Daphnia pulicaria: 124329537
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Entry
124329537 CDS
T08670
Name
(RefSeq) structure-specific endonuclease subunit slx1-like
KO
K15078
structure-specific endonuclease subunit SLX1 [EC:3.6.1.-]
Organism
dpz
Daphnia pulicaria
Pathway
dpz03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
dpz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
124329537
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dpz03400
]
124329537
DNA repair and recombination proteins [BR:
dpz03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
124329537
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SLX1_C
GIY-YIG
T5orf172
zf-HC5HC2H
FANCL_C
zf-HC5HC2H_2
PSCyt3
zf-RING-like
PHD_NSD
Motif
Other DBs
NCBI-GeneID:
124329537
NCBI-ProteinID:
XP_046644581
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Position
3:complement(7591149..7592465)
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AA seq
260 aa
AA seq
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MSSTVIENFYGVYLLFCENPKYLGRTYIGYTVNPNRRIQQHNKGVRSGGAYKTSNKGPWE
MCLIVHGFPNDISGLRFEWAWQHPEKSRRLRKLIERKRAKENSFQHKIRILSHMLRIGPW
NRLALTIQWLVPKYRVEFETSLLPPPHMPIEEGRVISKKVPSPSKEKVSTKSSSSSAKCD
ICHQIMDNDDVLNCINNDCTLKTHILCLASHFLKSEPDHMLPLEGSCPSCHSELLWADLI
RKFKGCYQNQNLALDETILT
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atgagcagtactgtaatagaaaatttttacggtgtttatctacttttctgtgagaatccg
aagtatttgggacgtacttacattggatacactgtaaacccgaaccgtagaatacaacaa
cacaacaaaggagtacgctctggaggtgcatacaaaacatctaataaagggccatgggaa
atgtgcttgatagttcatggtttcccaaatgacatttcaggactcagatttgagtgggcc
tggcaacacccagaaaagtctcgcagattgagaaagctgattgaaaggaaaagagccaaa
gaaaacagttttcaacacaaaattcgtattctatctcatatgttgcgaataggaccgtgg
aacagactcgccttaactatccaatggctcgtgccaaaatatcgagtcgagttcgagacc
agtttgctgccacctcctcatatgcccatagaagaaggacgtgtgatttcaaaaaaagtt
ccatcaccttcgaaagaaaaggtttcgactaaatcatcctcatcctcagcaaagtgcgat
atttgccatcagataatggataatgacgacgttttgaattgtattaataatgactgcacc
ttaaaaacacatattttgtgtcttgcttcacattttttgaaatctgaaccagatcacatg
ctgccattggagggatcatgtccaagttgccatagtgaattattatgggccgatttaatt
cgcaaattcaagggttgttatcaaaaccaaaatcttgctcttgatgaaactattttaaca
taa
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