Daphnia pulicaria: 124329360
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Entry
124329360 CDS
T08670
Name
(RefSeq) vacuolar protein sorting-associated protein 54-like
KO
K17600
vacuolar protein sorting-associated protein 54
Organism
dpz
Daphnia pulicaria
Brite
KEGG Orthology (KO) [BR:
dpz00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
dpz01009
]
124329360
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dpz04131
]
124329360
Protein phosphatases and associated proteins [BR:
dpz01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
124329360
Membrane trafficking [BR:
dpz04131
]
Endosome - Golgi transport
Tethering complex
GARP complex
124329360
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Vps54
Vps54_N
RRF_GI
RapZ-like_N
Acyl-CoA_dh_1
Motif
Other DBs
NCBI-GeneID:
124329360
NCBI-ProteinID:
XP_046644369
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All DBs
Position
3:complement(7554063..7559732)
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AA seq
934 aa
AA seq
DB search
MAVSKTNTDSISLLSSGSNSPTWRSCSYCLNKIFKTSAEFTRHLRDDHCSQEGGSFVCRY
GYNGVCTSLPVEGVSDRDYEDHVMKHHAKTQDGKDAGILCGMTPSPLQGHLYRLSLLSDG
PAWNVNAACQNMAAILNDPKKGKQKDFFTRTWGDGFVENTTIPESLLLPIVDEAYFTPYL
KKISKRYKKSSKKSSVTLATEQITTRSTLKPIDGNEGDFSVIPQTFLQPTFNLSQPDTFH
KVFPFIKESGLSHVLGTGKTLQEKLSYYLDLIEMQIAHQISHKSEDFFQAVASHDAVREE
LGKALTAVKALRLKVNHVDATHVQGSLKVLQRQVARQNYAIVYRKLKLMATVHQTQPTIQ
LLLSTSDFVGALDLIGTTQEVVQQELMSIHCFRYLSSQLKEMENLIENLLSNEFERLTTA
ELNRPLKEDVLVTEEDRLTAVLYGMLRQRRYNFIELFKDEGLTAMKALMKQTIVEALAAN
DTDVERGSMLYEQLKHLNFVSWTNLMQRCMTSLKALLNRIRAIHDIMALVLATETSRQEE
VVVTEDDRQRLQQSLKEMIQSLCDSAHDQCGRLLSSRTKDGALLERVSSQEFVALAKLIE
TFVLDCQNISGHKSMGLRLAFQGQATRFVQKFHEERRSKLGAVLDSERWRQAEITPDIQA
NVDNFFGSPSDATAAPFKSHPVSEKIIVRGESYVVVGAALFFLPQLLEYCNCVDNLPTAA
PDLLTRLVELLKTFNSRTCQLVLGAGALPLVGLKTISSRNLALASRSLQLIALFIPLLKA
HFEERLAPKQKTMIKHFDQALKDFTDHIAEIENKLLTLLSEMAESYLSSWEIKPPVPSVA
FRAISKQMAKLHEAINPIWPSNDVQNFYSKFNASLKKSLQHHISKHGVQNNGGPQHGLVT
SELIFYVSSLKSLNVLRDDETVEVFSKDLWNVPR
NT seq
2805 nt
NT seq
+upstream
nt +downstream
nt
atggccgtttcaaaaacaaacaccgactctataagcttattatcgagtgggagtaattca
ccgacatggagaagttgtagttattgtcttaacaaaatattcaaaacatcagcagaattt
acaagacacttgagagatgatcattgcagtcaggaaggtggttcatttgtttgtcggtat
ggctataatggagtatgtacatcattaccagttgaaggggtgagcgatagagactatgaa
gaccatgttatgaaacaccatgctaaaacacaggatggaaaagatgcaggcattttgtgt
gggatgacaccttctccgcttcaagggcatctctatagattaagcttgctgtcagatggg
ccagcttggaatgtcaatgcagcttgccaaaacatggcagcaattttaaatgatccaaaa
aaagggaaacagaaggatttctttactagaacatggggcgatggatttgtagaaaacact
actattcctgaaagtctcctactacccattgttgatgaagcttatttcacaccatacctt
aagaaaatttccaaaagatacaaaaagtcttcgaaaaagtccagtgtaacattagcaact
gaacaaattacaacaagatcaacactgaaacccattgatggaaatgagggtgactttagt
gttattccacaaactttcttgcagcctacatttaacctaagccaaccagatacctttcac
aaagttttccccttcatcaaagagtcaggattatcgcacgttttgggaacggggaaaaca
ctccaagaaaaactgagctattatttggacttgatagagatgcaaatagctcatcaaatt
tctcataaatcggaagacttcttccaggctgttgcttcgcatgatgccgtacgggaggaa
ttaggcaaagcgctgacggcagttaaagccttaagactcaaagtcaatcatgttgatgct
acgcatgttcaggggtcgttgaaagtattacaacggcaagttgctcggcagaattatgca
attgtttatcgtaaactaaaactaatggcgactgtgcatcaaacccagccgactatacag
cttctcctctctacttctgatttcgtcggtgcgttggatcttattgggaccacacaagag
gtcgtacaacaagaactgatgagcattcactgtttccgttatctgagctcacagttgaaa
gaaatggagaatcttatcgaaaatttgctttcaaacgagtttgaacgcctcactaccgcc
gaacttaatcgacccctcaaagaagatgtattagttacagaagaagatagattgactgct
gttctctacggcatgttacgacagaggcgttataacttcattgaattatttaaagatgaa
ggattgaccgccatgaaagccttgatgaaacaaactattgtagaagctcttgcagccaac
gacaccgatgttgaaagaggttctatgctctacgagcagctcaagcatttaaactttgtg
tcatggaccaatttgatgcagcgatgtatgacaagtttgaaagctctgctcaaccgcatt
cgtgccattcatgacatcatggcccttgtacttgccacggaaacaagccgtcaagaagag
gttgtggtaactgaagatgatagacagagactacagcagtcattaaaagaaatgatacag
tcactttgtgattctgcacatgatcagtgcggacgtcttttatcatcgcgtaccaaagat
ggggctttattagaaagggtttcttcccaggaatttgtggctctggcaaagctgatagag
acttttgtgttggattgtcaaaatataagtggacacaaatccatgggtttgagattagca
tttcagggtcaagctacgcgtttcgttcaaaaattccacgaagaacgtcgttctaaattg
ggtgctgtcttggacagtgaacgctggaggcaggcggaaataacaccggatatccaagca
aatgttgacaactttttcggttcacctagtgatgctactgccgccccattcaaaagccac
cctgtttcagaaaagattatagtaagaggcgagtcgtacgtggtggtgggtgcagcctta
ttcttccttcctcaattgttggagtactgcaattgcgtggacaatcttccgacagctgcg
ccagatttgctcactcgtttggtggagttattaaaaacctttaattcccgcacttgtcaa
ttagtgctaggagctggtgctcttcctttagttggtctgaagactatttcaagtcgtaat
ttagcacttgcgtcacgcagtctgcagctgattgctttattcattccattactcaaggcc
cactttgaagagagacttgcacctaagcagaagacaatgatcaaacattttgatcaagct
cttaaggacttcaccgatcacatagcggaaattgaaaataaacttctcactctcttaagt
gaaatggctgaaagttacctttcttcttgggaaattaagcctcctgtcccttccgttgcc
tttcgagcgatcagcaaacaaatggcgaaacttcacgaagctatcaatcccatctggccc
agcaacgatgtccaaaatttttatagtaaatttaatgcctcccttaaaaaatcattgcaa
catcatatctccaagcatggtgttcaaaataacggaggcccacagcatggactggtgacg
tctgagctgatattttacgtttcgagtctcaaatctctgaatgtcttacgcgatgatgag
acagtggaagtattttcaaaagatttatggaacgttccgcgatga
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