Daphnia pulicaria: 124335917
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Entry
124335917 CDS
T08670
Name
(RefSeq) exosome complex component CSL4-like
KO
K07573
exosome complex component CSL4
Organism
dpz
Daphnia pulicaria
Pathway
dpz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dpz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
124335917
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dpz03019
]
124335917
Messenger RNA biogenesis [BR:
dpz03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
124335917
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
124335917
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EXOSC1
ECR1_N
RRP4_S1
Motif
Other DBs
NCBI-GeneID:
124335917
NCBI-ProteinID:
XP_046645383
LinkDB
All DBs
Position
4:complement(14469734..14470789)
Genome browser
AA seq
205 aa
AA seq
DB search
MTNKESDKCLICTPGQRICLSDNQYIGGAGTYTRQGYITSCLAGVVKVTSQPDKRILIEV
RSGKEQTVVPSAGDVVTARVTQINPRWARCAILCVKDIVLAEPFRGQLRKEDVRATEKDR
VEMYTCFRPNDIILARVLSLGDAHSYVLSTAENELGVVIAYSEEGTPMVPVGWQEMQCPK
TYVKELRKVAKVSPETISNENATGV
NT seq
618 nt
NT seq
+upstream
nt +downstream
nt
atgacgaataaagaatcagacaaatgtttaatatgcactcccggacaacgcatatgtctg
tcggataaccaatatattggaggagccggaacttacacaagacaaggttatatcacatca
tgtttagcaggtgttgttaaagtaacttcacaacctgataagagaatcctgatagaggtt
agaagtggtaaagaacagacagttgttccatctgctggtgatgtggtcacagccagagta
acacaaataaacccccgctgggcacgatgtgccattttgtgtgttaaagacattgtattg
gcagaaccctttagaggacagctaaggaaagaagatgttcgtgctacagaaaaggacagg
gttgaaatgtacacatgttttcgtcccaatgacattattttagcaagagtgctctcatta
ggtgatgcccattcctatgttttgtcaacagcagaaaatgaattgggtgttgttatagca
tacagtgaagaaggtactcctatggttccagtaggatggcaagaaatgcagtgcccaaaa
acttatgttaaagaattgagaaaagttgctaaagtttcgccagaaacaatttcaaacgaa
aatgcaacaggcgtctag
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