Daphnia pulicaria: 124328859
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Entry
124328859 CDS
T08670
Name
(RefSeq) LOW QUALITY PROTEIN: clathrin heavy chain 1-like
KO
K04646
clathrin heavy chain
Organism
dpz
Daphnia pulicaria
Pathway
dpz04142
Lysosome
dpz04144
Endocytosis
dpz05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
dpz00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
124328859
04142 Lysosome
124328859
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
124328859
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dpz04131
]
124328859
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
dpz04147
]
124328859
Membrane trafficking [BR:
dpz04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
124328859
Exosome [BR:
dpz04147
]
Exosomal proteins
Proteins found in most exosomes
124328859
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_COPA_B
TPR_PEP5_VPS11
TPR_Vps41
TPR_1
ANAPC3
Motif
Other DBs
NCBI-GeneID:
124328859
NCBI-ProteinID:
XP_046643630
LinkDB
All DBs
Position
3:complement(6641319..6646937)
Genome browser
AA seq
1402 aa
AA seq
DB search
MAQMLPIKFQEHLQLTSIRINAANIGFSTLTMESDKFICVREKVGETAQVVIINLHDPTN
PIRRPFTADSAIMNPACKVIALKAGRTLQIFCIGTESMMRFHTMTEDVVFWKWISVNTIV
LVTEGAVYHWSMEWLSLPLKMFDRHSSLTGCQIINYRTDAKQTWLLLIGQSTHQNRVVGA
MQLYSVERKVSEPIEGHAAAFSQFKMEGNPELSTLFCYAVRSAQGGKLHISEVGTPPTGN
QPFAKKNVDVFFPPEAQNDFPVAMQVSPKHDVLYLITKYGYIHLYYMETGXIYMNRISAE
TVFVTAPHEPSSGIIWVNRKGQVLSVSVDEDTIIQYITTAMQNPDLALRIATRNNLAGAE
ELFVRKFNTLFQGEQYAEAAKVAANAPKAILRTPATIQRFQAVAAQPGQTFPLLHYFEIL
LDQGQLNKFESLELCRPVLQQGRKQLLEKWLKEDKLECSEELGDLLEQAGPTFGSLALSV
YLRANVPNKVIQWFAETGQFSKIVLYAKIVGYTPDYVFLLRSVMRISPDQGAMFAQMLVQ
DDEPLADIAQIVDIFLEENMVQPCTAFLLDALKNNRPAEGPLQTRLLEMNLLSAPQVADA
ILGDQMFTHYDXAHVAQLCEKAGLLQRALEHYTDLYDIKRAVVHTHLLNPEWLVNYFGSL
SVEDSLECLRAMLQANIRQNLQIGVQIATKYHEQLSTNSLIELFESFKSFEGLFYFLGSI
VNFSQDPEVHFKYIQAACKTGQIKEVERICRESNCYNAERVKNFLKEAKLTDQLPLIIVC
DRFDFVHDLVLYLYRNSLQKYIEIYVQKVNPSRLPVVIGGLLDVDCSEDVIKSLILVVRG
QFSTDELVEEVEKRNRLKLLLPWLGSRIHGGSVEPATHNALAKIYIDSNNNPERFLKENG
YYDSRVVGKYCEKRDPHLACVAYERGQCDRELIKVCNENSLFKSEACYLVRRRDPDLWVE
VLNESNQFRRHLIDQVAQTALSETQDPEDISVTVKAFMTADLPNELIELLEKIVLDSSVF
SDHRNLQNLLILTAIKADHTRVMEYITRLDNYDAPDIANIAISNQLYEEAFAIFKKFDVN
ASAIQVLIENVNNLDRAYEFAERCNEPAVWSQLAKAQLQQGLVKEAIDSFIKADDPSAFL
DLVSTSHRTGSWEDLVRYLQMARKKARESFIESELIYAYARTNRLADLEEFIAGPKHADI
QRIGDRCYDDGMYEPAKLLYNNVSNFARLAITLVHLKEFQGAVDSSRKANSTRTWKEVCF
ECVDNKEFRLAQMCGLHIVVHADELEDLINYYEDRGYFEELINLLEAALGLERAHMGMFT
ELGILYSKYKPEKMREHLELFWSGVNIPQVLRAAEQEHWWADLVFLYDKYEEYDNAVLTV
MQHPTQXQDVITKVANIELYYK
NT seq
4209 nt
NT seq
+upstream
nt +downstream
nt
atggctcagatgttacccatcaagtttcaagagcatctacagctcacaagtataaggatc
aatgctgccaacatcggattcagcactctcaccatggagtcggacaaattcatctgtgtc
cgagagaaggtgggagaaacagcacaggtggtcatcattaacttgcatgatccaacaaac
cccatcagaaggccattcactgcagattcagccatcatgaatccagcctgcaaagtgatt
gctctaaaggctggaagaaccctccagattttctgtattggaactgagtcaatgatgagg
tttcacaccatgacggaagatgtggtgttttggaaatggatttctgtaaataccattgtc
ttagtcaccgagggtgccgtctaccattggtccatggagtggctttctcttccgctgaaa
atgtttgaccgccactccagtttgacaggctgtcaaattatcaactatagaacggacgcc
aagcaaacgtggctacttcttattggccaatccacccaccaaaatcgcgtcgttggagca
atgcaactttactctgtcgaaagaaaagtcagcgaacctatcgaaggtcacgctgctgcc
ttctcacagttcaaaatggagggaaatcctgaactttctaccctgttttgctacgcagtc
agaagtgctcagggcggaaagttgcatatcagtgaagtaggaacgccgccaaccggaaat
cagccttttgcgaagaaaaatgtcgatgttttcttcccacccgaagcccagaacgacttt
cccgtagctatgcaggtcagcccgaaacacgacgtactgtatttgattacaaagtatggc
tacattcatttgtattacatggagactggtnatatctacatgaaccgaatttcggcagaa
actgtattcgtcaccgccccacacgagccctcttcgggtatcatttgggtcaatcgcaaa
ggccaagttttatctgtcagcgttgacgaggataccatcatccaatacatcacgacagcc
atgcaaaatccggatcttgcgttgcggattgctacgcgcaacaatcttgctggggctgag
gaactttttgtccgaaaattcaacacactcttccagggtgagcagtatgccgaggccgct
aaagttgccgccaatgcaccgaaggccattctgagaacaccagccacaatccagcgcttc
caagcagtggccgctcagccaggccaaactttcccgctattgcattattttgaaatcttg
ttggatcagggacagttaaacaaatttgagtccttggaactatgtcgtcccgttctgcag
caaggtcgcaagcagctgctagaaaagtggttgaaagaggataaacttgaatgctctgaa
gagctcggtgacttgttggaacaggccggtcctactttcggttctctggccctatcggtt
tacttgcgagcgaacgtgcctaacaaagttattcagtggtttgctgaaactggacagttc
tccaaaattgttctgtatgcaaagatagtgggttacacgcccgattatgtgttcctgcta
cgtagtgtcatgcgcatcagtcccgatcaaggagcaatgttcgctcagatgctggtgcaa
gacgatgaaccgttagccgacattgcccaaattgttgacattttccttgaggaaaacatg
gtccaaccgtgcacggcgttccttttggatgcattgaagaacaaccgtccagccgaaggg
ccattacagaccagattgctggagatgaatctcctttctgctcctcaggtggccgacgct
attttgggtgatcaaatgtttacccactatgacnnagctcacgttgcacagctatgcgaa
aaggccggtcttcttcaaagagctttagagcattacaccgatttgtacgatatcaagcgt
gctgtggtccacactcaccttctaaacccggaatggttggtgaactacttcggttcattg
tctgtcgaggattctttggagtgtcttcgtgctatgctgcaggctaacattcgtcagaac
ctccagattggcgttcagatcgccaccaagtaccacgaacaactttcaacgaattcgctg
atcgagttgtttgaatccttcaagagctttgagggacttttctacttcttgggatctatt
gtgaacttcagccaagatccagaagtacatttcaagtacattcaggccgcctgcaagact
ggacagatcaaagaagtggagcgaatttgtagggagtcaaattgctacaatgctgaaaga
gtcaagaacttccttaaggaggcaaaactaactgatcagttgccgttaattatcgtgtgc
gatcgttttgatttcgtccatgatttggtgctctatctataccgaaatagccttcaaaag
tacattgaaatctatgtgcagaaggtgaatccttctcgtttgcccgtagttatcggcggt
ctgctagacgttgactgctcggaagatgtcatcaagtccctaatcttggtcgtgcgtggc
cagttctcaaccgatgagcttgtagaagaggtagagaagaggaatcgtcttaaattgctc
ttgccctggttggggtcacgaatccatggtggatcggtcgaacctgccactcacaacgcc
ttggctaaaatttatatcgacagcaataataatcctgagcgcttccttaaggaaaatgga
tactacgacagtcgcgtcgttggaaaatactgtgagaagcgtgatccacacttggcttgc
gttgcctacgaacgtggccaatgtgatcgtgagcttattaaagtttgcaatgagaattcg
ctcttcaagtcggaggcttgttacttggttagacgtcgcgatcccgatctttgggtggaa
gtgttaaacgaaagcaaccaattcagacgtcatctcattgaccaagtggcccagacagcc
ttgtcagaaacacaggatccagaagacatttccgtcacggtcaaggccttcatgacggct
gatttgcccaacgagttgattgagttattggagaaaattgttttggacagctctgtgttc
agcgatcatcgtaacttgcagaatctcctcatcttgacagctatcaaagccgatcatact
cgggttatggaatacattacccgtttggacaactacgacgcgccagacatcgcaaatatt
gccatctccaaccagctctacgaagaggcctttgccatcttcaagaaatttgatgtcaat
gcttccgctatccaagtattgatagaaaacgtcaacaatttggatcgtgcttacgagttt
gccgaacgctgtaacgaaccagccgtatggtcacagttggccaaagcgcaacttcagcaa
ggtttggtcaaggaggctattgattcgtttattaaagccgatgatccttcggcctttttg
gacctggtctcgacttcgcatcgtaccggcagctgggaggatttagttcgctacctgcag
atggctcgcaagaaggcgcgtgaatcgttcattgaatctgaattgatttacgcctatgcc
cgcaccaaccggcttgctgacttggaagagtttatcgccggcccgaaacatgccgacatt
caacgaattggtgaccgttgctatgatgacggaatgtatgagccagctaaactactgtac
aataatgtttcgaattttgctcgattggccattactttggtacacttgaaagagttccag
ggagctgttgattcgtcccgtaaagccaacagcacacgtacatggaaggaagtctgcttt
gaatgcgttgataacaaagaatttcgtttggcacagatgtgcggtcttcacattgttgtt
cacgccgatgaattagaagatttgataaactactatgaggatcgtggatattttgaggag
ttgatcaatttgcttgaagcagctcttggattggaacgcgctcacatgggtatgttcact
gaattgggtatcctctactcgaagtacaaaccggagaaaatgcgcgagcatctcgaactc
ttctggtcaggtgtcaacattcctcaagttctacgcgctgctgaacaggaacattggtgg
gctgatttagtcttcctctacgacaaatacgaagaatacgataatgctgtcttgacagtg
atgcaacacccaactcaanngcaagacgttattaccaaagtggccaatattgaactctac
tacaagtaa
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