Daphnia pulicaria: 124329381
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Entry
124329381 CDS
T08670
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit-like
KO
K07466
replication factor A1
Organism
dpz
Daphnia pulicaria
Pathway
dpz03030
DNA replication
dpz03420
Nucleotide excision repair
dpz03430
Mismatch repair
dpz03440
Homologous recombination
dpz03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
dpz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
124329381
03420 Nucleotide excision repair
124329381
03430 Mismatch repair
124329381
03440 Homologous recombination
124329381
03460 Fanconi anemia pathway
124329381
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dpz03000
]
124329381
03032 DNA replication proteins [BR:
dpz03032
]
124329381
03400 DNA repair and recombination proteins [BR:
dpz03400
]
124329381
Transcription factors [BR:
dpz03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
124329381
DNA replication proteins [BR:
dpz03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
124329381
DNA repair and recombination proteins [BR:
dpz03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
124329381
MMR (mismatch excision repair)
124329381
DSBR (double strand breaks repair)
HR (homologous recombination)
124329381
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
CDC24_OB3
OB_MEIOB_N
IBR
Motif
Other DBs
NCBI-GeneID:
124329381
NCBI-ProteinID:
XP_046644403
LinkDB
All DBs
Position
3:complement(7599031..7602012)
Genome browser
AA seq
611 aa
AA seq
DB search
MNRRNHPALTSGAIPSIIGNGLHNETPILQVLGYKNLQGDNNDRYRILISDGKYSYAYGM
LATQLNHLIVDGQLENFTIIRVKKFVVNKVATKATAGKDQKKIIILLDVEPIVPGSEVGE
KIGNPQTLNDVGEVTEEAAAKPAPLGNVNNYNMGSKSAPPNNTGGYGQPTEKSDIITHPI
VSLTPYQNKWTVKVRIINKSDIRTWSNSRGEGKLFSIDMMDETGEIRATAFNAECDKFYH
MIEIGKIFYISQAQLKAANKQYSSMRNDYEMSFNQNTTVIPCHDDTSDIPSITFNFVPID
QLPSLDKDSVIDVIGVVKSANDVRVIVSKTTNKELRMREVQMVDSTNTVVNLTLWGKMGE
EFDASSQPVVALKGVKLSDFGGRSLGTVSSTVVQINPDMNEAHKLRGWYDNGGSSSVVSS
ISASRGTGSGGSGGSYKTFAEAKFENLGSKDKPEYYSVKAMVAMINKERALYMACPSDEC
NKKVIDQNNGLYRCEKCQREFQEFKWRMMLSVNIADATDQQWVTCFQETAETLLGKSADE
VGRLKDSDNNEFQKIFEEATFKWYIFRLRVKMETYNDESRLKTNVYEVKEINYKEHNERL
IREMKEMAASE
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atgaacagaagaaatcacccagcactaaccagcggcgcaattccttccatcattgggaat
ggcctgcacaatgaaactccaattctacaagttttgggttacaaaaatcttcagggagat
aataatgaccgttacagaattctcatctctgatggaaagtattcctatgcatatggaatg
ttggcaacacaactaaatcatctgattgtggatggtcagcttgagaactttaccatcatc
agagtaaaaaagtttgttgttaacaaagttgctacaaaggcaactgcaggcaaggaccaa
aagaaaattatcattcttttggatgttgagccgattgtgcctggaagcgaagttggagaa
aaaataggaaaccctcagactcttaatgatgttggagaagttactgaagaggcagcagca
aagcctgcacctttaggaaatgtaaacaattacaatatgggatcaaagtctgcaccacct
aacaacactggtggatatggacagccaacagagaagtctgacattattacccatcccatt
gtaagccttacaccctaccaaaacaagtggaccgtaaaagtgagaattattaataagtcc
gatatccgtacgtggagcaattctcgaggtgaaggaaagcttttctcgattgacatgatg
gatgagactggtgaaatccgtgccactgcattcaatgccgagtgtgacaagttttaccac
atgattgagatcggcaagatcttttacatttcacaagcacaactgaaggcagcaaacaaa
cagtacagcagtatgaggaacgattatgaaatgtctttcaaccaaaatactacagtaatt
ccttgccacgatgatacatcagatatcccatcaatcaccttcaactttgttcccattgat
cagctacctagcctggacaaggacagtgttattgatgtcattggtgtggttaagtcagca
aatgacgtccgcgttatcgtttccaaaacgacaaataaagaattgaggatgcgagaagtt
cagatggtggacagtaccaacacagtggttaatttgactttatggggaaaaatgggggag
gaatttgacgccagctcccagcctgttgtagcattaaaaggagtcaaactttctgatttt
ggaggtcgttctctaggaacagtctcgtctaccgtcgtgcagattaatcctgacatgaat
gaagctcacaaactaagagggtggtacgataacggtggctcatcatcggtcgtttctagc
atttcggcgagtcgtggcactggcagtggtggtagtggtgggtcgtataagactttcgct
gaagcaaaattcgaaaacctgggaagtaaagataaaccagaatactacagtgtaaaggct
atggttgctatgatcaacaaagaaagagcgttgtacatggcttgtcccagtgatgaatgc
aacaaaaaggtcatcgatcaaaacaatggcctctatcgatgtgagaaatgccagcgcgaa
ttccaggaattcaaatggcgcatgatgctttcggtcaatatcgcggatgccacggaccag
caatgggtaacctgcttccaagaaaccgctgaaactcttcttgggaaatccgcagacgag
gtcggtagattgaaggattcggataataacgagtttcagaaaattttcgaagaagctact
tttaagtggtatatcttccgcctgagagtgaaaatggagacgtacaatgatgaaagccgc
ctcaaaacaaatgtctatgaagtgaaggaaatcaactataaagagcacaacgagcgattg
atccgagaaatgaaagaaatggctgcatcagaatga
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