Daphnia pulicaria: 124329327
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Entry
124329327 CDS
T08670
Name
(RefSeq) laminin subunit gamma-1-like isoform X1
KO
K05635
laminin, gamma 1
Organism
dpz
Daphnia pulicaria
Pathway
dpz04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
dpz00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
124329327
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_N
Laminin_EGF
Laminin_B
JAG1-like_EGF2
Motif
Other DBs
NCBI-GeneID:
124329327
NCBI-ProteinID:
XP_046644321
EnsemblRapid:
LOC124329327
LinkDB
All DBs
Position
3:complement(10293217..10309235)
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AA seq
1627 aa
AA seq
DB search
MMSVVSLLASLLLVTSQAVTAQSQLIGSDDGTNQQSGNRCIDDEQNPQRCIPDFVNAAFN
GRVEATNTCGLYGPSEFCTQTGAKGPEKSCDICDARVSHLAHPADYLTDFNNNDNITWWQ
SDTMLEGIQYPTQVNLTLNLRKAFDITYIRVKFQSPRPESFALYKRTSEDGPWLPYQFYS
ATCRDTYGLPDSNFVRRDDEKRALCTSEFSDISPLTGGNVAFSTLEGRPSAYNFDESKEL
QDFVTATDIRITLDRLNTFGDEVFGDPKVLKSYFYAISDFAVGGRCKCNGHASECVSSSS
EDGSYSNLVCRCEHSTAGRDCQECLPFYNDRPWARATADDANECLPCNCNGFSSRCYFDQ
ALFDATGHGGHCLDCTANRDGPNCERCREQFYQREDNYCVPCNCDETGSRSLQCNREGKC
SCKPGVTGDKCDRCEENFYDFGPQGCRPCGCNVAGSLGGQPRCDSETGSCSCKDHVEGQR
CDRAKPGYFNLDAENLFGATPCFCYGHSSVCRSATGYARGLIESVFARSDEKWSALEQPG
NRPITLAYNSLLGNIGVSAPGRDAVVFSAPERYLNDQRTSYNQQLHFTLRTNEAGARASI
DDVVLEGSGLTISQPIFGQGNQLPSASNQVYSFRLHEHPDYGWNPRLSSRDFISVLANLT
AIRIRGTYTPRGAGYLDDVKLETARRGGSGSPANWIERCNCPEGYVGQFCESCAPGFRHE
PANGGPFARCVPCNCNGHADICDAESGRCICQHNTAGDNCERCARGFYGNALQGTPNDCN
PCPCPNGGACIELADETVVCLECPVGYAGPRCELCSDGYFGDPEGRFGTRRPCQPCDCNG
NVDPNAVGNCNRTTGECLKCIYNTAGYRCDSCLAGFFGDALALNKGDCRPCQCFRRGTLQ
LPSGTLQCDQVSGQCECKPNVMGNNCDRCLDGFFDLESGNGCQTCNCDPVGALNRTCNVR
NGQCFCRPGVVGLRCDSCAPNQFGFSYDGCKPCECDTIGSLSLQCDDPDGQCRCRDNVEG
RRCDRCKENKHDREAGCKDCPPCYNLVQEAVDQHRAKMADLATILQRIISNPTIIADLDF
DRKLAEVQDRVDQLWVDAKMQSGGDKSISIQLEELKNRLKQVQQMTGEIEMRTQSSRRAT
AAGVGNLTVAEAAVERARESLKSAQRYLETEGSDALQRAIQRSEKFGQQSERMSQIARDA
RQAADQLDDSAALIESTAQEALNTSSSAYQLAREAVDQQKNSTEEIGGLRKELTITEQTL
ARTQAMAKEALTNAQSAYTEALSLLGDAYSLVVPNVEWQFMKRQAAQHSEESRQIKTEAD
QLAAENANMLDEVSDQIIGAGDVLAKGVAQQQIADELLADADVALGRSQEAVSLGEKTLA
EAQKTLETLEGFDSLVQESKEKARDALGQAVEITNLIEQAEERTREAQNALAGAESDARV
ARDSAKQAQEHAEQASKDAVMIRQGASETRDKAGQLKDTAESLTASVADTANRMRTLEAE
AAEDQGLAKEALEKANQAKSISADSTVKVREAISSVNEILISLNNMGNIDTAALDELERK
LIIAERDFIESDIERRIEEMRTARVTQNQWVRDYEEELARLRLEVDNVEAIKEALPEGCW
KRLKLEP
NT seq
4884 nt
NT seq
+upstream
nt +downstream
nt
atgatgagtgtcgtttctttgctggcctcgttgctcctcgtgaccagccaggctgtgacc
gcacagtctcagctgattggcagcgatgacggaaccaatcaacaatctggcaatcgttgc
atcgacgacgaacagaatccgcagcgatgcattcccgatttcgtgaacgcggctttcaac
gggcgagtggaagcgaccaacacctgcggcctgtacgggccgagcgagttctgcacgcag
acgggagccaaaggaccggagaaatcgtgcgacatttgcgacgcccgcgtttcgcatttg
gcccatccggccgattacctgaccgacttcaacaacaacgacaacatcacctggtggcag
tcggacacgatgctggagggcatccagtacccgactcaagtcaacttgaccctcaatctt
cgaaaggcattcgacatcacatacattcgtgtcaaatttcaatctccccgcccagagagt
ttcgccctctacaagcgaacgtcagaagatggaccttggttgccctatcagttttacagt
gctacatgtcgtgacacttacggactgcctgacagcaacttcgttcgacgtgatgacgaa
aaacgtgccctgtgcacgtctgaattttctgatatctcaccgttgactggaggcaacgtg
gccttctctactttggaaggacgaccatctgcttataactttgacgagagcaaggaactc
caggatttcgtaactgccactgacatcaggatcactttggatcgtttaaacacctttggt
gatgaagtctttggtgatcccaaagtgctcaagtcttacttttacgccatttctgatttt
gctgttggtggcagatgcaagtgtaacggccacgcctccgagtgcgtgtcgagttcgtcg
gaagatggcagctactcgaacttggtgtgccgttgcgagcacagcacggccggtcgagac
tgccaagaatgcctcccgttttataatgaccgtccgtgggcccgcgccaccgccgacgat
gccaatgaatgccttccttgcaactgtaacggattctccagccggtgttacttcgatcag
gccttgttcgacgctaccggtcacggcggccattgcctcgattgcacggccaaccgcgac
ggacccaactgtgaacgctgccgcgaacagttttaccagcgcgaagataattactgtgta
ccctgcaattgtgacgagacaggttcacggagcttgcagtgtaaccgcgaaggcaaatgc
tcgtgcaagccaggcgtgactggtgacaaatgtgaccgatgcgaagagaatttctacgat
ttcggaccgcaagggtgccgcccttgcggctgcaatgtggccggcagtctgggtgggcaa
ccgcgctgcgactcggaaacgggcagttgctcgtgcaaagatcacgtcgaaggccagcgc
tgtgaccgcgccaagcccggctacttcaatttggacgctgaaaatctcttcggcgccact
ccgtgtttctgctacggtcattcttccgtctgcaggtcggccaccggctacgcccgtgga
ttaatcgagagcgtgttcgcccgttctgatgagaaatggtcggccctggaacaacctgga
aatcggccaatcacgctggcctataattcactgttgggaaacattggagtcagtgcgccc
ggccgtgacgccgtcgtcttctcagcccccgaacgttacttgaacgaccagcgaacgagt
tacaaccagcagttacatttcacgctgcgaaccaacgaagctggagcccgcgcttccatc
gatgacgtcgtattggaaggatccggactgaccatctcgcagcccatcttcggccaaggc
aaccaactgccatcggcatcgaaccaagtctattcgttcagactgcacgaacatcccgat
tacggctggaatccgcgtctgtcttcccgcgatttcatcagcgttttggccaacttgact
gccatccgaatccgtggcacctacacgccccgcggtgcgggttacctggatgatgtcaaa
ctggagacggcccgtcgaggcggcagcggttcacctgccaactggattgaacgctgcaat
tgccctgaaggttacgtcggccaattttgcgaatcctgcgctccgggattccgtcacgaa
cccgccaacggcggtccgtttgcccgctgcgtcccttgcaattgcaacggacacgccgat
atttgcgacgccgaaagcggccgctgcatttgccagcacaacacggcaggcgacaactgc
gagcgatgcgcccggggattttacggcaacgctcttcaaggaacgcccaacgattgcaat
ccttgcccgtgtcccaacggtggcgcttgtatcgaactggccgacgaaactgtcgtttgc
ctcgaatgtccggtcggttacgccggcccgagatgcgaattgtgcagcgatggctatttc
ggtgatcccgagggccgtttcggtacccgacgaccttgccagccttgcgattgcaacgga
aacgtcgatcccaacgctgtgggcaattgcaaccgaacgacgggcgaatgtctcaagtgt
atctacaacactgccggataccgttgcgactcctgcctggccggattctttggtgacgct
ctggcccttaataaaggcgattgccggccttgtcagtgcttccgccgcggaactctgcag
cttccttccggtaccctgcaatgtgatcaggtcagcggacagtgtgaatgcaaaccgaac
gtgatgggcaacaactgtgaccgctgcctggacggattcttcgacttggagagcggaaac
ggatgtcaaacttgcaactgcgatcctgtcggcgcactcaacaggacctgtaacgttcga
aatgggcaatgcttctgccggcctggcgtagtcggtctacgatgcgattcttgtgctccc
aaccaattcggattctcttacgatggatgcaaaccttgcgaatgcgacaccatcggatcc
ctgtcgcttcagtgtgacgatcctgatggacagtgtcgatgccgagacaacgtcgaaggc
cgtcgctgcgaccgctgtaaagaaaacaagcacgaccgtgaagctggatgtaaggattgc
ccgccttgttacaatttggtacaggaggccgtcgatcagcaccgagccaagatggccgat
ctggcaacgattttgcaacgcatcatctccaacccgaccatcatcgcggatcttgatttt
gataggaaactggccgaagtccaggaccgtgtcgatcaactctgggtagacgccaagatg
cagagtggcggtgacaaaagcataagcatccagctggaagagttgaagaatagattaaag
caagttcaacaaatgactggagaaattgaaatgcggacgcagagttcaagacgcgccact
gcagccggagttggcaatttaaccgtggctgaagccgcagtggaacgggccagagaatcc
cttaaatctgcccaacgttatttggagacagaaggatcggatgctctacaacgggcgatc
cagcgctcggagaaatttggccagcagagcgagcgcatgtcgcaaattgctcgcgatgcc
cgccaagcggccgaccaacttgacgactctgcggcgctgattgaatccacagcgcaggaa
gccctcaacacatccagcagtgcttaccagttggctcgagaagctgtcgatcagcagaag
aacagtaccgaagaaatcggtggactccgcaaagagttgaccattaccgaacagaccctt
gcccgcactcaggctatggccaaggaggcgctcactaatgcccaatcggcttacaccgaa
gctcttagtcttctgggtgacgcctacagtctagtggttcccaatgttgagtggcaattt
atgaaacgccaagctgcccagcattcggaagaatcacgtcaaatcaagacagaagccgat
cagctggcggcggaaaacgccaacatgttggatgaagttagtgaccaaatcattggcgct
ggtgatgtgctggccaaaggagtggcgcagcagcaaatcgcggatgaattgcttgctgac
gccgatgtcgccttgggaaggtctcaagaagccgtctcactgggcgaaaaaacacttgcc
gaggcccaaaagacgcttgaaacactcgaaggtttcgactcgctggtgcaggaaagtaaa
gaaaaagctcgcgatgctcttggtcaagccgtcgaaatcacaaatttgattgagcaagct
gaagaaagaacgcgagaagcgcaaaatgccctggccggtgccgagtccgatgcccgagtg
gctcgtgattctgcgaaacaggctcaagaacacgcggaacaagcctcaaaggacgctgta
atgattcgccaaggcgcttcagagacgagagataaagccggtcaattgaaagatacggcc
gaaagtctcactgctagtgtagccgatacggctaaccgaatgagaactttggaagctgaa
gctgctgaagatcaaggactcgctaaagaggctttggagaaggctaatcaagccaagagc
atttcagcggattcgactgttaaagtccgtgaagccatcagctcagtgaatgagattctc
atatctctcaataacatgggaaatattgatactgccgctttggatgaactggagcgaaaa
ttaatcattgccgaacgggactttatcgagtctgatatcgaacggcgcattgaagagatg
aggacggctcgagtcactcagaaccaatgggtaagagattacgaagaagaattggcccgt
cttcgactagaggtcgataacgtcgaggctatcaaggaggctctacctgagggttgttgg
aagaggctgaagttggaaccttaa
DBGET
integrated database retrieval system
