Daphnia pulicaria: 124329055
Help
Entry
124329055 CDS
T08670
Name
(RefSeq) F-box/LRR-repeat protein 6-like
KO
K10272
F-box and leucine-rich repeat protein 6
Organism
dpz
Daphnia pulicaria
Brite
KEGG Orthology (KO) [BR:
dpz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dpz04121
]
124329055
Ubiquitin system [BR:
dpz04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
124329055
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_4
F-box-like
LRR_At5g56370
Pox_Ag35
F-box
LRR_FBXL18
NOMO1-like_9th
DUF5870
BSP_II
Motif
Other DBs
NCBI-GeneID:
124329055
NCBI-ProteinID:
XP_046643959
LinkDB
All DBs
Position
3:9224161..9227789
Genome browser
AA seq
633 aa
AA seq
DB search
MDTAVSPIDLPLLPTPSTSSASPSVELRHDFEVLSSNATDFSSAHTSPDDFRNSHSKECE
VMCPEPKSNIADSLKIPQRKQQRPCPVVYESQISPELEGIKLKIKKSPTQEVLHQSTSTA
ATGAKNRPKTVRLKTPRARKPAATKAGAKGRKRKRRKKGQSDDGTDEEEEEEDQNYFLDV
NGSSAGHTNDNNGAQSVWANERMPPEILFKIFMEVTYTEGCVPTLVMLSHVCRLWWEVST
DPLLWHTVDLATGRVNEKYRTERKLVWLLQNRLSRVQDLALGGWNSALSRAAVEGLSQTC
NDLQALSLNGCKGLMGESLLNVIQNCKSLQRLDLSAISPYTANPRGAISSGTLCELSKVM
GSRLSHLNLANNCTTGIQQIVVALAVSCPNLQVLDLSNLRTATRDTVCINIEQLQEGCPK
LRVLRLTNSLIRLSATPLKDQAASLGFPHLEELSIAVDPKAYISLDNASIERILKNAHKL
RLLDVRGCISITNSSLVRVPAWDLEHLFLSGCTATRHSADGLELVIRKWRHSLIEIDLSW
TSVSEALDQAVMALAEDSDSPLKVLDLCGSSVSFPPIRQVLCHCTRLRTLNLSSCRALPR
GIKRLYDGVTQLSLLRTAIQAGRFDDNNDQADD
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
atggatacagcagtcagtccgatagacctccccttgttacccactccttcgaccagttct
gctagtcccagtgttgagctcaggcatgactttgaagttctcagtagcaatgctactgat
ttctcctctgcacacacaagccctgacgatttcagaaactctcactcaaaagaatgtgaa
gtgatgtgtcctgaacccaagagtaacatcgcagacagcctaaaaatccctcagcgtaaa
cagcaacgaccctgcccagtggtgtatgaaagtcagatatcaccagagctagaaggaata
aaactcaagattaaaaagtctccaactcaagaagtgttacatcagagcacatctacagcg
gcaactggtgcgaaaaacagacccaaaactgtcagattgaaaacacctagagcccgaaaa
ccggcggcgacgaaggcgggtgccaaaggcagaaaacgtaagagaaggaagaaaggccaa
tccgacgatggaacggacgaggaagaagaagaagaggatcaaaattatttcttggacgtg
aacggctcatcggcgggacacactaatgataacaatggagctcaaagtgtttgggcaaat
gagagaatgcccccagaaattttgttcaagattttcatggaagtgacttatactgaagga
tgcgttcctacgttagtcatgttatcccacgtttgtcgcctgtggtgggaagtttctacc
gatccattattatggcatacggttgacttagctacaggaagagttaacgaaaaataccga
acagagcgtaaacttgtttggctccttcagaatcggttgtcccgcgtccaagatttggct
ttaggtggatggaattctgcattgagtcgtgctgcggttgagggcttgtctcaaacctgc
aatgatctccaagcgctgagccttaatgggtgcaaaggtttgatgggtgagagtctactg
aacgttatacaaaactgcaaaagcttacaaaggcttgatctgtcggccatctcgccttac
acggccaatccacggggcgccatttctagcggaaccctgtgtgagttatctaaggtaatg
ggcagtcgactgtcccatttgaatttggcaaataactgcacgacgggaatccagcaaatt
gtcgtcgctctagcggtttcttgtcctaatctgcaagtgttggacttgtcgaacctccga
acagcaacgcgggatacggtttgcatcaacatcgaacaattgcaagaaggttgtccaaag
ttgagggtcttgcgtttgactaacagcctcatccggctctcggccacacctctcaaagac
caagccgcctcactgggatttcctcacctagaggagcttagcattgccgtcgaccccaag
gcctacatctcgctggataatgcttcaattgaacgtattcttaagaacgcccataaactc
cgtctgctagacgtccgtggatgtatatccattaccaattctagtttggtacgtgttccg
gcctgggatctcgaacatctatttttatcaggctgtactgctacgcgccactcagccgat
ggattagaattagtaatccgcaaatggcgccatagtctgatcgaaatcgatctctcctgg
acatctgttagtgaagcactcgatcaggccgtcatggcacttgctgaagactcagattca
cccctcaaggttttagatttgtgtgggtcatcggtcagctttccgcccatccgtcaagtg
ttgtgtcattgcactcgattgcgtacgttgaatctttcttcttgtcgtgctctcccgcgt
ggaattaaacgcctttatgatggcgtaactcaactttccttgttgagaacggctattcaa
gccggccggtttgacgacaataatgatcaagccgacgattga
DBGET
integrated database retrieval system