Daphnia pulicaria: 124335930
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Entry
124335930 CDS
T08670
Name
(RefSeq) vacuolar protein sorting-associated protein 53 homolog
KO
K20299
vacuolar protein sorting-associated protein 53
Organism
dpz
Daphnia pulicaria
Brite
KEGG Orthology (KO) [BR:
dpz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dpz04131
]
124335930
Membrane trafficking [BR:
dpz04131
]
Protein recycling
Others
EARP complex
124335930
Endosome - Golgi transport
Tethering complex
GARP complex
124335930
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps53_N
VPS53_C
Vps54_N
NPF
COG5_N
AAA_13
Syndetin_C
COG4_N
Motif
Other DBs
NCBI-GeneID:
124335930
NCBI-ProteinID:
XP_046645397
LinkDB
All DBs
Position
4:complement(21396070..21399892)
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AA seq
879 aa
AA seq
DB search
MAAQEVDDFLDDELVNQYIVFPPEVIAAIDQVFPSQDPLDRADFNPVDYINNLFPTEQSL
SNIEEVISDFQGKIHHLDSEIKSCIRSQSGVSADGAAALEEAQIAICQLFARIKDIRAKA
EKSEHTVREITRDIKQLDIAKRNLTSAITTLNHLHFLVFGVDQLEVLCQKRQYSEIASLL
QGVSRVMEHFTPYLDIPQVKQLADELDQIEKRLGDQISNDFKEAFSGSGPKQPSTLTQLS
EACSVLNVIEPRFKREIIRWFVGLQLVEYSHLFQESEENAWLDRVDRRYAWVKRHLLSFE
ERMGRIFSQDWEMSERIAVEFCILTRNELTKIMAKRVNEIDVKLLLFTLQKTTQFEELLS
RRFTGASMEELLSSEKSAKKIESTNPFEEPVGKNPFEEEDETEKSVPTNQAQLTITESLT
VSPFHGLISRCFENHLNIFVDSQDKNLAELMDRFVADLKIQGPSLAQAEIEGCCVLPSCA
DLFVFYKKCLLQCAQLSTGQPMLSLTSVFKKYLREYASRLLQSNLPRSNNTSSITPVLPM
SMSSLTKDFTRELRDLSSGGAAGLIQNFQSLLKEGDMSSTSPKYSKDDIARICTILTTAE
YCLETTQQLEGKLKEKVQPALADKVDLGSEQDLFGSVISQCIQLLVADLECACEPALVTM
AKTAWQTWESVGDQSQYVTLMTSQFKHYIPFIRDCLVSSRKYFTQFCMRFVNAFMTRFVQ
QLYKCKPVGVVGAEQLLLDTHMLKTALLDLPSVGSQVTRKPPASYSKMVVKGMTRAEMIL
KVVMDASDTNAKYVAHYMRLLPESDPSEFQKILDMKGVRRSEQQLLVDLYRAQQSSQGDR
EDSSTFSAVSASNTQGLPLSPDHESSRIKKLEKLIKRRL
NT seq
2640 nt
NT seq
+upstream
nt +downstream
nt
atggcagcacaagaagtagacgattttctagatgatgaactagtaaatcaatacattgta
ttcccaccagaagtcatcgcagcaattgatcaggtctttcctagtcaggatcctttagac
agagctgatttcaatccagttgattacataaataacttatttccaactgaacaatccctt
tctaatattgaagaagtaatttccgattttcaagggaaaattcaccatttggattcagag
attaagtcatgcatccgtagccagagtggagtatctgctgatggtgcagctgctttggag
gaagcccaaatagcaatctgccaactgtttgcacgtattaaagacatcagagccaaagct
gaaaaatcagagcacactgttcgggaaataacaagggacataaagcaactagacatagcc
aagaggaatttgacatctgcaattacaactcttaaccatttacattttcttgtttttgga
gtggaccagttagaagtgctatgtcagaagagacagtattctgaaattgctagcctattg
caaggtgtaagtcgagtaatggaacattttactccatatttagatattcctcaagtgaag
caactggctgatgaattggatcaaatagaaaaaaggcttggagaccaaatttcaaatgat
tttaaggaagcattttccggtagcggccctaaacaaccgtcaacacttacccagcttagt
gaagcttgctcagttctcaacgtaatcgaacctagattcaagcgtgaaattatccgttgg
tttgttggtcttcagttagttgagtacagccatttgttccaagagtcagaggaaaatgca
tggttagatcgagtcgatcgccgatatgcttgggtaaagcgtcatctcctgagctttgag
gagcgaatgggacgtattttttcacaagattgggaaatgagcgaacgcatagctgttgag
ttctgcattctcactagaaatgaactgacaaaaataatggccaaacgagtaaatgaaatt
gatgtcaaacttctactgtttacattgcaaaaaaccacgcagtttgaggagcttctatca
cgaagatttactggtgcctccatggaagagcttttgtcttctgaaaagtctgctaaaaaa
atagagagtactaatccttttgaagaacctgttggtaagaacccttttgaagaagaagat
gaaactgaaaagtcagttccaactaaccaagctcagttaacaataaccgagtcacttacg
gtgtcaccgttccatggattaattagtcgctgctttgaaaaccatctaaatatatttgtc
gatagccaagacaaaaatctggcggaactgatggatcgctttgtagcagatttaaaaatc
caaggtccttcactagcccaagcagagatagagggttgctgtgtgttaccttcgtgtgca
gatctttttgttttctataaaaaatgcctcctgcaatgtgctcagttgagtacaggtcaa
cctatgctttctttaacatccgtctttaagaaataccttagagaatacgcgtcaagatta
cttcagagtaatttaccaagatcaaacaacaccagctcaataactccagttttacccatg
agcatgagtagcctgacaaaagattttactagagaattgcgtgacttgagttcaggcggt
gctgctggattaattcaaaattttcagagccttcttaaggaaggtgacatgtccagcact
tctcctaaatattccaaagacgatattgctcgaatctgcacaatcttgactacagctgaa
tattgtctagaaaccacacagcaactagaaggaaaattaaaagaaaaggttcagcctgca
ttggctgataaagttgatctcggatcggaacaggatctctttggaagtgtcatcagtcag
tgcattcaactcttggtggcggatttggaatgtgcctgtgaaccggcactcgttactatg
gctaagacggcttggcaaacttgggagagcgtcggcgatcaatctcagtacgttacccta
atgacttcacaatttaaacactatataccctttatccgcgactgcctggtctcatcaaga
aaatactttacacaattttgtatgcgattcgtcaatgccttcatgactcgattcgtccaa
caactgtacaagtgcaagccagtgggtgttgtgggagcagaacagttactgcttgacacc
catatgcttaaaacagctttacttgatttgccttctgttggaagtcaggtgacgcgtaaa
cccccggcgagctattcaaagatggttgttaaaggtatgacgcgtgcagaaatgatactg
aaagtagtaatggacgcctccgatacgaatgctaaatacgttgcgcactacatgcgatta
ttgcctgaatcggatccttccgagttccaaaaaatactggatatgaaaggagttcgccga
tctgaacagcagctcttagtggacctttatcgtgctcagcaatcaagtcaaggagatcgt
gaagacagttccactttctcagccgtttcagcaagtaacacacaaggattacctctaagt
cccgatcatgaatcgagccgcataaaaaaacttgagaagcttattaaacgtcgcctttaa
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