Daphnia pulicaria: 124329346
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Entry
124329346 CDS
T08670
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase synoviolin B-like
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
dpz
Daphnia pulicaria
Pathway
dpz04120
Ubiquitin mediated proteolysis
dpz04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
dpz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
124329346
04120 Ubiquitin mediated proteolysis
124329346
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dpz04121
]
124329346
Enzymes [BR:
dpz01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
124329346
Ubiquitin system [BR:
dpz04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
124329346
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF2039
zf-RING_2
zf-C3HC4
zf-rbx1
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4_3
zf-RING_16
zf-RING_11
Zn_ribbon_6
zf-RING_5
zf-RING_Vps41
Cript
Motif
Other DBs
NCBI-GeneID:
124329346
NCBI-ProteinID:
XP_046644350
LinkDB
All DBs
Position
3:7338572..7343999
Genome browser
AA seq
784 aa
AA seq
DB search
MSSQRGNVSRTRKQKHTNTISFKNNKHGETPKTKALNGLQICNVCSHCKNVLEWKIKYNK
YKILSAPAKCTKCLEKTVKQAYSILCQPCAEKLELCAKCGKKEEIVCRPEPTVAEKAQME
AKFQMELKSLSERKRRTFMRYLDRLGKVKHEDDDGETTSGETKTKPKSNSWMEEAEKRLE
LLKLRVEKEGKDEDDDDDWDGLGSSDEDFDSEKXSKMRIELVILGSLVLSTSVVGNAYYQ
KKQFYPSVVHITKSNPSMMVMYIQALVIVVLLGKLMKKVFFGQLRAAEVEHLIDRSWYAI
TETCLAFTVFREDFSTKFVALFTVLLFLKAFHWLVEDRVDYMERSPIISWLFHFRVTSLL
LVLGVLDWHFIQVAYYATLTQGASVQLVFGFEYAILLTMVAMVTVKYALHTYDINRENPW
EDKAVFLLYAELAIGFIKVILYMMFMLIMIRVYTLPLFAVRPMYLAMRSFKKALSDVILS
RRAIRNLNTLYPDATTEDLANTDTVCIICREEMVTGAKKLPCNHIFHATCLRSWFQRQQT
CPTCRLEVLRAPGNPVGNPAPPPAAANMRPPQPQAAPPPPQAAANMPPAAPVQPPLQPFI
PPHHPFTFPFPLPNIAQQAAANDVRYAPDANGQRPAMPPPFSLPPFMPFVVPPPRPPANL
GALSDAELRAMEGQERRHLEARIRVLRDIQVLLDAAVLQMNQYGILVSRLEHEANNNTET
LRSAGEEASATSAPQTNEQEPIINVTPPETENEVLTPEEETNLSDQERLRRRRVQRFMNA
GEQN
NT seq
2355 nt
NT seq
+upstream
nt +downstream
nt
atgagttctcaacgaggtaatgtgtctagaacaagaaagcaaaagcatactaacacaata
agcttcaagaacaataagcatggcgaaacaccgaagacgaaagcattaaatggtttacag
atttgcaatgtttgttctcattgcaagaatgtgttggaatggaagataaaatacaacaaa
tataagatactgagtgctcctgcaaaatgcacaaaatgtctagagaagacagtgaagcag
gcctactcgattctttgtcaaccatgtgctgaaaaattggagttatgtgctaaatgtgga
aaaaaagaagaaattgtttgtcgaccagaaccaactgtagctgaaaaagcacagatggag
gcaaaattccaaatggaattgaaatccttatctgaaaggaagcgccggacattcatgaga
tatctagatcgacttgggaaagtgaagcatgaagatgatgatggtgaaacaacatcaggg
gaaacaaaaacaaaaccaaaatcaaatagctggatggaagaggctgaaaagcgacttgag
cttttgaagcttcgagtagaaaaagagggcaaagatgaagatgacgatgatgattgggat
ggtttaggtagttcagatgaagactttgatagtgaaaagtaatcgaaaatgcgtatcgaa
ttagttattctgggcagtcttgttttgtctacgtcagtcgtgggaaatgcgtattaccaa
aagaagcaattttatccttcagtggttcatataactaaatccaatcctagcatgatggtg
atgtacattcaagccctagtcattgtggttttgctgggaaagttgatgaaaaaagtgttt
tttggccaattgcgagctgcagaagttgagcatcttattgatcgatcatggtatgcaatc
acagaaacatgtttagcttttactgtgtttagggaagacttttcaaccaagtttgttgcc
ctcttcacggttctactcttcctcaaagctttccattggcttgttgaagacagagttgat
tatatggagcgaagccccataatatcttggttgttccattttagagtgacatcattactt
ttggtcttgggggttctggactggcattttatccaagttgcatattatgctactttgact
caaggagcttcagttcaactggtatttggttttgagtatgccattctgttgaccatggta
gcaatggttacagtaaaatatgctctccacacttatgacatcaatcgtgaaaatccttgg
gaagataaagcagtctttttgctgtatgctgaacttgccattggttttatcaaagtcatt
ctatacatgatgttcatgttgattatgattcgcgtatatactctacccttgtttgctgtc
cgaccgatgtacctagcgatgaggtcattcaaaaaagcgttaagtgacgtaatcctttct
cggcgagccattcgcaatctgaatacattgtatcccgacgccacaacagaggatttggct
aacaccgatactgtctgcattatttgcagagaagaaatggttactggagctaaaaaattg
ccttgcaaccacatcttccatgctacttgccttcgatcctggttccagagacaacaaact
tgtccaacttgccgacttgaagttctgcgtgcaccgggcaatccagttgggaacccggca
cctccacctgccgctgctaatatgcgaccacctcaaccacaagctgcgccaccacctcct
caggctgcagcaaatatgcccccggcagctcctgttcagccaccgctacagcctttcatc
ccccctcatcatccttttacttttccttttcccctgccgaatatcgcccaacaagctgca
gcaaacgacgttcgatacgcaccggacgcaaatggccaaaggccagctatgcctccgcca
ttttccctcccacctttcatgccatttgttgttccacctccgagaccgcctgctaatctt
ggtgcactcagtgacgctgagttgcgagcaatggaagggcaggaaagacgacaccttgaa
gccagaattcgtgttctgagagatattcaagtattgcttgatgcagcagtcttgcagatg
aatcaatacggaattctagtgtctcgcttagaacatgaggctaataataatactgagact
ctaaggagcgcaggcgaagaggcttcagcgacgtctgctccacagacgaatgagcaagag
cccattatcaacgttactcctccagaaacggaaaatgaagttttgactcctgaagaagag
acaaatttgagtgatcaagagagattaagacgccgacgtgtacagagattcatgaatgct
ggggagcaaaattga
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