Daphnia pulicaria: 124335882
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Entry
124335882 CDS
T08670
Name
(RefSeq) UV-stimulated scaffold protein A-like
KO
K23720
UV-stimulated scaffold protein A
Organism
dpz
Daphnia pulicaria
Pathway
dpz03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
dpz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
124335882
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dpz03400
]
124335882
DNA repair and recombination proteins [BR:
dpz03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
124335882
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UVSSA_N
DUF2043
Motif
Other DBs
NCBI-GeneID:
124335882
NCBI-ProteinID:
XP_046645327
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Position
4:complement(22058062..22060439)
Genome browser
AA seq
560 aa
AA seq
DB search
MDLTDNSLVEKLTQAIESIVGCGLKQPDESKMKDIKKICRISDIYVKEAYQITMHQLNQK
HSEVRLACLLIFKELFQRSHYFRELLVADFQDFSKLVLDIDARYPLPPPPAALKQLKVTA
MKTIKEWYEVYGEAYKKLKIGYQYLKKSKAVDFEDMEARSAQERTRIQEKEERLLALKQI
KLKTLMEELASEEADLIDCITQIENGFELLFPDEFSLKEPSKCAGPSDSDTLDFRAHGIT
NNATFNLVIEVQTTQTIHVTEDNREIIKCVQDQYRLLTSRFLPAVFKWNITAAKLGADER
LQKKILDLKLKVELAIKKYQELNLSSCSTELDSSSESDLETVADLNNYENEVTEVISDNS
DELEDSTPRSIRSPAKKKKKVDNERRLPLDIDSYASSQSNIPVPTFSRNPVESYWVQDPE
SGLAATVDLVTHPVELGEAFCPVKWSCRAPLPSGKLCPRNDRKKCPLHGPIVARDELGQP
KDPSSVRSSKKPSIPDWQEPALLAEIKAATGVDLTIPTKGKRLKKTQFPNLTDVKALNNT
SRSRLEKKVLKRSTIKKISK
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atggatctaactgacaatagcttggttgaaaaattaacacaggcaattgagagcattgtt
ggctgtggactaaaacagcctgatgagtcaaagatgaaagatataaaaaagatttgtcga
atatcagacatttatgtcaaagaggcctaccaaattacaatgcaccaacttaatcagaaa
cattcagaagttcgattagcatgtttgcttattttcaaggaattatttcaaaggtcacat
tactttagagaactattagttgcagatttccaggacttctcaaagttagtgttggatata
gatgccaggtatcctctaccacctccaccagcagcattaaagcaactgaaagtaactgca
atgaaaacaatcaaagagtggtatgaagtgtatggagaagcttacaaaaagttaaaaatt
ggataccagtatttaaaaaaaagtaaagctgttgactttgaagatatggaagctagatca
gcacaagagagaacaagaattcaagaaaaagaagaacgattgttggcattgaagcaaatt
aaattaaaaacattaatggaagaattggccagtgaagaggctgacttgatagactgtatc
acacaaattgaaaatgggtttgaattgctcttccctgatgaattttctctcaaggaaccc
agcaaatgcgcaggtcccagcgattcggacactcttgatttcagggctcatggaataacc
aataatgctactttcaaccttgtaattgaagtccaaactactcaaaccatccacgtcacc
gaagataatcgtgaaattatcaaatgcgtgcaagaccaatatcgattactcactagccgg
tttttacccgcagttttcaagtggaatattacagcagcaaaacttggagccgacgaaaga
ttgcagaaaaaaattcttgatttaaaactgaaagttgagttggcaataaaaaagtatcaa
gagcttaatctttcaagttgcagtactgaactggacagttcttcggagtcggatttagaa
actgtagctgatttgaacaattatgaaaacgaagttaccgaagtaattagtgacaatagt
gatgaacttgaagacagcacaccgagatcaattagaagtccagcaaaaaaaaagaaaaaa
gtagacaacgaaaggagactacctctcgatattgattcttatgcaagttctcaatctaat
ataccggtaccaacattctcacgaaatccggttgaaagctactgggttcaagatccagaa
agcggacttgcagcaacagtggacttggttactcacccggtagagttaggcgaagctttc
tgtccagtcaaatggtcttgccgggctccattacccagtggaaaactttgtccaagaaac
gatcgaaaaaaatgtccactgcatgggcctatcgtagctcgggatgaactgggtcagcct
aaagacccttcgtcagtccgttcatccaagaaaccatctattcctgattggcaagagcca
gctttacttgctgaaattaaggctgctacaggtgttgatttaaccatcccaacgaaaggc
aagcgtttaaagaaaacccaatttcctaatttgacagatgtcaaggcactgaacaacaca
tcaagatcccgcctggagaaaaaagtgctgaaaaggagtaccataaagaagatatcaaag
taa
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