Daphnia pulicaria: 124336083
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Entry
124336083 CDS
T08670
Name
(RefSeq) tuftelin-interacting protein 11-like
KO
K13103
tuftelin-interacting protein 11
Organism
dpz
Daphnia pulicaria
Brite
KEGG Orthology (KO) [BR:
dpz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dpz03041
]
124336083
Spliceosome [BR:
dpz03041
]
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
124336083
Other components
Complex C specific factors
124336083
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Ortholog
Paralog
GFIT
Motif
Pfam:
GCFC
TIP_N
G-patch
DUF7197
G-patch_2
Motif
Other DBs
NCBI-GeneID:
124336083
NCBI-ProteinID:
XP_046645674
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Position
4:complement(2335715..2339401)
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AA seq
826 aa
AA seq
DB search
MANEEEMESFDVSERDLYDAFQPGQRRFKKMTKNQQIYGVFDEDEGENFTQRSTSSSGRP
GFSKSSTAKDYTTPVDFVKGGVQQGSKKEKLPEKKTKLFSYSESDEEDDSHNSASEINLT
AGKKTLQDKKQPRKMFDRFSKDAKSSGAGDLGEWEKHTKGIGAKLLFQMGYQPGKGLGKE
LQGRSQPVEAQVRKGRGAVGMYGAEHKNEPAKKQASDDEEEKEYKKNLAHWRKDLVEPSS
KKKKIQYMYRTSEEVIEEMSKGGVHRMAREYSEISKAKVIDMTGREQRVLQGYSALRTKR
TEEPSDSEPAPAGLKVDKFQLEKLCYNLDTLVDHCEHEIIQNAKELSYNQEQILAMESQV
KNMSVEVSKEITRMEMLTSMLGVLEQLELKQATNELSLDFLWEQIRNLEQSYPEEYVSSD
LANVTLTYLIPLMKLRLSTYWRPMDSKSTDEACRLIFQRWRPILEFCNKTQTNSRGGIVK
NDSRMDPYHGLLWHAWMPAFRGLVGQWTCKNADPMVDLIESWEQILPNWIMENILDQLIL
PRIQKEVDSWNPLTDLIPIHAWIHPWLPRLGSKLEIVYPNIRHKMAQALVAWSPSDQSAR
SVLMPWVPVFSKGSMDAFLIKNILPKLQVAIANWDINPSRQELDVWHWIMNWKDLMPSQS
LIQLLVSNFFPKWLQVLVAWLNHHPNYEEIVVWYTGWKALFPPEIAQNPAVQEQFTRALD
LMNRSLAVGGQVDFTPPPVPIMTPIIAAPLPVPETVVPHGFRELVEYRCAQQGILCIPLV
NRFQAGRPIFRVGNVLCYFDRQVVFVLVNGIWTPVTAQQLLDMAVL
NT seq
2481 nt
NT seq
+upstream
nt +downstream
nt
atggctaatgaagaagagatggagagtttcgatgtgtcagaaagagatttgtatgatgct
ttccaacctggtcaacgtcgttttaaaaagatgacgaaaaaccaacagatatatggagta
tttgatgaagatgaaggggaaaatttcactcagcggtcaacgtcatcttctggccgtcca
ggtttttccaaatcgtcaacagccaaggattacaccacaccagttgattttgtcaaaggt
ggtgttcagcagggatccaaaaaggagaaattacctgagaaaaaaaccaagctcttttcg
tattcagagagtgacgaagaagatgactcccacaatagtgccagtgaaattaatcttaca
gctggaaagaaaacattacaggacaagaaacagcccagaaaaatgtttgataggttcagc
aaagatgcaaagagctcaggtgctggcgatcttggtgaatgggaaaaacatactaaagga
attggtgctaagcttctatttcagatgggttaccaacctggaaaaggtcttggtaaagag
ttacaaggaagaagccaacctgtggaagctcaggttcgcaaaggaagaggagcagttggt
atgtatggagctgaacacaaaaatgaacctgcaaagaaacaagcatcagatgatgaagaa
gagaaagagtacaagaaaaacttggcccactggagaaaagatttagtcgaaccatcgtcc
aagaaaaaaaagatccaatatatgtatcgtacttccgaagaagtgattgaagaaatgtct
aaaggtggtgttcatagaatggctcgagaatacagtgaaatttccaaagccaaagtgatt
gatatgacaggccgagaacagcgtgttcttcaaggatacagtgctttgagaaccaaaagg
acggaagagccaagcgattccgaacctgcaccagctggactcaaagttgataaatttcaa
cttgaaaaactctgctacaacttggacactctagtagaccattgtgaacacgaaattatt
caaaatgccaaagagctctcctacaatcaagagcaaatattggccatggaatcgcaagtg
aaaaatatgagcgttgaggtttctaaggagatcacacgaatggaaatgcttacatcgatg
ctgggagtcctagaacagcttgaactgaaacaggcgacaaacgagctatctctagacttc
ctttgggagcagataaggaatttggaacaaagctacccggaagaatacgtatcgtcggat
ctagccaacgttactctgacttacctcattcccctaatgaagttgcgattatcaacctat
tggcgtcccatggattctaaatcaacagatgaagcttgtcgtttaatttttcaacgatgg
agacctatcttggaattttgcaacaagactcagaccaacagtcggggcggaattgttaaa
aatgatagtcgaatggatccttatcacgggttgttatggcatgcctggatgccagcattt
cgaggactcgttggacagtggacttgcaaaaatgcagatccaatggttgacttgatcgag
tcgtgggagcaaattttgccaaactggatcatggaaaatattttggatcaactcattctt
cccagaatacaaaaagaagtagacagttggaatccgttgactgatctcattcctattcat
gcctggatccatccctggcttccccgactaggatcaaaactggaaatcgtatatcccaac
attcggcataaaatggcacaagcgttggtggcttggtcaccgtcagatcagtctgcacgt
tccgttttgatgccttgggttccagttttctccaagggttccatggatgctttcctcatc
aaaaatattttaccaaaactgcaagttgctatcgcaaattgggacataaaccccagtcga
caagaattagatgtttggcactggataatgaactggaaagatcttatgccttcccaaagc
cttatacaattacttgtgtcaaatttcttcccaaaatggttgcaggttctggttgcgtgg
ctaaaccaccacccaaattacgaagaaattgtggtttggtatactggttggaaggcctta
ttccctccagaaatcgcacaaaatcccgctgttcaagagcaattcacaagggcactggat
ttgatgaatcgctcattggctgtaggagggcaagtggattttactccgcctcctgtgccc
atcatgacgccaatcatagcagctccacttcctgttccggagactgtggtgccacatgga
tttcgtgaacttgtcgagtaccgttgtgcccagcaaggaattttgtgcattccgcttgtc
aatcgatttcaagctggaaggcccattttccgagttggaaacgttctttgctattttgat
cgacaggttgtattcgttttggtcaatggtatatggactcctgtaacagctcagcagttg
ctagatatggcagtcttgtag
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