Daphnia pulicaria: 124329492
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Entry
124329492 CDS
T08670
Name
(RefSeq) E3 ubiquitin-protein ligase AMFR-like
KO
K10636
E3 ubiquitin-protein ligase AMFR [EC:
2.3.2.36
]
Organism
dpz
Daphnia pulicaria
Pathway
dpz04137
Mitophagy - animal
dpz04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
dpz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
124329492
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
124329492
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dpz04121
]
124329492
Enzymes [BR:
dpz01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.36 RING-type E3 ubiquitin transferase (cysteine targeting)
124329492
Ubiquitin system [BR:
dpz04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
124329492
Multi subunit type E3
ERAD complex
124329492
LMBR1L-GP78-UBAC2 complex
124329492
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_SYVN1_N
zf-RING_2
CUE
zf-C3HC4_2
zf-C3HC4
zf-C3HC4_3
zf-rbx1
zf-RING_11
G2BR
zf-RING_UBOX
zf-ANAPC11
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
124329492
NCBI-ProteinID:
XP_046644514
LinkDB
All DBs
Position
3:complement(7687839..7690649)
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AA seq
557 aa
AA seq
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MPVLLLERLPLPSLEAYAVVSVSLLGLSLHYAAEKTQNPEWRMQFVKTNSSQEIPNSLQA
FISNILSRYWLSSRAQDIVSFSIHDSLCIWIVVNMAYCLLVLFGNWLQKQVFGELRVSEL
QHIKDKFWNFVFYKFIFIFGIKNVQSMEGVILWGSWFSVIGFLHIHAQLCQDRFEYLSMT
PCTPRNRHIRLLTLLGSILVASGLLFLICLGVGQRAGWITFALVAPECLLLALRTTHVIF
RYILYLQSCHPPIHQISQGWSPSSYYVELAVEISCLVVDLAHHIHMLLRANMLLSMASLV
IFMQLRVLYEQLCGRLRRHGNYKRLLKLVELCCPLETLHFELESEWEDNKCAICWEAAAV
ARRLPCGHHFHHGCLLHWLEQDPTCPTCRRQLLEDGSKETTSSSRPRETASFISWTGWNR
LFQQNTDTPVVAAAENSQLEALADQVLQLFPDYSFSVIVEDLRQTRSVDLTVENILEGRL
LPTLPSFQQEPSLSTLPTFVRQENQFDVSQEPEKLFVDDPQERQHILQCRKHELIAEARN
RFLQRQALENNSTIIES
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtcttactacttgagaggttacccctcccgagtttggaagcttacgcggtagtc
agtgtttctcttttgggtttgtctcttcactacgctgcagaaaaaacacagaaccctgaa
tggaggatgcaatttgttaaaacgaatagcagccaagagattcccaactccttgcaagca
tttatttcaaatatcctgtcacgttactggctcagctccagagctcaagatattgtgtca
ttttctatccatgacagtctctgcatttggattgttgtgaacatggcttactgcctcctt
gtattatttggaaattggctgcagaagcaggtgtttggggaactaagagtttctgaactg
cagcacatcaaagacaagttttggaattttgtgttttacaaatttatttttatatttggc
attaaaaatgttcaaagtatggaaggtgttatattatgggggtcctggttttctgttatt
ggctttctacacattcatgctcaactttgccaagacagatttgaatatttatctatgact
ccatgtacccctcgaaatcgacacatccgcttgcttaccctgctgggatcgattctggtg
gcatcgggattattatttttgatttgcctcggcgttggacaacgcgctggatggattaca
tttgccttggtcgccccggaatgtcttctcttggctttacgtaccacccacgttatcttt
agatacatcctctacctgcagtcttgtcatccgcccattcatcagatctctcaagggtgg
agtccttcgtcgtactacgtggaattggcggtggagatttcatgcctcgttgtggatttg
gcacatcatattcacatgcttctgcgagcgaatatgctgctctctatggcatctttggtc
attttcatgcaactgcgagtgctctacgaacagctgtgtggacgtctccggcgacacggg
aactacaaacggttgctgaaattggttgaattgtgctgtcccttggaaacactccatttc
gaactcgaatctgaatgggaggataacaaatgtgccatttgctgggaagcagcagctgta
gccagacggttgccgtgtggtcatcattttcatcatggttgcctgttgcactggttggaa
caggatcctacgtgccctacgtgtcgacgccaacttttagaagatggatcgaaagaaact
acttcgtcttcacgtccccgggaaactgcaagttttatatcgtggacgggctggaatcga
ctgtttcaacaaaacactgatactccggtagtagcagctgcagaaaactctcaattggaa
gctttagctgatcaggtacttcaattgtttcccgattattcgttttctgttatcgttgag
gatctacggcaaactcgctcagtagacttaacagttgagaatatattagagggtcgtctt
ctgcccacacttcccagctttcaacaagagcctagtctttctacgttgccaacattcgtc
aggcaagaaaaccaatttgatgtttcccaggaaccagagaagctctttgttgatgatccg
caagaaagacaacacattcttcaatgtcgtaagcatgaattaatcgcggaagctcgaaat
cgctttcttcagagacaagcactcgaaaacaattccactatcattgaaagttga
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