Daphnia pulicaria: 124335888
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Entry
124335888 CDS
T08670
Name
(RefSeq) spastin-like isoform X1
KO
K13254
spastin [EC:
5.6.1.1
]
Organism
dpz
Daphnia pulicaria
Brite
KEGG Orthology (KO) [BR:
dpz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dpz04131
]
124335888
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
dpz04812
]
124335888
Enzymes [BR:
dpz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.1 microtubule-severing ATPase
124335888
Membrane trafficking [BR:
dpz04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
124335888
Cytoskeleton proteins [BR:
dpz04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
124335888
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
Vps4_C
AAA_lid_3
RuvB_N
TIP49
AAA_5
MIT
AAA_16
AAA_22
AAA_14
Mg_chelatase
IstB_IS21
nSTAND3
DUF815
AAA_2
NPHP3_N
RNA_helicase
Motif
Other DBs
NCBI-GeneID:
124335888
NCBI-ProteinID:
XP_046645337
LinkDB
All DBs
Position
4:18481049..18484172
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AA seq
546 aa
AA seq
DB search
MWNSGGKGSSSDIVNRQKQCHIKAFELISRALELDERNFNEDKAVAIELYSEGIKELESG
ISIEIKGIGEAYESAKRLQMKMRTNLEMARDRLHFLSGMSDLQHLPLCDPEDEVLPFEFV
PARGNTEESNRKVSDQSRALPTSRPSGIAVARSATTTRKNVVTPIRRTATLKSNITPVAQ
VTNNKGSPNAKGTVTRSNATTSVTAKTTPVRLPVAAANRRPTPISSTTPNKAPSSSVGKP
TLKASGIKGVESKLASLILDEIVDGGAGVSFDDIAGLEQAKQALQEIVILPSLRPELFTG
LRSPARGLLLFGPPGNGKTLLARAVASESSAKFFNISASSLTSKYVGEGEKLVRALFGVA
RELQPSIIFVDEIDSLLCERREGEHEASRRLKTEFLCQFDGLHASHEEKILVMGATNRPQ
ELDEAVLRRFPKRLYVRLPDASARVLLLTQLLSKHNSPLGEKQLIKLAELTQSYSSSDLT
ALAKDAALGPIRELGAEKIKLMKTQQIRSITMQDFLDSLKRVRHSVSGSSLTVYEKWNRE
YGDVSI
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atgtggaactcaggtggtaaaggttcctcaagtgatatcgtcaataggcaaaaacagtgc
catataaaagcattcgaattaatctcgcgagccctggaacttgacgaacgaaattttaat
gaagataaggctgtagcaatcgaattatattctgaaggtataaaagaattggaatctgga
atcagcattgaaataaaaggaataggagaagcatatgaaagtgccaagagattacaaatg
aagatgagaaccaatttggaaatggcgagagatcgcctacattttttaagtggcatgagt
gacttacagcacttacctttgtgtgatccggaggacgaagttttaccttttgaatttgta
cctgctcgcggaaatactgaagaaagcaatcgcaaagtttctgaccaatcaagagccttg
ccgacctcacgtccttccggtattgccgtagcacgatctgcgactacgacccgaaagaat
gtcgtaactccaattcgtagaactgctactttaaaatccaatatcactcctgttgctcaa
gtaaccaacaataagggcagtccgaatgcaaaaggaacagtcaccagatcgaatgccacc
acttccgttaccgccaaaacaactcctgttaggttgccggttgccgcagctaaccgtcgc
cccacacctatttctagtactacaccgaataaagccccgtcctcatccgtaggcaagccg
accttaaaagcatctggtatcaaaggtgttgaatcaaagttagcatctttaattctggat
gaaattgtcgacggcggtgctggagtttcttttgatgacattgcaggtttggagcaagcc
aagcaagctctacaagagattgtgattcttccttccctaagacctgaactctttacagga
cttcgctcacctgctcgaggacttctcctttttggtccccctggtaatgggaaaacgctg
ctggctcgcgctgtcgctagtgaatcatctgccaaattttttaatatatccgcttcgtct
ttgacatctaaatatgtcggtgaaggcgaaaaacttgtgcgggctctatttggtgttgct
cgagaattacagccgtctatcatttttgtcgatgaaatcgattcactgctttgtgaacgt
agggaaggagaacatgaagcgagccgaagacttaaaacagaattcctttgtcaatttgat
ggacttcatgcctcgcacgaagaaaaaatcttggttatgggagcaactaatcgaccacag
gagttagacgaagccgtccttagacgtttccccaaaagactctatgtccgtttaccggat
gcctctgcaagagttctgctgttaacgcaacttctttcaaagcataacagtccactaggt
gaaaaacaactcattaaactcgccgagctaactcaaagctactctagttctgatttaaca
gccttggccaaagacgcggcccttggaccgattcgagaacttggagcagaaaagattaag
ttgatgaagacgcaacaaattcgctcgattacaatgcaggattttttggattctcttaaa
cgagttcgccatagtgtatcaggatcttccctaactgtgtatgaaaaatggaaccgtgaa
tacggtgatgtgagcatctaa
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