Daphnia pulicaria: 124329079
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Entry
124329079 CDS
T08670
Name
(RefSeq) sonic hedgehog protein A-like
KO
K11988
sonic hedgehog
Organism
dpz
Daphnia pulicaria
Brite
KEGG Orthology (KO) [BR:
dpz00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
dpz01002
]
124329079
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
dpz00536
]
124329079
Peptidases and inhibitors [BR:
dpz01002
]
Cysteine peptidases
Family C46: hedgehog family
124329079
Glycosaminoglycan binding proteins [BR:
dpz00536
]
Heparan sulfate / Heparin
Morphogens
124329079
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HH_signal
Hint
Peptidase_M15_3
Mucin
Motif
Other DBs
NCBI-GeneID:
124329079
NCBI-ProteinID:
XP_046644012
LinkDB
All DBs
Position
3:complement(7986121..8013733)
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AA seq
571 aa
AA seq
DB search
MMASFVECWSSAGRPTCSSEEAGHVRTRRRRISVGVCSDCGGDGVERPTKSSASSCSSST
TTTSATTTTSSRRPHSSRRRSPGSSSSSAGCCYWLLVLLVVLSALLPSPATACGPGRGAN
RRRSPRKLTPLVFKQHVPNVSENTLGASGLTEGKITRDDPRFQQLVPNYNTDIVFKDEEG
TGADRLMTQRCKEKLNTLAISVMNQWPGVKLRVTEGWDEEGLHATNSLHYEGRGVDITTS
DRDRSKYGMLARLAVEAGFDWVYYESRAHIHASVKSESSQAGRHGGCFPPESTVLSESGG
VKKLSELSVGDRIQSMDSQGRLVFSPVLLFLDRDLSEERDFVQLLSADGASVTMTASHLI
YTVASQDLLEDVDVDLMNGQLQSNSLHSGENSSAEEEDRLLDQMMANATMDRFGTRLKAT
FASKVQIGDWIVSTGPDGRPKPQRVVGVSAVTQRGVLAPLTEEGTLVVDQVVVSCYAVID
DQTIAHWAFAPVRLLNNVHKSLVHFWRALSWWNHDRTESASGSSIPVRISVEAERSSTSE
SKPPTLVGIHWYAKMLYRIARFVLPSHLVFN
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
atgatggcgtcgttcgtcgagtgttggtccagtgctggaaggcctacgtgctcatcagag
gaggccggtcacgttcggactcggcggcggcggataagcgtcggcgtctgcagcgactgt
ggcggtgatggagtcgagcgtccaaccaaatcatccgcgtcgtcttgttcctcctccacc
accaccacctccgccaccaccaccacctcatcacgacgccctcacagcagcagacgtcgc
tcgcccggctcgtcatcttcgtcggccggttgctgttattggctcctggtcctgctggtg
gtgttgagcgcgttgctgccgtcgccggccacggcctgcggtcccggccgaggcgccaac
cgccgccggtcgccgcgcaagttgacgccgctcgtcttcaaacagcacgtgcccaacgtg
tcggagaacacactcggcgctagcggactcaccgagggcaagataacgcgcgacgatccc
aggttccagcagctcgtgcccaactacaacacggacattgtcttcaaagacgaggaagga
acgggagccgatcgactcatgacccagagatgcaaagagaagctcaacacgttggccatt
tcggtgatgaaccagtggccgggcgtgaaactgcgcgtgacggaaggctgggacgaggaa
ggcctgcacgcgaccaactctttgcactacgagggacgaggcgtggacatcacgacgtcg
gatcgcgaccgctccaagtacggcatgctggcccgtctggctgtcgaggccggattcgac
tgggtctactacgagtcgcgggctcacattcacgcttcagtcaaatcagaatcttctcaa
gccggtcgtcacggaggatgtttcccgccggaatcgaccgttttgagcgagagcggcgga
gtcaagaaactgtctgaattgtcggtgggcgaccggatccagtcgatggactcgcagggc
cgtttggtcttcagtcccgtcttgttgttcctggaccgcgacctgagcgaggaacgggat
ttcgtccagctgctttcggccgacggtgccagcgtgacgatgacggccagccacctgatc
tacacggtggccagccaagatttactggaggatgtcgacgtcgacttgatgaacggacaa
ctccaatccaacagtttgcactcaggcgagaacagcagcgccgaagaggaagaccgattg
ctggaccagatgatggccaatgccacaatggaccgtttcggaacccgcctgaaggccacc
ttcgcctccaaagtgcaaattggcgactggatcgtttcgactggccccgacggccgaccc
aagccgcaacgggtggtcggcgtctcggccgtgacccagcgaggagttctggcaccgctg
accgaggaagggacactggtggttgaccaagtcgtcgtctcctgttacgccgtcattgac
gaccagaccatcgctcactgggcattcgctcccgtccgtctcctcaacaacgtccacaag
agtctggtccacttctggcgagccctcagctggtggaatcacgaccggacagaatcagcg
agcggcagcagcatcccagtcagaataagcgtcgaggctgagagatcgagcaccagcgag
agcaaacctccgacgctagtgggcatccactggtacgccaaaatgttgtacaggatagcg
cgatttgtactgcccagtcatctggtcttcaattga
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