Daphnia pulicaria: 124336043
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Entry
124336043 CDS
T08670
Name
(RefSeq) replication factor C subunit 3-like
KO
K10756
replication factor C subunit 3/5
Organism
dpz
Daphnia pulicaria
Pathway
dpz03030
DNA replication
dpz03410
Base excision repair
dpz03420
Nucleotide excision repair
dpz03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
dpz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
124336043
03410 Base excision repair
124336043
03420 Nucleotide excision repair
124336043
03430 Mismatch repair
124336043
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dpz03032
]
124336043
03036 Chromosome and associated proteins [BR:
dpz03036
]
124336043
03400 DNA repair and recombination proteins [BR:
dpz03400
]
124336043
DNA replication proteins [BR:
dpz03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
124336043
DNA Replication Termination Factors
ELG1-RFC complex
124336043
Chromosome and associated proteins [BR:
dpz03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
124336043
DNA repair and recombination proteins [BR:
dpz03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
124336043
Check point factors
HRAD17(Rad24)-RFC complex
124336043
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC_C
RCF1-5-like_lid
DNA_pol3_delta2
AAA
Rad17
AAA_lid_RFC1
AAA_22
Sigma54_activ_2
AAA_11
Rep_fac_C
AAA_2
AAA_5
AAA_16
RuvB_N
Mg_chelatase
nSTAND3
Hda_lid
Na_H_antiporter
Motif
Other DBs
NCBI-GeneID:
124336043
NCBI-ProteinID:
XP_046645589
LinkDB
All DBs
Position
1:13257081..13258795
Genome browser
AA seq
355 aa
AA seq
DB search
MSLWVDKYRPNTLAKLDFHLEQGERLQKMVTKGNFPHLLIYGPPGAGKKTRVSALLRELY
GPGVEKLRMEHQNFTTPSNKKIEVMTVASNYHIEVNPNDAGIYDRIVIQEMIKNIAQAQQ
LDIGGQREFKVVILTEVDKLTKDAQHALRRTMEKYMTTCRLILCANSTSKIIAPLQSRCL
AIRVPAPSQDDIIKVLQMVSKKEGITLPTDFAIRIAERSERNLRRALLMLEACKVQQYPF
SVKQEIVEPDWEVYLRETGQKMVSEQSPKALLEVRGRIYELLSHCIAPEMIIKKLLKEIL
KNCDGQLKAEVTSMAAYYEHRLCLGSKVIFHIEAFVAKFMAIYKRFLEDSFANMM
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atgagtctttgggtagataaatatcgtcctaacacacttgcaaaactagactttcacctt
gaacaaggagaacgcttgcaaaaaatggtaaccaaaggtaatttccctcatttgcttatc
tatggcccacctggagcaggaaagaaaacacgagtatcagcactcctgagagaactttat
ggacccggagtggagaagttgcgtatggagcatcagaattttacaaccccatccaacaag
aaaatagaagtcatgacagtcgcaagcaactatcatattgaagttaatccaaatgatgca
gggatctatgacagaattgttatccaagaaatgatcaagaacattgcacaagcacaacaa
ttagatattggtggtcaaagagaatttaaagttgttatactgactgaggttgacaaatta
accaaggatgcccaacatgctctcaggagaaccatggaaaagtacatgactacctgtcgc
ttgatcctgtgtgcaaattcaacttcaaaaataattgcaccactccaaagcagatgtctt
gccataagagttccagcccctagccaagatgacatcattaaagttttgcagatggttagt
aagaaagaagggattaccttgcccaccgattttgccattcgtattgcagagagatctgaa
cgtaatttaaggagagctctgttaatgttagaggcatgtaaagtacagcagtatcctttc
agtgttaaacaagagatagttgaaccggattgggaagtttatcttcgagaaacaggacaa
aagatggtttctgaacaaagtccaaaagcgttgctggaagtacgaggaagaatctatgaa
cttctatctcactgcattgccccggaaatgatcattaagaaactgctcaaagaaattctg
aaaaactgtgatggtcaattaaaagctgaagtaacttcaatggcagcttactatgaacat
cgcctttgccttggaagtaaagttatctttcatattgaggcttttgttgctaaattcatg
gcaatttataagcgttttctggaagatagctttgctaatatgatgtaa
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