Daphnia pulicaria: 124336005
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Entry
124336005 CDS
T08670
Name
(RefSeq) Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1-like isoform X1
KO
K18443
golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1
Organism
dpz
Daphnia pulicaria
Pathway
dpz04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
dpz00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
124336005
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dpz04131
]
124336005
Membrane trafficking [BR:
dpz04131
]
Endosome - Golgi transport
Arf GTPases and associated proteins
Arf GTPase associated proteins
124336005
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Sec7
Sec7-like_HUS
TPR_28
Motif
Other DBs
NCBI-GeneID:
124336005
NCBI-ProteinID:
XP_046645511
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Position
4:1933754..1941107
Genome browser
AA seq
1911 aa
AA seq
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MAQILMEELSSNGLHVIQGELSILLNSMRRPFKWSSQIYQQEEEQDVLIKNLNQLKEQLN
QVSSLAELDLLTVLGPFLEVIRSEDTSGPVTELALSAVFKFLSYGLIDPGQESAAIVVES
LADAVTHARFVGTDSGSDEVVLMKILHVLRMLVLHPAGILLSNESVCEIMQSCFRICFET
RLSELLRKSAEHSLSEMVRLLYERVPQFPLQEIKGSVNYKKLKMRTAAYDPSRNKKKSRS
PKPRPKTLAVHANGNGTSKSGLTVETPSSPCVDTPTTKESTESFPMPNPADENATADPDL
NAETTATTCQSIDHSSSVEAETPVVTISAAPEEASSPQSIDAAAQDYVNAQGVRFISNES
TDQESGGRTHVPYGLPCVRELLRFLVSLINPLERQNSEAMIHVGLRLLTIAVETAADVIA
AVPSLQTLIQDETCRSLFSLLNSERLSVVAAACRLCFLLFESARTRLKFQLETYLLKLME
IVAHESPKVAYERRLVALEAISQLCRIPGLVTELYLNYDCDCHTSDLFQELIKHLSKNVA
PVAAGGIYTIHLLSLEALLIVVDSIEAHCLTQGNGKGNGQLEHQSSFSMPPAARKSRLVE
PAADVPSEEQLSSVRHKKKLLIAGAEQFNSKPAKGIQFLQENGLLADPLDPTQVAALLRE
CSRLEKKMIGEYISNRKNLNVLEAFVRSFDFHGIRIDEALRYYLEAFRLPGEAPLISLLM
EQFADHWFKCNDAPFFNADAAFTLAYAVIMLNVDQHNTNVKRQNIPMTVDEFKRNLTKVN
GGQDFESTMLEEIYQAIRSEEIVMPAEQTGLVKDNYLWKVLLRRGATKDGRYIHAPNGLF
DRDLFTLSWAPTMAALSCLLDKAQPEGSGIVEWVLQAIKKMSTVAAHFGRSDVFDHVVQT
MIKFSCLLPSGDNPPIQAVAFGQNRKAQVATTTVFHLVQRHGDILRDGWKPLVDCIMQFY
RMRVLPDELVEAEDPFDPNTKVKLLGEDIPLRSETSGLFSSIYSYIALSEGSSSGRAGSA
EEQEALSRAKACAVECNIEQLISDSKFLQTNALQDFIKVLIASNDVASSSTDEFTIIFVL
ELIIRITVQNRDRVTCIWNPVRDHIYSLVMGAAASDRIFILERSIVALLLLTGRLMRRED
VAPIVLQSLRMLLMLKPQVLSKVSRQVSYGLHELLKTGAANVHTTGDWRVLFTLLECVGA
GAQPPSVRGGDLAPSVSMEAITESAAVAANANTGAPADVSGSIDRGYTSDSELYESRANR
SVSAPGASGVHGSSPELNVPVGGGGWIFVGRQGEIEHLKGKQAPGREYNIVHDRKLLAHD
PLAFVKSCESLTFLIRDVAHITPENFECAVQCIRTFVEASLNGGTAAANKPNHGGRPVPQ
ENFRRSKSFHTSDQSTEWNEVQELPTNYHQVPVQLLDLMHTLHTRAAQIYQWWASESGEA
DVASADEEKNATTSFQLGPSLWCRGWCPLLQGIARLCCDARKQVRTTAITYLQRSLLVHD
LQSLSASEWESCFNTVLFPLLAKLLEPQRSSATTRAQMQADHSSWEETRIRAATLLSKVF
LQHLGPLIQLPTFTALWLTLLDFMDKYMHVENNDLLAEAVPEMMKNLLLVMETAGVFGTN
ADELDQTSNKTSNTSSPQALQMKTQLWNMTCDRIDVFLPGLRQEITRSKTPVARVQALPL
VEDSSLTTIQIPEAEVPELGQEAISLESIPSEQIATDPEPPRPENVLESEQVSLTNPAVD
IPEEQTLSGQTTIDDTTNSTAKVSEETGSSSTNFVPSSVFSVWNVPDPSDAAALFFHDLT
PAPADDTPAISDTSSILEDEPINTLDCHQTPISLIPEDGSDIPVVPLPVFSTAVPAVEEN
KAADATAHENQDPEEPQSVADHLPLLLVHEVNDPSLTPISILAPINTQEDN
NT seq
5736 nt
NT seq
+upstream
nt +downstream
nt
atggcgcaaattttaatggaggaattatcctctaatggtctccatgtaattcaaggggaa
ctatccatcttgcttaattctatgagaaggccattcaaatggtcttctcaaatctatcag
caggaggaggagcaggatgtcttgatcaaaaatttaaatcagctgaaagaacaactgaat
caagtctcatcactagccgagttagatttattgacagtacttggtccttttcttgaggtg
attcgatccgaggacacatctggtcctgtcactgaacttgcattgtctgcagtcttcaag
ttcctgtcttatggattgattgatccaggccaggaatcagctgccattgtagttgaaagt
ttagctgatgcggtgacacatgcaagatttgttggaactgacagtggcagtgatgaagtt
gttctaatgaaaattttacatgtcttgaggatgttggttcttcaccctgctgggattctg
ctctctaatgaaagtgtttgcgagatcatgcaaagctgtttccgaatctgctttgaaaca
cgtctaagtgaactcttgagaaaatctgctgaacattctctgagtgaaatggtgcgtctc
ctttacgaacgagtgccgcagtttcctctacaagaaattaaaggatcagtcaattacaag
aagttaaaaatgagaacggctgcctatgatccttcaaggaataagaaaaagtctcgatct
cctaagccgagaccgaaaacattagccgttcatgccaatgggaatggaacgtccaagagc
ggacttacggtcgagacgccgtctagtccctgcgtcgatacgccaactaccaaagagagc
actgaatcatttcccatgccaaatccagcggatgaaaatgcaacagccgacccggatttg
aatgccgaaacgacggcgactacttgccaatcgattgatcattcctcttcagtggaggcg
gaaacgcccgtcgtgactatttcagcggcaccagaagaagcatcttctcctcaaagcatt
gacgctgctgcccaagactacgtcaatgcacagggtgtccgcttcatctcaaacgaatcg
actgatcaagagtctggtggccgcacccatgtgccctacggattaccctgcgtccgagag
ttgctacgctttctagtgagcctcatcaatccgttggagcgacagaatagcgaggccatg
attcacgttggtcttaggctgctcaccatagccgtggagacagcagcggacgtgattgcc
gccgtgccatcgcttcagactctgattcaagacgaaacgtgtcggtcactcttttcgctt
ctgaattcagagcgattatccgtggtagccgccgcttgtcgcctctgtttcttgctattc
gaatcggcacgaacgcgacttaaattccagctggaaacttatctcctgaagctgatggag
attgtggctcacgagtcaccaaaagtagcctacgagcggcgattagtcgctcttgaagcc
atttcacaactttgtcgcattccaggcttagtgacggagctctatttgaattacgattgt
gattgccatacatcggatttgttccaagagctcattaaacatctgtcgaagaacgtagct
ccagtggcggccggtgggatctatacgattcacttactatcgttggaagcgttgcttatt
gtcgtggactcgatcgaggctcattgcctcacccaggggaatggcaaaggtaacggtcag
ttggagcaccagtcgtctttttcgatgccgccagcagctcgaaagagccgtttagttgag
ccggctgcagacgtgccctcggaggagcaactctcttcagtccgccataaaaagaagctg
ttaatagcaggtgctgagcaattcaacagcaagcccgccaaaggaattcaatttctccag
gagaatggccttttggcggatccattagatccgacgcaggtagccgctctactccgagaa
tgttcacgactcgagaagaagatgattggagagtacatcagtaaccgaaaaaatctcaac
gtcctcgaagccttcgtccgttctttcgatttccacggcatccgcatcgatgaagctctc
agatattacctggaagccttccgtctcccaggagaggctccgttgatttctctcttgatg
gaacagttcgccgaccattggttcaaatgcaacgacgctccattcttcaacgccgacgca
gctttcacgctggcctacgccgtcatcatgctcaacgtcgaccagcacaacacgaacgtc
aagaggcagaacattcccatgacggtggatgagtttaagcgaaatttgaccaaagtcaac
ggtggtcaggatttcgagtctacgatgcttgaggagatttaccaggcgattcgcagcgaa
gagattgtcatgccggctgagcagacgggattggtcaaggacaactacctgtggaaagtg
ttgctgcggcgcggggccaccaaagacggacgctatattcacgctcccaacggactcttt
gatcgcgacctgttcaccttgtcctgggcgcccacaatggcggctctaagctgtctgttg
gacaaagctcagcctgaaggtagcggcatcgtcgaatgggttttgcaagccatcaagaaa
atgtcgacagtggcggctcactttggccgcagcgatgtctttgaccatgttgtccagacg
atgatcaagttctcttgtctactccccagtggcgacaacccacccatccaggccgtcgct
tttggacagaaccgcaaagcccaagtggccacgaccacagtattccaccttgtgcaacgt
catggcgatatcttacgggatggatggaagcctctggtcgactgcattatgcagttttac
agaatgcgcgtgctgccggatgagctggtcgaggccgaagatccttttgatcccaacact
aaagtgaagctcctgggagaggacataccgcttcgatcggagacctcgggattgttcagc
tccatctattcttacatcgccctctctgagggatcgtccagtggaagggcagggtctgcc
gaagaacaggaagcccttagccgggccaaagcttgcgctgtggagtgcaatattgaacaa
ctgatttcagactcgaaatttctacaaactaacgcccttcaagatttcatcaaagttttg
attgcttccaacgatgtggcctcttccagcacggatgaatttacaatcatctttgttctc
gaattgattatccgcatcaccgtccagaatcgcgatcgagtcacatgcatttggaatcca
gttcgcgatcacatttacagtttggtaatgggagctgcagcgtctgatcgaattttcatt
ctggaacgctccatcgtcgctctccttctgttaactggtcgattgatgcgacgcgaagat
gtggcacccattgtacttcagtctctaagaatgctgttaatgctcaaacctcaagtttta
tcaaaagtgtctcgacaagtttcttatggtcttcacgaattactaaaaactggagcggcc
aacgtccatacgacgggtgactggcgcgtgctcttcaccttgttggaatgcgtcggagct
ggcgcccagccaccgtcagttcgcggaggtgatttggctccttctgtctcgatggaagcc
attaccgagtctgccgccgttgctgccaatgcaaacacaggcgcgcctgctgacgtgtct
ggttcgatcgaccgggggtacacatccgactctgagctgtacgaaagtcgagccaatcga
tcggtttcagctcccggtgcttcgggggtacacggatctagtccagaattaaatgttcca
gtcggcggaggtggctggatttttgtcggccgtcaaggagaaattgaacatttgaaaggc
aaacaagctcctggaagagagtataatattgtgcacgaccgcaaattgttggcccatgat
ccattggcttttgtcaaatcgtgtgagagtttgacattcctcattcgcgatgtggctcac
ataacgcccgagaatttcgagtgcgctgtccagtgcattcgcacctttgttgaggccagt
ctgaacggtggaaccgctgccgcgaataaaccgaatcacggcggccgccctgtgcctcaa
gagaatttcagacgttccaaatcgttccacacgagcgaccagtcgacagaatggaacgaa
gtccaggagttacccaccaattatcaccaggttcctgttcaattactggatctgatgcat
acactgcacaccagggcagctcagatataccagtggtgggcatcggaaagtggcgaagcg
gatgtggcttcagcggacgaagagaaaaacgctaccacaagcttccagttgggtccatct
ctgtggtgtcgtggctggtgtcctttactccaaggcatcgcccgtctctgctgcgatgct
cgtaaacaggtccgcactacggccatcacttacttgcaacgatctcttctggtccacgac
ctccagagtttgtcggccagcgaatgggaatcttgtttcaacacggtgctcttcccgttg
ctggccaagctgctggagcctcaacgttcttcggccacgactcgagctcagatgcaagcg
gatcattccagctgggaggagactcgaatccgggccgccactcttctctcgaaagtgttt
ctccagcacttggggccgctcattcaactaccaacgttcaccgccctgtggctgacgttg
ctggactttatggacaagtatatgcacgtggaaaacaacgacctgctggccgaagccgta
cctgaaatgatgaagaacttgttgctggtcatggaaacggccggcgtatttggaacgaac
gcggacgaattggatcaaacgtcgaataaaacatcgaacacgtcctcgcctcaagcgctt
caaatgaaaacgcaattgtggaacatgacttgcgatcgcattgacgttttccttccgggt
ctgcgtcaagaaatcactcgttccaagactccggtcgccagagtccaggctctacctctt
gtggaagattcatctttaaccaccatccaaattccagaagcggaagtgccggaattggga
caagaagccatttcattggagtccataccatcggaacaaattgcaaccgatcctgagccg
ccaagaccagaaaatgtattggaatccgaacaagtttccctgacgaatcctgccgttgat
attccggaagagcaaactctttctgggcaaacgacgatcgatgacaccaccaattccact
gcgaaagtttctgaggaaacgggatcgtcatcaaccaactttgtcccctcttccgttttt
tccgtttggaatgttccagatccgagcgatgcggcggctctgttcttccacgatctgacg
ccagctccagctgacgacacaccggcaatcagcgacacttcaagtattctcgaagacgaa
cccatcaacactttggactgtcaccagacgcccatctctctcataccggaagatggatcc
gatattccggttgttccgttgcccgtgtttagcaccgccgtaccagcggtggaggagaat
aaagctgccgatgctacagcacacgaaaatcaggatcccgaagaaccgcaatcagttgca
gatcatttgcctctgcttttagtccacgaagtcaacgatccatcactgacacctatatcg
attttagctccaatcaacactcaggaggataattaa
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