Daphnia pulicaria: 124336016
Help
Entry
124336016 CDS
T08670
Name
(RefSeq) DNA topoisomerase 2-like isoform X1
KO
K03164
DNA topoisomerase II [EC:
5.6.2.2
]
Organism
dpz
Daphnia pulicaria
Brite
KEGG Orthology (KO) [BR:
dpz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dpz03032
]
124336016
03036 Chromosome and associated proteins [BR:
dpz03036
]
124336016
Enzymes [BR:
dpz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
124336016
DNA replication proteins [BR:
dpz03032
]
Eukaryotic type
DNA Topoisomerases
124336016
Chromosome and associated proteins [BR:
dpz03036
]
Eukaryotic type
Chromosome condensation proteins
Other regulators of chromosome condensation
124336016
Centrosome formation proteins
Centriole proteins
124336016
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
TOPRIM_C
DNA_gyraseB
Toprim
HATPase_c
DTHCT
Motif
Other DBs
NCBI-GeneID:
124336016
NCBI-ProteinID:
XP_046645533
LinkDB
All DBs
Position
4:complement(956085..962373)
Genome browser
AA seq
1569 aa
AA seq
DB search
MASDGPLKSLFAKMNKGTVASEAATNGDAGKKNGANKRLSVERIYQKKSQLEHILLRPDT
YIGSVEPVKDVMWVYEEDAGMIQREITYVPGLYKIFDEILVNAADNKVRDSKMDTIKVDI
DPKENVITIYNNGKGIPVVEHKEEKMYVPSLIFGHLLTSSNYNDEEEKVTGGRNGYGAKL
CNIFSTSFELETASKDEKKKFKQTWTDNMTKAGTPKIVNYNEADFTQITFSPDLAKFKMD
SLDKDTVALLSRRAFDVAASTRGVKVFLNGKRLPIKNFKDYVDLCLKGKEDDDGAQLKCV
YEAVSERWEIAVAPSDKGFQQVSFANSIATTKGGRHVDYVTEIVSKYLQEFLKKKNKSGI
NVKPHQIKNHLWIFVNCLIVNPTFDSQTKENMTLQAKSFGSTCKPSEKFFNALNKSGVIE
GVMTWAKFKAQTELNKACSGKKQTKLKGVPKLEDANNAGTKHSIDCTLILTEGDSAKSLA
VSGLGVVGRDKYGVFPLKGKVLNVREATHKQILENAEINNLIKILGLQYKKKYESVEDLK
SLRYGRLMIMTDQDQDGSHIKGLLINFLHHNWPSLLRLPFLEEFITPIVKATKGTGASAK
SLSFYSLPEFEEWKTNTENWPTYRIKYYKGLGTSTSQEAKGYFSDMQRHRILFHHDGDQD
DYAILMAFSKKHIEQRKEWLTSWMEECKRRRELGLPELYLYEKDTKRVSYRDFVNKELVL
FSNMDNERSIPSLMDGFKPGQRKVLFTCIKRNDKKEIKVAQLAGSVAEHSAYHHGEASLM
GTIIGLAQDFVGSNNINLLLPNGQFGTRLQGGKDAASPRYIFTLMSKLTRIIFHPHDDPL
LKHQMDDNQRIEPEYYAPIIPMILVNGTDGIGTGWMTKILNYNPREVVANVKRMLDGEEP
IPMDPWFKGYRGTIERIDRHRYAISGELAVLSGTEMEITELPLRVWTQNYKESVMETLLH
GSEKIPPLITDYKEYHTDTTVRFIVTMSEEKMQQAEAEGLHKAFKLQTTHSLTSMVLYDS
NGCLKMYDTVEDILKEFFTVRLGYYGKRKDYLSGVLQAESQRLSNQARFICEKCDNVLIV
ENKKAKVLVEELRRRNYDPDPVRIWKKNQKNNINAENEEEQETNAENEEGAVKIGDYDYL
LDMPMRSLTYEKKEELLKKRDIKMKEYDILLKKSPADLWREDLDHFMVVLKEVEDAEQEE
LNENKKPTKAAPLAKGRKKALIAEVAPSPKGRRIVPVIDNELRKKIEKLTIAKEKKKEKA
LKKESPEVERDSFDAALDDSNKSLGEKLGVSPVKGAKGKKGGKNDGFKQTKLSFTTKKGD
KDAEKAEDKDEFDLALEEAVPLRERTNRRAAATAAKFTLDDDSDEEGKASDNDSDLIISD
SDEDFDFAKPKTVAKKKVARPVNSDDDMSAAKRPKKDAASLNVSSDELFDSLVRSSPVKS
AREPEPLSSPDIVMIASEDDEVKPKGRGRGRAPKAGGPAKPKKAPAPKAAGAKAAKPAAK
AKPKTSSPKKKSRKDSDSDEDMFSSKSPVKKANSSDDFNDSSFEVRPRATTGRAKKAVKY
ATFSSDEDS
NT seq
4710 nt
NT seq
+upstream
nt +downstream
nt
atggcttctgatgggccattaaagtctttgtttgcaaaaatgaacaaaggtactgttgca
tctgaggctgccacgaatggagatgctggcaagaagaatggagccaacaagagactttca
gtcgaaagaatttaccagaagaaaagtcagcttgagcacatcttgcttaggcctgatacc
tacattggatcagtggaacctgttaaagatgtcatgtgggtttatgaagaagatgctgga
atgatccagagagaaattacttatgtacccggactgtataagatctttgatgaaattctc
gtcaatgctgcagacaacaaagtcagagactccaagatggataccattaaagtcgacatt
gatccgaaagaaaatgtcatcacgatctacaataatggaaaaggcattcctgttgtggaa
cacaaggaagaaaagatgtatgttccctcactgatctttggccacttacttacttcatcc
aactacaatgatgaagaagaaaaagtaactggtggtcgaaatggttatggtgcaaaactg
tgcaacattttcagcacttcatttgaattggaaacagcatctaaagatgagaagaaaaaa
ttcaagcaaacctggactgacaacatgactaaagctggaactcccaagatcgtgaactac
aatgaagcagattttacacaaatcactttctcccctgatctggcaaagttcaaaatggat
tccctggataaggacacagttgctcttctgtctcgccgtgcttttgatgtagccgcttca
actcgtggcgtgaaagttttccttaacggcaaacgtcttcctatcaagaatttcaaggac
tacgttgatctctgtctgaagggtaaagaagatgatgatggagctcaactgaaatgtgtg
tatgaagctgttagtgaacgctgggagattgcggtagctccttccgacaaaggattccaa
caagtttcattcgcaaactcaatcgcaactactaaaggcgggcgacacgttgactacgtt
actgagatcgtatcaaaatatttgcaggaatttcttaaaaagaaaaacaagagtggcatt
aatgtcaaacctcatcagataaagaatcacctgtggattttcgtcaactgtttaatcgtc
aacccaactttcgattctcaaaccaaggaaaacatgactctccaggccaaaagctttggt
tccacttgcaaacctagcgaaaagttttttaacgcgctcaacaagtctggcgttatagaa
ggtgtaatgacttgggccaagtttaaggcgcaaactgaattgaacaaggcttgtagtggc
aagaaacaaacaaaattgaagggcgtccccaaactagaagacgctaataatgctggcaca
aaacattcgatcgactgcactctcattctaactgagggagactcagccaagtccctagct
gtttctggtcttggtgtggtcggccgtgacaagtacggtgtctttcctctcaaaggaaag
gtgctcaacgtgcgggaagccacacataaacaaattctggagaacgccgaaatcaacaat
ttgatcaagatccttggattgcagtacaagaagaaatacgagtccgttgaagatctcaaa
tcacttcgttatggtcgtttaatgatcatgactgatcaggatcaggatggttctcacatt
aaaggcctgctcatcaacttcttgcaccataattggccatcactattgcgcttacccttc
cttgaagaattcatcacacccattgtcaaagccaccaaaggaacaggggcatcagccaag
tcactaagcttctactcgttgcccgagtttgaagaatggaagaccaatacagagaactgg
cctacctatcgtatcaagtactacaaggggttgggaacttcgacgtcccaagaagcaaaa
ggttacttttccgacatgcagcgacatcgaattctcttccaccacgatggagaccaagat
gactacgctattttgatggctttcagcaagaagcacattgaacagcgcaaagagtggcta
acttcttggatggaggagtgcaagaggcgccgtgaacttggactgcctgagctttatctg
tacgaaaaagacaccaaacgagtaagctaccgtgacttcgtcaacaaggaattggtgctg
ttcagcaacatggacaacgaacgatccatcccttcactcatggatggtttcaagcctggg
caacgtaaagtcctctttacttgcatcaagcgaaatgacaagaaagagatcaaggtcgcc
caattggctggctctgtagctgagcactcggcataccatcacggcgaggcttctttgatg
ggcacaatcattggtttggctcaagacttcgtcggatccaacaacatcaatttgcttctt
cccaatggccagtttggtactcgcctccagggaggtaaagatgctgccagccctcgttat
atcttcactttgatgagcaagctgactcgcattatttttcacccacacgatgatccattg
ttgaaacatcaaatggacgataaccaacgcatcgaacccgaatattatgctccgattatt
cctatgatcttggtcaacggaactgacggaatcggtaccggttggatgacaaagattctg
aattacaatccacgagaggtcgttgctaatgtcaagcggatgttagacggcgaagaaccc
atccctatggatccgtggttcaaaggttacaggggcactattgaaaggattgatcgccac
cgatatgctatcagtggtgaattagcagttctgagcggtacggaaatggaaattacggaa
cttcctctacgtgtctggactcaaaactacaaggaatccgtaatggagaccttgttgcac
ggctcagagaaaatcccgccccttatcactgactacaaggaataccatacggatacaact
gtgcgatttatcgttaccatgtcggaagaaaagatgcaacaggcagaagccgagggactg
cataaggcttttaaactccagactacacactccctgacatccatggtgctgtatgactct
aatggctgtctcaagatgtacgacacagttgaagatattttgaaagaattcttcactgtc
cgtcttggatattatgggaaaagaaaagattacttgtccggtgtacttcaagctgagtct
caaaggctctcaaatcaagccagattcatttgcgagaaatgtgacaatgtcttgattgtc
gagaacaaaaaggctaaagttttggtggaggaattgcgtcgtagaaattatgatccagat
ccagttcgtatctggaaaaagaatcaaaagaacaacataaatgcggagaacgaagaggag
caagaaaccaatgcggagaatgaagaaggtgctgtcaaaattggcgactacgactacttg
cttgacatgcccatgcgctctcttacctacgaaaagaaagaagagttgttgaagaaacgg
gatatcaagatgaaggaatatgacatcctcttgaaaaaatcgccggctgatttgtggcgg
gaagatctggatcattttatggtggtgttaaaggaggttgaagatgctgagcaggaagag
ttgaatgaaaacaaaaaaccaaccaaagctgcaccactggcgaaaggcaggaagaaggcg
ttaatcgctgaagttgctccttctcctaaaggtcggcgaatcgttccagtcatcgataat
gaattgcgcaaaaagattgaaaagctcactatcgccaaagaaaagaagaaagaaaaggcg
ctgaaaaaagaaagtcctgaagttgaacgagattcgtttgacgctgctctcgatgactca
aacaagtctttgggtgaaaaattaggggttagcccagtcaaaggagcaaaaggaaagaaa
ggaggcaaaaatgacggatttaagcagaccaagctgagtttcacaaccaagaaaggtgat
aaagatgctgaaaaagccgaagataaagacgaattcgacctggcattggaagaagccgta
cctcttagagagagaaccaatcgccgagccgccgccactgccgctaaattcactcttgac
gatgattctgatgaggaaggaaaagcttccgataatgattccgaccttataatcagcgat
tcggacgaagatttcgactttgcaaagcctaaaacggttgccaagaaaaaagtagcgcga
cccgtcaattcagatgatgacatgtctgctgctaaaaggccaaagaaagacgctgcttcg
ctaaatgttagctctgatgaattgttcgattcattagtccgctcatcacctgtgaaatcg
gcacgtgaaccagagcctctatcttctccagatatcgtcatgatagcgagcgaagacgac
gaagttaaaccgaaaggaagaggccgtggaagggcaccgaaagctggtggtccagccaaa
cccaaaaaggcacctgcccccaaagctgccggcgccaaagcagctaaacctgctgccaaa
gccaagccgaagacgtcttcacccaaaaagaagtctcgcaaggattccgattcggatgaa
gacatgttttcttctaaatcccctgtaaagaaagccaactcgtccgatgacttcaacgac
agcagctttgaggtcaggcctcgtgcaactaccggccgagccaaaaaagccgtcaagtac
gctactttctcaagtgacgaagattcttaa
DBGET
integrated database retrieval system
