSEAYPDSLVLATDTAVTIGTIDEIQKLH
IRTVPLGESPRRIAYQENTQTFGVITSRVDIVESSGLTPARQSASTQAQSVSSSSSLGSA
IKAPVSTRDSCGSGGGAEIGQEIEVYNLLIVDQHSFAVLHAHQFMQNEYALSIVSTRLGD
DVNPYYVVGTALVVPEESEPKQGRIVLFQWADGKLTTVAEKEVKGACYSLVDFNSKILAA
INNVVRLYEWTAEKELRLECSNFNHIIALYLKRKGDFILVGDLMRSITLLQYKTMEGSFE
EMARDSNPNWMSAVEILDDDTFLGAENSFNLFVCQKDSAATTEEERQQLTEVGRFHLGDM
VNVFRHGSLVMDHAAETLTTPTQGCVLFGTVHGAIGVVTQLPSEFYHFLSEVQTRMARVI
KPVGKIEHSFWRSFATERKVEPCEGFIDGDLIESFLDLSSDKMKEVATGLQMDDGSGMKR
EATVEDIIKLIEDLTRIH
NT seq
3477 nt
NT seq
+upstream
nt +downstream
nt
atggctcacaattatgtggttactgcccataaacaaacagcagttacatcatgtgttact
gggaatttcacatcacctaatgatcttaacctgattgtggccaaaaattaccgccttgag
atatatctggtgacaccagaaggtctcaggcctctgaaggaagtgggcatttacgggaaa
atagctgtgatgaaactatacaaatctgggaatgacaaaaaggactccctgttcatttta
actgctcggtacaatgccatgattttggaatgttctggggaaggagagaacatggaaatt
atcacaagaacacaagggaatgtagctgataaaattgggaaaccttccgaaacaggcata
attgctattatagatcctgattgcagagtcattggccttcgtttgtatgatggtttgctg
aagattattccattagaaaaggacagcagtgaaattaaagcctacaacatcaggattgag
gagctctgcatacaggatatagctttcttatatggatgtgcaaatcccactgtggtcatt
atccatcaagatgctcatggtagacatgttaagacgcgtgaaatttccttacgagataaa
gagtttgccaagacttcctggaagcaagacaacgttgaaaccgaggcagcgatgctgtta
ccagttccagagccctatgggggagccttgattattggtcaggaatccataacctaccac
aacggacaaaattacgtcaccattgccccaccaatcattaaacaaagtacagtcacctgc
tatggcaaggttgatcctaatggatcacgatacttactaggagatttagccggtcacctg
tttatgctagtgttggaaaaagaagaaaaaatggatggaacagttactgtgcgtgacatt
aaaatcgaacttttaggagaagtctcgattccagagtgtttgacttacttggacaatggt
gtagtttttatcggctcccggttcggagattcccagttagtcaagttgaacgtcactcct
gatgataacaattcctatgttacggtcatggaaacgttcaccaacttggcgcctatcgtc
gatatgaccattgtcgatcttgatcgacagggacaaggacaacttgtaacgtgttcagga
gcttacaaggaaggctcattgcgtattattcgtaacggaatcggtatacacgagcaagcc
agtatcgatctacctggtatcaagggaatatgggccctgaaaatgggttcatccggtaac
ccttcagtagatgatacagtcgtcctatcttttgttggacaaacaagagtgctgatgttg
aatggagaagagatggaagaaacagaaattcctggtcttaccgctgatcagcaaactttt
ttttgcggaaatgtcggaaaagattccgttttgcaaatcacgaccggtagtgtcagactt
atatccgtgaatacaaaacaaaaactaagtgagtggacacctccggatggaaaaatgctt
aatgttgttgcatgcaatcatggccaggtgctttgtgctgctggacgagaactttactac
ttggaaatggaagatgacactcaagttgttttgaagactcatgtaactctagattacgaa
gtggcttgcctcgatttgactcccatttcgataagctcgcaacaaaacacaaccgtctca
aaagctgaagtctgtgcagttggtctgtggacagatatttctgcgagacttctcaaatta
ccaaccttggaagagtttcacaaagagccacttggaggagaaatcatcccccgatctatt
ttaatggcactctttgaaggtacaccctacctgcttgtagcattgggtgacggatccctt
ttctatttcagtatgaatccggtcaccaaattgcttggtgaccgtaagaaggtaacattg
ggaactcagccgactgttcttcgaccatttcgatcccagtccactgtcaacgtttttgcg
tgctcagaccgaccgactgttatctattcttctaatcataaactggtgttcagcaatgtc
aatctgaaagaggtcgcgcacatgtgcccgctcaattcggaagcttatccagatagttta
gtcttggcaactgatacggccgttacgatcggaactattgatgaaattcaaaaacttcac
atccgtaccgtgcctcttggagaatcaccgcgtcgaatcgcgtaccaggaaaacacacaa
actttcggagtgattacatctcgcgtagacatagtcgaatcttctgggttgacccctgca
cgtcagtcggcttctacccaagcacagtctgtatcatcgtccagttcactgggatcggcg
atcaaagctccagtgagtacaagagactcgtgtgggagtggtgggggagccgaaatcggc
caagagattgaagtatacaacctgcttattgtcgatcaacactcatttgccgttctgcac
gcgcatcaattcatgcagaatgaatatgctctgagcatcgtttctactcgcttgggtgac
gatgttaatccgtattatgtagtcggaacggcactcgtagtaccagaagagtcggaaccc
aaacaaggcaggattgtactatttcagtgggccgatggtaaattgacaactgtagctgaa
aaagaggtgaaaggtgcctgctattccttggtggacttcaattcaaaaattttagccgct
attaacaatgttgttcggctgtatgagtggacagctgagaaagaattgcgacttgagtgc
agcaacttcaatcacattattgccttatacctcaaacgcaaaggtgactttattttggtc
ggtgatctgatgaggtctattactctgctgcagtataaaactatggaaggcagctttgag
gagatggcacgagatagtaatccgaattggatgtccgctgtcgagattctggacgatgac
acgttccttggagctgaaaattctttcaatctctttgtttgtcaaaaagatagtgcggca
acaacagaagaagaacgacaacagttgaccgaggttggccgctttcatctcggtgacatg
gtaaacgttttccgtcacggatctttggtgatggatcatgctgcagaaacgctcactacc
cctacacaaggctgcgtcttatttggaacggtccatggagccataggtgttgtgactcaa
ctaccgagcgaattttatcacttcttgtctgaggttcagacacgtatggcacgagtaatc
aaacctgttggaaagatagaacatagtttttggagaagttttgccacagaacgaaaagtt
gaaccgtgcgaaggatttattgatggggatttaatagagtctttcttggatttgtccagc
gacaaaatgaaggaggttgccactggcctacagatggatgatggaagcggaatgaaaaga
gaagcgacagtagaagatataattaaactgatagaagatcttacacgaattcattga
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integrated database retrieval system
