KEGG   Daphnia pulicaria: 124336106
Entry
124336106         CDS       T08670                                 
Name
(RefSeq) cullin-3-A-like
  KO
K03869  cullin 3
Organism
dpz  Daphnia pulicaria
Pathway
dpz04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:dpz00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    124336106
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:dpz04121]
    124336106
   03400 DNA repair and recombination proteins [BR:dpz03400]
    124336106
Ubiquitin system [BR:dpz04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul3 complex
    Cullin
     124336106
DNA repair and recombination proteins [BR:dpz03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     124336106
SSDB
Motif
Pfam: Cullin Cullin_Nedd8 DUF5308 WAC_Acf1_DNA_bd
Other DBs
NCBI-GeneID: 124336106
NCBI-ProteinID: XP_046645713
LinkDB
Position
4:2862692..2866194
AA seq 771 aa
MMKGGLGGGSKKEGKMRIRAFPMTMDERYVENIWSLLKNAIQEIQKKNNSGLSFEELYRN
AYTMVLHKHGERLYNGLREVVTHHLESKVRQDVLASLNNNFLHILNQAWSDHQTSMVMIR
DILMYMDRVYVQQNNVDNVYNLGLIIFRDQVVRYGGIRDHLRHILLEMVVRERKGEVADK
LSVRAACQMLMVLGIDSRAVYEEDFERPFLSQSAEFYRSESQRFLGENSASVYIKKVEAR
INEESERAKHYLDESTEQRIVAVVEEELIQKHMKTIVEMENSGVVHMLKCQKTDDLHCMY
KLLGRVADGLRTMASCVSAHLREEGKALVNVDESGANALNFVQSLLDLKDRYDTFLGKSF
VNDPIFKKMISSDFEYFLNLNLKSPEYLSLFIDDKLKKGVKGMTEQDIELVLDKTMVLFR
FLQEKDIFERYYKQHLAKRLLLNKSVSDDSEKNMISKLKTECGCQFTSKLEGMFKDMSIS
NMLMEDFKNHIQTSGTSLYGVDLSVRVLTTGFWPTQSSATCTLPLAPRNAFEVFRRFYLA
KHSGRQLTLQPALGSADLSAIFYGPRREESETKEKADGPSSSTPSASANGPRKHIISVST
YQMCILMLFNTRDRLTYEDIMNETDVPKKDLDRALQSLAMGKPTQRVLVKSPKGKDILPS
SIFAVNDSFTSKLHRVKIQTVAAKGESEPERKETRSKVDEDRKHEIEAAIVRIMKARKSM
QHNLLVSEVTEQLKSRFLPSPVIIKKRIEGLIEREYLARTPEDRKVYTYVA
NT seq 2316 nt   +upstreamnt  +downstreamnt
atgatgaaaggtggtctcggcggcggttcaaagaaagaaggaaaaatgcgaattcgtgca
ttccctatgacgatggacgagaggtatgtggaaaatatttggagtttactgaagaatgcc
attcaagaaattcagaagaagaataactctggtctcagttttgaagaactttaccgaaat
gcatacacaatggttctacacaaacatggagagagattgtacaatggccttagagaagtt
gttactcatcatttagaatctaaagttcgtcaagatgtgctggcttccttaaacaacaat
ttccttcacattctaaatcaagcatggagtgatcatcaaacatctatggttatgattcgt
gacatcctcatgtacatggacagagtttatgttcaacaaaataatgttgataatgtttac
aatcttggattgataatttttcgtgatcaagttgttcgttatggaggcattcgtgaccat
ttaaggcatattcttttggaaatggttgtcagagagcgtaaaggagaagttgcagataag
ctttctgttagagcagcttgtcaaatgctcatggtgctgggtatagacagtcgagctgtc
tatgaagaggattttgaaagaccttttctttctcaatctgcagaattctacaggtctgag
agtcagcggtttttaggagagaattcagcttcagtttacataaagaaagtcgaggcgcgc
attaatgaagaatcggaaagagccaaacattatttggatgagtcgaccgagcagcgtatt
gttgcagtagttgaagaggaacttatacagaaacacatgaaaacgattgttgagatggaa
aattctggtgtagtacacatgttaaaatgtcagaaaactgacgacttacactgcatgtac
aagttgttgggtcgtgtagcggatggtttgcgaaccatggctagttgtgtcagcgcgcat
ttacgagaagaaggcaaagcactggttaatgtcgacgaatccggtgccaatgcattgaat
tttgtccagagtctattagatcttaaggatcgctatgatacatttctgggaaaatccttc
gtaaacgatccaatctttaagaaaatgatctcttcagattttgaatattttcttaatttg
aatttgaaatctcccgaatatctatcactctttatcgatgacaagctcaagaagggcgtt
aaaggaatgacagagcaggacatagaactggtgctcgacaaaaccatggttttgttccgt
tttctccaggaaaaggatattttcgagcgttattataaacaacatttggccaagcgcctg
ctgctgaacaaatctgttagcgatgatagcgagaagaacatgatttctaagctgaagact
gaatgtgggtgtcaatttacctcgaaattagagggcatgttcaaggatatgtctatctcc
aacatgctcatggaagacttcaaaaatcacattcaaacttctgggacctccctttacgga
gtggacttgagtgttcgcgtactaacaactggattctggccaacacaatcgtcagctact
tgtacactaccattggcaccacgcaacgcttttgaggtctttcgtcgattttatttagca
aagcacagtgggcgacagttgacgctacaacccgctctagggtcggctgatctgagcgca
atcttttatggacctagacgagaggagtctgagacaaaagaaaaagctgatggccccagc
tcgtcaacaccctcggcatcagctaatggaccgcgaaaacacataatctccgtttcaacc
tatcagatgtgtattcttatgctgtttaacacccgagataggctaacttacgaagatatc
atgaatgaaactgacgttccgaaaaaagatctggatcgtgcattgcaatcgcttgcgatg
ggcaaaccgactcaacgcgttcttgtcaaaagtcccaagggtaaagacatcctcccgagt
tctatctttgccgtcaacgatagtttcacgtcaaaactccacagagtgaagatccagaca
gtcgcagccaagggagaatcagagcctgaaagaaaagagacgcgttccaaggtcgacgaa
gaccgaaaacacgaaattgaagcagccattgtacgcattatgaaagcaagaaaatctatg
cagcacaacttgttggtaagcgaagttactgaacaattgaaaagccggtttctgccttcg
ccagttatcattaagaaacgaattgaaggcttaattgaacgtgaatacttggctcgcact
cctgaggacaggaaagtgtatacatatgtggcctag

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