Daphnia pulicaria: 124335774
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Entry
124335774 CDS
T08670
Name
(RefSeq) protein slit-like
KO
K06839
slit 2
Organism
dpz
Daphnia pulicaria
Brite
KEGG Orthology (KO) [BR:
dpz00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
dpz00536
]
124335774
Glycosaminoglycan binding proteins [BR:
dpz00536
]
Heparan sulfate / Heparin
Axon guidance molecules
124335774
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
EGF
Laminin_G_1
Laminin_G_2
LRRNT
hEGF
LRR_9
EGF_TEN
LRRCT
EGF_DL_JAG
LRR_LRWD1
EGF_MSP1_1
EGF_2
LRR_6
Motif
Other DBs
NCBI-GeneID:
124335774
NCBI-ProteinID:
XP_046645188
LinkDB
All DBs
Position
4:20527816..20596207
Genome browser
AA seq
1525 aa
AA seq
DB search
MAVHQHQQARSSSSSSSAATAAAAVTATATNTWWSSTSSIWYSERSLWWQSVLLTDKMRA
FLFLWIFVLLLLHVAGGGQRDEPARSAGKGAGSDAAALPCSRLCQCEANAVDCSNRGLTQ
VPLDLPKDADKINLEGNNLTSLLSSDFEGFANLRILRLSNNQLQYIPDLVFATLGHLQRL
DLSHNQLTAVGKRTLRGLNSLRNLQLDNNQLTCIDEAALRSQKELEILTLNNNNLTSLPR
DLFEPLSRLRVLRLSENKWLCDCHLAWLGRFLRRHARAGSPLAANGYLPRCHAPFGLRIK
AVSELLDTEFKCTGAAERPSEECSAQPGCPLMCRCADGVVDCRDKSLSRIPPYLPDSATE
LRLEQNQITEIPAKAFAAYKKLKRVDLSNNQISSIAGDAFHGLKSLTSLILYGNRITELP
AGMFHGLTSLQLLLLNANRISCVRRDSFKDLHNLNLLSLYDNNIPTMLNGTFDSLRNIQT
LHLGRNPFLCDCYLTWLADYLHRKPVETSGVRCESPRRMQRRRISVLRDEKSRCSDRDLE
RNLLEISPCEDDPSCPTECSCKGTIVDCSNKGLKEIPRELPLYTTELILNDNQIVRIKAD
GMFRDLPNLLKVDLRRNQISAIENGAFEGANTLVDLNLAENMIQEIHNKMFTGLVSLRTL
SLFQNKITCVTPGSFDYLRSLTSLNILSNPLHCNCHMAWFGDWLRKKEQELSTGAPRCAS
PARVKDIPLQDMPSFEFRCSELDDQGCLGEDYCPPKCTCTGTIVRCSRAKLREIPKNIPP
ETTELYLDVNEIQSIQSERLSHLRSLTRLDLSNNMVSVLSNNTFVNLTKLSSLIVSYNKL
QCVQRNAFSGLLSLRILSLHGNDVSMIPEGAFTDLQSITHLALGSNPFYCDCNLRWLAEW
VKRDYVEPGIARCAEPILLRDKLLLTSPADHFQCKGKISNEVLAKCDTCYTFPCKNGATC
RPTGERDYECLCAPGYHGKLCESAIDACYGNPCRNSAICKVLEEGRFSCHCSAGYEGDRC
ETNINDCLDHKCVNNATCVDQVESYRCDCQSGYTGIYCEKKIQFCTKDFNPCKNGATCVD
RGDHYACQCALGFSGENCTVNNDDCISHMCQNGGTCVDGINEYTCKCPPEFSGKFCEASP
MVSLLYPQTSPCQQHDCQNGICFQPQGLTDYICKCASGYTGKRCEFLTSVSFAQNGSYIE
MPSLKTKPEANITMIFSTEEENGILIYNGESQHIAVELFRGRIRVSYDVGNYPVSNMFSY
ETVSDGRYHTVELLSQKKNFTLRVDQGNARSMINEGEHEYLRLSTPLFIGGLPNEAAEKA
ARQWQLRNTTSFRGCIKELWINGKLTDYAQAATKQNRIIPGCANSESEETAAEMIKPKAN
NLKKDNAQREVKDSAAQPQSYMNTLKTSVLTSYDPCKDHRCRKGQCVSKKDGKNYSCKCQ
AGWGGKYCDTAPTCRKEQYRDYYMEHGCRSTKPVRNSVCSGNCGSDCCRPRRSKKRRLKL
ICNDGTRYTKEIEIVRKCGCSRKCL
NT seq
4578 nt
NT seq
+upstream
nt +downstream
nt
atggccgtgcaccagcaccagcaggctagatcatcctcgtcgtcgtcgtcagcagcaaca
gcagcagcagccgttacagcgacagcaacaaatacgtggtggtcttctacgtcttcgatt
tggtattctgagagatccttgtggtggcaaagcgtcttgctcacggacaaaatgcgagcc
tttctcttcctgtggattttcgtcctgctcctgctccatgtggccggcggcggacagcgc
gatgaaccggcccgctcggccggaaaaggggccggtagcgatgcggccgccttgccttgc
tcgagactctgccagtgcgaggccaatgcggtggattgctccaaccgcggactgactcaa
gtgccgctggatttgccaaaggacgccgacaagataaatttggaaggcaacaacttgacc
agtttgctgagttcagatttcgagggcttcgccaatctacgaatcctgcgtttgagcaac
aaccagctgcagtacatcccggacttggtcttcgccacgctgggccacctccaacgactg
gatttgagccacaaccagttgactgctgttggcaagcgcaccctccgaggactcaactcg
ctgcgcaatttgcaactggataacaaccaactgacatgtatcgacgaagcagctctccgc
tcccagaaggaattggagattttgactttgaacaacaacaacctgacgtcgcttccgcgc
gacctgttcgaaccgctgagtcgcctacgcgttttgcgcctctcggagaacaagtggctc
tgcgactgccatctcgcctggctgggccgcttccttcgccgccacgcccgggccggctca
ccgctggccgccaacggctacctgccccgctgtcacgcccctttcggcctccgcatcaaa
gccgtgtcggagcttcttgacacggaattcaaatgcacaggagccgccgaacggccatcg
gaggaatgttcggcccaacccggctgcccgctgatgtgccgctgcgccgatggcgtcgtg
gattgccgagataaatctctcagccgaatcccgccctatttgccggacagcgctactgaa
ctccgcttggaacagaatcagataaccgaaattcctgccaaagcgttcgcagcttacaag
aaactcaagagagtggacttgagcaacaaccagatcagctccatcgccggcgacgccttt
cacggattgaaatcgctaacatcgctgattttatacgggaaccggatcaccgaacttccg
gctggcatgttccacggtctgacgtcgttgcagctccttctactcaatgccaaccgtatc
tcctgcgtccggcgagactccttcaaagatcttcacaatctcaatctgctatcgctttac
gacaacaacatcccaacgatgctcaacggaacgttcgacagcttgcgcaacattcaaacg
ctgcatcttggacgtaacccgttcttgtgcgattgctacctgacgtggctggctgattac
ttgcaccgcaaaccggtcgaaacttccggagtccggtgcgaatctccgcgccggatgcag
aggcgtcgcatctctgtcctgcgagacgaaaaatcgcgctgcagtgatcgtgacttggag
cgcaatttgttggaaatcagcccgtgcgaagatgatccatcctgtccgactgagtgttcc
tgcaaaggaaccattgtcgattgttccaataaaggactaaaggaaattccgcgtgaactt
cctctttacaccaccgaactgattttgaacgacaatcaaatcgtgaggatcaaggcggat
ggcatgtttcgagatctgcccaatctccttaaagttgatttgaggcggaatcaaatctcc
gccattgagaacggagccttcgaaggggccaacacgctggttgacttaaacttggccgag
aatatgatccaggaaatccacaacaaaatgtttactggcctggtcagcttgcggactctg
tcgctgttccaaaataaaatcacgtgcgtcaccccggggtcgtttgattacttgagatct
ctcacttcgctgaatattttgagcaacccgctgcactgcaattgccacatggcctggttt
ggcgattggttgcggaaaaaagaacaagaactgagcactggagcgccccgctgcgccagc
ccggctcgtgtcaaggacattccattgcaggacatgccatcgttcgagtttcgctgctcc
gaattggatgatcagggatgccttggtgaggattactgcccgccaaagtgcacttgcacc
ggcaccattgttcgctgcagccgggccaagttgcgtgaaattcccaagaacattccgccg
gaaacaactgaactgtacttggacgtgaacgagatccagtccatccagtcggagagattg
agccatttacggtcgctgactaggctcgacctgagtaacaatatggtgtccgtcttgtcc
aacaatacttttgtcaacttgaccaaactttccagcttgatcgtcagctataacaaacta
cagtgcgtgcaaaggaacgccttctccggactgctctctcttcgcatactgtcgttgcac
ggaaacgacgtatccatgatccccgaaggcgctttcactgatctgcaatccatcacccac
ttggctcttggctcaaatccattctactgtgactgcaatcttcgctggctggccgagtgg
gtcaaacgagactacgtcgagccgggcatcgcccgttgcgccgaacccatcttgttgcga
gacaaacttcttctcacttcgcccgctgatcacttccagtgcaaaggaaaaatttccaac
gaggtattggccaagtgcgacacttgctacactttcccttgtaagaacggcgccacttgt
cggccgacgggcgagagggattacgagtgcctctgtgcccccggctatcacggaaagttg
tgcgaatccgccatcgacgcttgttacggcaatccgtgccgcaactctgccatatgcaaa
gttttggaagaaggtcgttttagttgccactgctcggccggctacgagggggatcgttgc
gagactaacatcaacgactgtctcgatcacaaatgtgttaataacgccacctgcgtcgat
caagtcgaatcttaccgctgcgattgtcagagcggatacacaggaatttactgcgaaaag
aagatccagttctgtaccaaagatttcaatccttgcaaaaacggagctacatgtgtggat
cgcggcgatcactatgcctgccagtgcgctcttggtttcagcggagaaaactgtaccgtt
aataacgacgactgcatcagccacatgtgtcagaacggtgggacctgtgttgacggtatc
aacgagtacacttgcaagtgtccgcctgaattttctggcaagttttgcgaggcctctccg
atggtcagtctgctataccctcaaacttccccttgtcaacagcacgattgccagaatggc
atttgcttccaacctcaaggattgaccgattacatttgcaaatgtgcttcgggctatact
ggaaagcgatgcgagtttctaacaagtgtaagcttcgcccaaaacggctcctacattgaa
atgccttcgctcaaaaccaaaccggaagccaacatcacgatgatcttttcaaccgaagaa
gagaacggaattttgatctacaacggcgaatcgcagcacatagccgtcgaattgttccgc
ggccgcattcgcgtcagctacgatgtcggcaactatcccgtgtccaacatgtttagctac
gaaacagtgtccgacggtcgataccacacagtggagttgctctcacagaagaagaacttt
actctacgtgttgatcagggcaacgctcgctccatgataaatgaaggagaacacgaatac
ttgcgtctaagcactcccttattcatcggaggcctaccaaacgaagcggctgagaaagcc
gctcgacagtggcaactgcgaaacactactagcttcaggggatgcataaaagaattatgg
atcaatggtaagctgacagattatgctcaggcagccacaaaacaaaatcgaatcatccct
ggctgtgctaactctgaatccgaagaaacggccgccgaaatgatcaagcctaaagcgaac
aatctaaagaaggacaatgcacagcgtgaagtgaaagacagtgccgcacagccccagagc
tatatgaacacgcttaagacttcagtgctgacttcctacgacccgtgcaaggatcatcga
tgccgcaagggtcagtgcgtgtccaagaaagacggcaagaattacagttgcaaatgtcaa
gctggatggggaggcaaatattgcgacaccgcccccacttgccggaaagaacaatatcgc
gactattacatggaacacggatgccgctccaccaagcctgtccggaattccgtttgcagc
ggtaattgcggttccgattgctgccgacctcgtcgctccaagaaacgtcgcctgaagctc
atctgtaacgacggaactcgctacaccaaggaaatcgagattgtccgcaaatgcggctgt
tctcgaaagtgtctctaa
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integrated database retrieval system