Daphnia pulicaria: 124336038
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Entry
124336038 CDS
T08670
Name
(RefSeq) serine/arginine repetitive matrix protein 1-like
KO
K24501
PR domain zinc finger protein 1 [EC:2.1.1.-]
Organism
dpz
Daphnia pulicaria
Brite
KEGG Orthology (KO) [BR:
dpz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dpz03000
]
124336038
Transcription factors [BR:
dpz03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
124336038
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
zf-H2C2_2
zf-C2H2
SET
zf-C2H2_4
C2CH-3rd_BIRD-IDD
zf-C2H2_6
CR_prot_dom_plant
Zf-C2H2_ZNF451_C
zf-met
Zap1_zf1
zf-C2HE
zf-C2H2_jaz
B129_C2H2-zf
Motif
Other DBs
NCBI-GeneID:
124336038
NCBI-ProteinID:
XP_046645570
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All DBs
Position
4:2115540..2133480
Genome browser
AA seq
1193 aa
AA seq
DB search
MPNQGTKMEEGGWDLAELAEEDFEQLAVYIVPDAVVEPGSGTERVNRAETSLPRNLTLKP
SQALSDVLGVWSSDYIPRGTRFGPLVGDIYAKDHVPKHANRKYFWRVYNNSEVFYYIDGY
DTAKANWMRYVNPAYSSESQNLIACQYKMNIYFYTTKPILPNQELLVWYCKEFAERLNYP
VTGDLMLQRIRQQVQQNDEDGTDTESTAEIKKPNETGPSSPAASGSGSRAEENKVKHKKL
QHPADTTGSANKEAEQSPKEATLAVDTTTTATATTTTTTTRRDHGDNHPHHQHQMTPTAE
GSVRSDEGYHSNGYHDDALTPPEDSSDSDNDNYVLDFSRKPSSSSSSSTSSTTGPAAGQP
SSTSRLSPLAEEPPASTQQGSPQSDSRSTNEYRKVKIKMPKAYHYRHSSISEERDQVVVA
PPPRSQHHHRLAPSPPQQHSPPVTQSVVKSAPLVAQLSPVAPLPLSPRFRRSHPQPPQSY
SPEPMDYDEHHHRHPNREQLEHRINYERSRSRSPAGREVVPPPPPPPPPVNSLLSNGSIL
ESILLRRQGNNSATVVAAVAAAAKKESGAELLRQEYYDEVYHRERFKEAVQVIVANESHP
KPDSSAGSLPPPPNATLPLPPPPPSSSSSSSGHHRSSPSSSHLLLAPSTTVPVAISTVVY
PPYKKLHRYNIPTGSDVRDLLSSKDPNHLSPDSSCSTTAINKSIRNESSTSPSTGGGGQQ
HHHIHHLSGHHPSHGSHPFNSRSPQPSQSHQFHSTSSNGSNSRSAPSPHHPHNESAGSSA
GSLLYNVNNVAQMFSSAHFNMYAYGGAGSSASAGGGSGSTSTVPHPLASASSSSSAAHIH
PHLPMPHSPAASAASSSGGNGGDRCRDHRDPSESSIRSSASSLSPNYSQALHCHTSPGSG
SLSPIGSGSPSPNGSQGRGYRSLPYPLKKKDGKMHYECNICYKTFGQLSNLKVHLRTHSG
ERPFKCNVCTKSFTQLAHLQKHHLVHTGEKPHQCDICKKRFSSTSNLKTHLRLHSGQKPY
ACDLCPAKFTQFVHLKLHKRLHTNERPYTCGGCQKKYISASGLRTHWKTTNCKPSSLEEE
MALERSPTDSAGYDCNGSDVEEGMEDKDEEMSLDGMSCDSDSLAIQQHHHHQGQHEHHHE
LGVNSTTGRRSQSPDEGNLRGNGRQPSGNYDADSSRPSVIETANKAPQVIECT
NT seq
3582 nt
NT seq
+upstream
nt +downstream
nt
atgcccaatcaaggaacgaaaatggaagaaggtggttgggatttagccgagctggccgag
gaggatttcgagcagttggccgtttacattgtgccggacgccgttgtggagcccggcagc
ggtacggaaagagtcaaccgagccgagacgtcgttgccaagaaatttgacactgaagccg
agccaggccttgtctgacgtgctgggcgtctggagcagcgattacattccacgagggacc
cgattcggacctttggtcggtgacatttacgccaaggatcacgttcccaaacacgccaat
cgcaaatacttttggagggtgtacaacaatagcgaagttttttattacatcgacggctac
gacacggccaaggccaactggatgcgctacgtcaatccggcctattcgtccgagtcgcag
aacctgatcgcctgccagtacaagatgaacatttacttttacacgaccaaaccgatcctg
cccaatcaggaactcctcgtctggtactgcaaggagtttgccgagagactcaactacccc
gtcaccggcgacttgatgctccagaggatccgccagcaagtccagcagaacgacgaggac
ggaacggacacggagtcgacggccgagatcaagaagcccaatgaaacgggaccgtcgagt
ccggcagcgtccggttccggttccagggcggaagagaataaagtcaagcacaagaaactc
caacatccggcggatacaactggatcggccaacaaagaggccgaacaatcgcccaaggaa
gccacgctggccgttgacacgacaacaacggccacggccacaacaacgacgacaacaacc
cggcgtgatcacggcgataatcatccgcaccaccagcaccagatgacacccaccgccgaa
ggttccgtccgctcggatgaaggttaccatagcaacggctaccacgacgacgctctgact
ccgccggaagattccagcgactctgacaacgacaactacgtcctggatttcagccggaag
ccttcgtcgtcttcgtcgtcttccacttcgtcgacaacgggtccggctgccggccagccc
agttcgaccagtcgtctgagtccgttggcggaagagcctccggcgtcgacccagcaggga
tcgccgcagtcggacagccggagcaccaacgagtaccgtaaagtcaaaatcaaaatgccc
aaggcctaccactaccggcacagcagcatcagcgaggagcgcgatcaagtggttgttgct
cctcctccgcgctcccagcaccaccaccgactggccccgtcacctccgcaacagcattcg
cctccggtgacccagtcggtggtcaaatcggcgcctttggtggcccaactctcaccggtc
gcccctctgccgctcagccctcgattccggcgtagtcatccgcagccaccgcagtcttat
tcgccggaaccgatggattacgacgagcaccatcatcgccatcccaaccgggagcaactg
gagcaccggatcaactacgagcgatcgcgatcccgctcgcccgccggacgggaagtcgtt
cctcctcctccgccgcctccgccgcccgtcaactcgttgctgagcaacggaagcatcttg
gagagcatcctgctgagacgccagggcaacaacagcgccaccgtggtggccgctgtggcc
gctgcggccaaaaaggaaagcggagcggagcttttgcgccaggagtactacgacgaggtt
tatcaccgggagcgattcaaggaggccgtccaagtcatcgtggccaacgaatctcacccc
aaaccggattcgtctgccggatctttgccgcctccgcccaatgcgactcttccactgcca
ccacctcctccgtcttcttcttcatcttcttccggccatcatcgatcgtctccttcgtct
tcccacctgctcctggcgccgtcgacgacggtgcccgtggccatttcgacggtcgtgtat
ccgccgtacaagaaactccatcgctacaacattccgaccggatcggacgtgcgcgatctc
ctcagcagcaaggatcccaatcatctcagcccggattccagctgctcgacgacagccatc
aataaatccatccgcaacgagtccagcacttcgccgtcgaccggcggcggtgggcagcag
caccaccacatccaccacctcagtggtcaccatccgtctcacggatcgcatccgttcaac
agccggagtccgcaaccgtcgcagtcgcatcagttccacagcaccagcagcaacggatcc
aacagccgatcggctccatctcctcatcatccgcataatgaatccgccggaagctccgcc
ggaagtttactgtacaacgtcaacaacgttgcccagatgttctcctcggcccatttcaac
atgtacgcttacggtggagccggatcgagtgcatccgccggcggaggcagtggcagcact
tccaccgtccctcaccccctggcttcggcttcttcttcctcatccgccgctcacatccat
ccgcatttaccgatgccgcacagtccagcggcttcggccgcctcttcatccggcggtaac
ggaggagatcgttgccgggaccatcgtgacccgtccgaatcttccatccggtccagcgct
tcatctctcagtcccaactacagccaggccctgcactgccacacctcgcccggaagcgga
tcgctgtctcccatcggatcgggcagtccgtctcccaacggaagccaagggcgcggctac
cgctcgttgccgtacccgttgaagaagaaggatggaaaaatgcactacgagtgcaacatt
tgctacaagacgttcggccagctgtccaacctgaaagttcacttgcggacgcattctggc
gagcgccccttcaagtgcaacgtctgcaccaagagtttcacccagcttgcccaccttcag
aagcaccacctggtccacactggggagaaaccgcaccagtgcgacatttgcaagaagagg
ttcagcagcacgtccaatctcaagacccatttgcgactgcattccggccagaagccctac
gcctgcgatttgtgtccggccaaattcacccagttcgtccacttgaagttgcacaagcga
ttgcacaccaacgagcggccgtacacttgcggcggatgccagaagaagtacatcagcgcc
agcggattgcggacccactggaagacgaccaattgcaagcccagcagtttggaggaagag
atggcccttgaacggtcgcccaccgactcggccggctacgattgtaacggctcggatgtc
gaagaaggaatggaggacaaggatgaggaaatgagtttggacggaatgagctgtgatagc
gactcgttggccattcagcaacaccatcaccaccaaggccagcacgagcaccaccacgag
ctgggcgtcaattcgacaacgggccgacggtctcaatcgcccgacgaagggaatctgcgc
ggaaacgggcgacagccatcgggaaactacgacgccgattcgtctagaccgagcgtcatc
gaaacggccaacaaagcgccacaagtcatcgaatgcacataa
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