Daphnia pulicaria: 124329012
Help
Entry
124329012 CDS
T08670
Name
(RefSeq) F-box DNA helicase 1-like
KO
K10300
F-box DNA helicase 1 [EC:
5.6.2.4
]
Organism
dpz
Daphnia pulicaria
Brite
KEGG Orthology (KO) [BR:
dpz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dpz04121
]
124329012
Enzymes [BR:
dpz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
124329012
Ubiquitin system [BR:
dpz04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
124329012
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD_C
UvrD_C_2
UvrD-helicase
Viral_helicase1
F-box-like
F-box
AAA_19
AAA_30
AAA_22
ResIII
cobW
Motif
Other DBs
NCBI-GeneID:
124329012
NCBI-ProteinID:
XP_046643869
LinkDB
All DBs
Position
3:complement(9271582..9276130)
Genome browser
AA seq
968 aa
AA seq
DB search
MNNLPVQVLENILSHIPVIDLHKSCVLVCQNWREIICRKKFIPWKKLYLSYSLNVEESTA
FLDQLCDSYNITGVQNCLRGLIFYFLEFTGSPVNTMRYLKSHTRFSLAERLVVEQYKTTS
LWGITAMICIISNDTWEMYRLFDLLTHSESDFTTMEVMEKFYCLCTLFLYFHRKFGIPAK
LHYNLMYALNLFENRWTGAPISQVSNQSSSQQKSSPPPLTHEQSRIVNHRIQKDDLIKIV
AFAGSGKTTTLLRFTENNPKTRFLLIVYNRAVSDEAGGKFPNNVKCRTIHQLAYRHIIAT
GLMKNKKLGNIFPTSLVESHILQKDRRGLKRYQREKLVLDTLNRFWGSADDTITPDHAPT
KISSKSSSEDNTPGENVVEDRILTLDDRQKLAADAKQVWSVIKNPNDRRLKLPCDAFLKL
WQLEKPNLFETEEVDCVMVDEGQDLNGAMLDIFLSNIGPRIIVGDPHQQIYRWRYAVNAL
NKVPATHTFYLTQSFRFGPEIGFMANSCLSVLNNVNDKCLVGIDVHDALSDANDKLNHQL
QNNGKICYLARTNLALFKKVVEVIGCEFGSSSQKPKISFAGGIQNMGLDLIMDVYNLWRG
AYDNITSPFLRNRRLFENFTSFTKYVEATMDMEWGARIAQVTWAKSKTEMYVDAIRKSHV
YISDADVVFSTAHKSKGMEWDTVVLLDDFIPTLAYGEVSGEEQEERNLLYVAVTRAKRKL
IINPACYYTLLAVGDRREKIVDSATYLDAHGPIAICFRCQEVLPGQCKTKSASLVTTPLK
IMTLNNEPTVGNRKEGILCSLCAGLNYYAYQKFSCYEHELRQVQVKNDMGHLTFRFLVGP
SADEMAVAVPYYVQQRLLMLDGFVQARHLAQQRPPIVVNNREELFPDDDNMFLEVVANVG
DIGVDNEVIEPIAPVLLNGQLQGVEVFPDDDDMFPLDDQAAEVEQSPRPETDDDDDSYRN
VLLLRLSQ
NT seq
2907 nt
NT seq
+upstream
nt +downstream
nt
atgaataatcttcctgttcaagtgcttgaaaatattttgtcccacatacctgttatagat
cttcataagtcatgtgtgcttgtgtgccaaaattggagggaaatcatttgtcgaaagaag
tttataccttggaaaaaactttatctttcatacagcttgaatgttgaggaatctactgct
ttcctggaccaactctgtgattcatacaacattacgggagtgcaaaactgtctccgtggt
ttgattttctattttttggagttcactgggtctcctgtgaataccatgaggtatttgaaa
agtcatacccgcttcagtttagctgaaagattggtggttgagcagtataaaactacttca
ctctgggggattactgctatgatttgcatcatctcaaatgatacatgggaaatgtataga
ttgtttgatttattgacacattctgaaagtgatttcacgacaatggaggtaatggagaaa
ttttactgtttatgcactttgtttctctacttccacagaaagtttggaattccagctaag
ttgcattataatttgatgtatgccctcaacttgtttgagaatcgctggacgggtgcccct
attagtcaagtgtcaaaccagtcatcaagccagcaaaagtcttcacctcctccattgacg
cacgaacaatcgcgtattgtaaatcatcgcatccaaaaagatgatttaatcaagatcgtg
gcgtttgctgggagcggtaaaactacaactctgctacggttcaccgaaaataatccaaaa
accagatttctgctcattgtgtacaatagagcagtgtccgatgaagccggcggaaaattt
ccgaataacgtaaaatgcaggacgattcatcagttggcttatcgccacatcattgctact
ggcttgatgaagaataaaaaattgggtaacattttcccaacgagtttagttgaaagccac
atacttcaaaaggatcggcgaggactaaaaagatatcaacgagagaaactggttcttgac
acccttaatcggttttggggttcggccgatgatacaataactcctgatcatgcgcccacc
aaaatcagtagcaaatcgtcatctgaagataatacccctggagaaaatgttgttgaagac
agaattctgaccctcgatgaccggcagaaattagcggccgacgccaaacaagtttggtct
gtcattaagaatccaaatgataggcgtctgaaattgccgtgtgatgcattcctaaaactt
tggcagttggaaaaacctaatttattcgaaactgaagaagttgactgtgtgatggtggat
gaaggccaagatttgaacggagccatgctcgatatatttcttagcaacataggccctcgc
attatcgtcggagatccacatcagcagatctaccgttggcgatatgccgtgaatgcactg
aataaagtccctgctacccacacgttttacttgacacaatcattccgatttggaccagaa
attggtttcatggccaactcctgtctatccgtcttgaataatgtcaatgataaatgcttg
gtaggtattgatgtgcacgatgccctgagcgatgccaatgataaactaaaccaccaactg
caaaataacggcaagatttgctacctggctaggaccaacctggcacttttcaagaaagtc
gtggaagttattggttgtgaatttggtagcagttcccagaagcctaaaatctcttttgcc
ggaggaattcagaacatgggattggaccttataatggacgtttataacctttggagagga
gcctatgacaacattaccagtccctttctacgtaatcggcggttatttgaaaacttcacc
agtttcaccaaatacgtagaagccaccatggacatggagtggggagcgagaatagctcaa
gtgacctgggcgaaaagtaaaacggagatgtatgtcgatgcgattcgaaaatctcatgtc
tacatttccgatgcagatgtcgttttctctaccgctcacaaatccaagggaatggagtgg
gatacggtcgttttgctagacgacttcattccaactcttgcttatggtgaagtaagcggc
gaagagcaggaagagcggaacttgctgtacgtggctgtcacgcgggcaaaacggaaactg
ataatcaatccagcctgctactacactctcttggcagttggcgatcgtcgagagaaaata
gtcgattcagccacttacctcgacgctcatggcccgattgccatttgttttcgctgccaa
gaagttctgccagggcagtgcaaaactaaatctgcatcgctcgttacaactccactcaag
ataatgaccttaaataatgagccaactgttggaaatcgaaaggagggcatcctctgttcc
ctatgtgccggactaaattattacgcgtaccaaaagttcagctgttacgagcatgagtta
cgccaggtccaggtcaaaaatgacatgggacatttgacatttcgtttccttgttggacca
tcggctgacgaaatggctgttgctgttccttattatgtgcagcagagattgttgatgctt
gacgggttcgtccaagctcgacatttagcccaacaacgtccgcctattgtagtgaacaac
cgagaagaacttttcccggatgatgacaatatgttccttgaagtcgtagccaatgtgggt
gacattggtgttgataatgaagtgatagaacctatagctcccgtgctattgaatggtcaa
ctccagggtgttgaagtattcccagacgacgacgacatgtttcccctggatgatcaagca
gccgaagttgagcagtcaccgcggccggaaactgacgatgatgacgattcctatagaaac
gtgttacttcttcgactctcacagtga
DBGET
integrated database retrieval system
