Daphnia pulicaria: 124336017
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Entry
124336017 CDS
T08670
Name
(RefSeq) neogenin-like isoform X1
KO
K06766
neogenin
Organism
dpz
Daphnia pulicaria
Pathway
dpz04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
dpz00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
124336017
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
dpz04515
]
124336017
Cell adhesion molecules [BR:
dpz04515
]
Immunoglobulin superfamily
DCC/UNC5 family
124336017
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
fn3
I-set
Ig_3
Neogenin_C
Ig_2
ig
FN3_DSCAM-DSCAML_C
Pur_ac_phosph_N
Fn3_VIN3
V-set
Interfer-bind
C2-set_2
Ig_RIMBP2
Ig_Rha78A_N
Ig_4
Ig_5
Mid2
Kinetochor_Ybp2
Motif
Other DBs
NCBI-GeneID:
124336017
NCBI-ProteinID:
XP_046645535
LinkDB
All DBs
Position
4:2050042..2065355
Genome browser
AA seq
1536 aa
AA seq
DB search
MMGWRLPSLRWLNRPSYSSLRPRVYWIAILVVLVCCQDIGYCSSQAAAGDEDLVFTAEPQ
DAVVSKNSSVVIDCGVPAGWLRDMEEAGPAPFIEWKRDGVLLSLNGENRRSVLANGSLSF
TSVQHSRNERPDEGLYQCSATRPSVGTIISRAAKLQIASLPRFELEPKDVAVRVGDTARF
NCLVMATPAAHVRWLKDDLPLNLDPARMIVLPSGALELEQVQLSDQGYYRCNVSNVDKHR
ISAEAKLNVHSELEEGGKPEAPNFLAVPRTTVAIEGTRVTLECAANGHPRPDITWLKDGT
TIDLDHLGSRFKSVGSGSLQIDAVTEEDVGVYQCRAENTEDSVDVTAQLEVQVPPRYITR
PRSTTSHEKDDAELECQLYGRPEPTVQWTKNGELIIESEYFQIINGNNLKILGLVASDFG
IYQCIGSNPAGNVQAAASLTIYSSDYDNGTSANPGMDLTTATSPTADSGTREAAAAVPPP
PDQTSESSQPDGSITPDGNNDGSTSSLPSAPRDVEALIVSSRFVTLRWKEPVRTNGQIIG
YSIFYRQEGSERERVVNTSRSRLEEVNVPGLQPGKKYSLRVAAFNEAGAGASTNSLEVET
LVEPHVLQAPANLSVQAVSSVSLMASWESPDLAAAGGGASHGGQHLPIRNYKLFYMEVGS
AEEHEVVTSHTSHLIHGLKPYTEYSVWVVAFNDNGPGTSTEEATARTWSDLPSDTPQNVV
VEPASSSSVIVRWEPPSLENQNGIITGYKIRYKPKTGRGRLPLNPGSSNAGSTATTDGSR
RLYTLTGLVRGTEYQVRVSALTVNGSGPMTEWMTAETFENDLDESQVPEPPSSLRARPMT
NSISVSWNPPSNQNVMVRGYTIGWGKGIPDVYSKLVDGKQRAFVIEKLEANSEYVISLRA
YNQMGDGRPIYETVRTREESTPEPPSPLIPPVGLKAIVLSSTTVVLYWTDTTLPRSQTVA
DSRYYVVRYTSSHTSSNPRYRYMNSTVLNCMLDDLKPNTQFEFAVKVIKNRRESPWSLVV
PNTTFEAAPSSPPRDLTVVPVEENPSAINLNWQPPKQPNGQITGYVIFYTTDSSQRDRDW
VVEGVVGDKMTTTIKGLTPDTAYFIKIQARNNKGYGPFSSIIQFRTNPSNGMTYHDATPV
SRDSRGISSMTLYIILGIATGIIVILLIVVLVVVFRRRDSGVTNSPDRSKKGYVKGNVKG
GPGKLGKADNPPDLWIHHDQMEMKGLDKSLHRSGSVNTVSPLNMRRSQDLDSLDGMASGS
TAGRGPSTAANDSLDRRAAYVTAYAGSSNSLRRPIKPKSLLISVATTTQPVREPVATVTP
IPNGSLNQHSDSRPVYPAAPRPGIYPSAGPSAGGRAHVTVDVSAPPLEPTYGSQGSYDSR
SSLVHPPPGNMAMMVGQPPSMAPPSSALMAVADAKRNTQLGHPLKSFTVPAPPPQSAPPV
KIVSPNSGNNRQSVNPMTAQSSPYKKSLASGPVTSPPPLHKTNSSGGVRSGANDLIKSPE
KIIQSSYSTEELNQEMANLEGLMKDLNAITANEFGC
NT seq
4611 nt
NT seq
+upstream
nt +downstream
nt
atgatgggctggcgtttaccaagtttacgatggttgaaccgtccaagttattcttccctg
cggcctcgtgtttattggattgccatcctcgtcgtccttgtctgttgccaagacattgga
tattgctccagccaagcagcagctggcgatgaggatctggtgtttacggccgaaccgcag
gacgcggtcgtgagtaaaaattcctcggttgtcatcgactgcggtgttccagctggctgg
cttcgcgacatggaggaggccggcccggccccgttcatcgaatggaaacgagacggggtc
cttctcagtctcaacggagaaaacaggagatcggtgctggccaacggctccttgtctttc
accagcgtccagcacagtcgtaatgagcgaccggacgagggactctatcaatgctcggcc
accagaccgtcggtgggcaccatcatcagccgggcagccaaattgcaaatcgcttcgttg
cccagatttgaactggagcccaaagacgtggccgtccgtgtcggcgacacggcccgtttc
aactgtttggtcatggcgacgccagctgctcacgtccgttggttgaaagacgatctaccc
ctaaatttagatccggctaggatgattgtgctgccttcaggagccttggaactggaacaa
gtccaactttctgatcagggctattaccggtgcaatgtgtccaacgtggacaagcaccgc
atcagcgccgaagccaaactcaatgtccactctgagctggaagagggcggcaagccggaa
gcgcccaacttcctggccgttcccaggaccacggtggccatcgaaggcactcgggtcacg
ctggaatgcgcggccaacggtcatcctcgcccggatatcacctggctcaaagacggaacc
accatcgatttagatcatttgggcagccgattcaagagcgtgggctctggcagtttgcag
attgatgccgtgacggaggaggatgtgggcgtgtaccagtgccgggcggagaacacggaa
gactcggtcgacgtgacggcccagctggaagttcaagtgcctccgcgctacatcacccgc
ccgcgcagcacaacctcccacgaaaaggatgacgccgaactcgagtgccaactttacgga
cggccagaacccaccgtccagtggaccaaaaatggagaactaatcatcgaaagcgaatat
ttccagattatcaacggaaataatttgaagattttaggtctggtggcctccgactttggt
atctaccaatgcatcggctccaacccggccggcaacgtccaggccgccgccagtttgacc
atctattcatcagattacgacaacggcacgtcggctaaccctggcatggatttgacgacg
gctacatctcctactgccgactcagggacacgcgaggcagccgctgctgtgccgccacca
cccgaccagacgtccgagtccagccaaccggacggttcgatcacgcccgacggtaataac
gacgggtcgacgtcgtcactgccatcggcgcccagggatgtggaagccctgattgtgtcg
tctcgcttcgtcacgctcagatggaaggagcccgtcagaaccaacggacaaattattggc
tactccattttctaccgacaggaaggatcggagcgggaacgggtggtgaatacgagccga
tcgagattggaagaggtcaacgtccctggactgcagccgggcaaaaagtattcactgcgg
gtggcagctttcaatgaagccggagccggagccagcaccaattcgctggaagtggaaact
ctggtcgagccgcacgtcctccaagcgccggccaatttgagcgtccaggcggtgtcgtcc
gtcagtttgatggccagctgggagtcgccggatctggcagccgccggtggaggagcttct
cacggcggacaacacttgcccattcgcaattacaaattattctacatggaagtgggttcg
gccgaggagcacgaagtggtgacgagtcacacgagccacttgattcacggactgaaaccc
tacacggaatattccgtctgggtcgtcgccttcaacgacaatggacccgggaccagcacc
gaagaggccaccgccaggacctggtccgatctgccatccgacacgccacagaacgtcgtc
gtcgaaccggccagctcttcgagcgtcattgtccgctgggagccgccgtcgttggagaat
cagaacggcatcatcaccggctacaagatccgttacaaacccaaaactgggcgtggacgt
ttgcctttgaatcccggctcgtccaacgccgggtcgacggccacgacggacggcagccga
cggctttacacgctgactggactcgtgcgcgggaccgagtatcaagttcgtgtctctgcc
ctaactgtcaacggttccggtcccatgactgaatggatgactgccgaaactttcgaaaac
gacctggacgagagccaagtgccggagccgcccagctcattgagagctcgaccgatgacg
aattcgattagcgtttcgtggaatccgcccagcaaccagaacgtcatggtccgcggttac
acgatcggctggggcaagggcattccggacgtttattcgaaactggtggacggcaagcag
cgggcgttcgtcattgagaaactggaagccaattcagagtacgtcatcagtttgagggct
tacaatcaaatgggagacgggcggcccatctacgagacggtgcggacgcgcgaggagtcg
acccccgagccgcccagtcccctcattccgcccgtcggattgaaagccattgtgttgtcg
tcgaccaccgtcgtcctctactggacggacaccaccttgcctcgcagtcagactgtcgcc
gactcgcggtactacgtcgtgaggtacacttcgagccacacgtcgagcaatccgcgctac
cgttacatgaactcgacagtgctcaattgcatgctggacgatttgaaacccaacactcaa
ttcgaattcgccgttaaagtcatcaagaatcgtagagaaagtccctggagtctggtggtt
ccaaacacaacattcgaagcggctccttcatcgccgccacgcgatctgacggtcgttccg
gtcgaggagaatccgtcggccattaacttgaactggcagccgcccaagcaacccaacggt
caaattaccggttacgttatcttctacacgacagacagctcgcagcgtgatcgagactgg
gtggttgaaggtgtcgtcggggataagatgaccacgaccatcaaaggcctgacaccagat
accgcatacttcatcaaaatccaggccagaaataacaaaggatacggccctttctccagc
attattcaattccgcaccaatccaagcaacggtatgacttatcacgacgctactccggtt
agcagagatagtcgaggcatatccagtatgactttgtacatcatcctgggtatcgctact
ggtatcatagtcatcctcctgattgtcgtgctggtcgttgtcttccgccgcagagattcc
ggagtgaccaactctccggatcgttccaagaaaggctacgtcaaagggaacgtcaaaggc
ggtccaggcaaactgggcaaggctgacaacccacccgacttgtggatccatcacgaccag
atggagatgaaaggattagacaaatccctgcaccgttccggctccgtcaacacggtctca
cctctcaacatgcgccgatctcaagacctggactccctggacggcatggcctccggatca
actgccggtcgtggccccagcacggcagccaacgactcgctcgatcgccgggctgcttac
gtgacagcttatgcaggaagtagcaactcactcaggcgtcccattaaacccaagagcctt
ttgattagtgtcgctaccaccacccaacctgtccgcgaacctgtggcaacagtgacaccg
atccccaacggcagtctgaatcaacacagcgactcccggcccgtctatccggcggcgccc
cgccctggaatttacccgtcggccggaccttctgctggtggccgggctcacgtgacggtg
gacgtcagcgctccgccattagagccgacttatggcagtcagggcagctatgacagccgt
tccagtctcgtccatccgccgccaggtaatatggccatgatggtgggccaaccgccgtct
atggcacctccgtcgtcggctctcatggccgtcgccgatgccaaacgcaacactcaactc
ggtcatccgctcaagagcttcacggttccggctccgcctccgcaatcggctccgcccgtc
aagatcgtctcgccaaacagcggcaacaaccgccagtcggtcaaccccatgacggcgcag
tcgagtccctacaagaagtccctggcgagcggcccagtcacgtcacctccgcctctccat
aaaaccaacagcagcggaggcgtccgatctggcgccaacgacctgatcaaatcgccggag
aagatcattcaaagttcgtacagcaccgaggagctcaaccaggagatggccaatttggaa
ggtctgatgaaggatttgaacgccatcactgccaacgaattcggctgctaa
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integrated database retrieval system
