KEGG   Daphnia pulicaria: 124336894
Entry
124336894         CDS       T08670                                 
Name
(RefSeq) MMS19 nucleotide excision repair protein homolog
  KO
K15075  DNA repair/transcription protein MET18/MMS19
Organism
dpz  Daphnia pulicaria
Brite
KEGG Orthology (KO) [BR:dpz00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:dpz03036]
    124336894
   03400 DNA repair and recombination proteins [BR:dpz03400]
    124336894
Chromosome and associated proteins [BR:dpz03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    124336894
DNA repair and recombination proteins [BR:dpz03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     124336894
SSDB
Motif
Pfam: MMS19_N MMS19_C HEAT_EZ TOR1L1_N HEAT_2 HEAT_EF3_GNC1 HEAT_ECM29
Other DBs
NCBI-GeneID: 124336894
NCBI-ProteinID: XP_046646760
LinkDB
Position
4:13735389..13739456
AA seq 962 aa
MAISTAIHKLRDSFNSEESANESIRCISQSIASKELTILKLVEDLQPDLLNQQNTHRCKA
VSTIGTILEQLGPELKGLNDKEVELVTEFFCSKLKDHHSILPAALQGLHALSTAPKLSPG
LARLISQSIFQDVHCQSQLQNDRRAIYKTLKNLLAFHLKELQDLGQDFVFGLIQLADQER
DPRNLLILFSIFPVVARYFRFEPFTEEFFEVFSCYFPIDFTPPANDPYAVTKEQLCDGLR
QCLAGSPHFAEYFLPLLQEKLESDLVSAKVEALKTLELCCQTYQPGQLEKWVDSFWTSIR
REVLINVNTDDLEHASLDALAALSRAFTTDGEFNSPAFTKLLKNVLTECQGHLCEPERRL
MTPSSYILLAICSGSAPACALIVSQVIPLLMDQYRIRPQSNPRQFILNSLNKMVHAGLYG
FTEENVAQSGVASLIPKLLELYLEVLKEDDAVLRNLSLQGLSHLIGTCLNHQDLEKVNGT
LLDLLQKSTATDSVIAEIGHFFCKSAEKNENLFHEQVLVKLLDIAVSGKANAVFLVLSTL
PTLPQIRAQVVSRLMVVLEQPELELRLEVLKVLTHFAQRDELEIFQQLHRWGLKTLEDGD
PPASLQATCVLLRNLASSLSSAKATEFINEQTEQYVGQHLARSPWTLSIMEATLGSLDAT
PSGHSLERLVNTLEPLTVCHPKADVRLSACRLMAALVNKLPEGQELEAILDSLRRKWQDP
STDRCNSVCLFVWITKALLMRSYSKLNQYIQELVDSLNDPTHGYLVAEGFKTILCETEEC
LNFNCHANIRLMYRQRFFQEVVPRLLKLYRESESCNKAACFAAIANQLAFIPEGVLIAHI
TTLIPLLIQCLSTDQPAQLIISTINAFMGLMSDNVSAIEEYISSLVPRLLTLAKDGINMD
VRRLALQCLSELRKAQSIVLLPLRSEVILRLVPCLSDKKRLVRREAALARQKWIMLGQPG
CN
NT seq 2889 nt   +upstreamnt  +downstreamnt
atggcgatctcgactgcgattcacaaactcagggattcgtttaattcagaagaatccgcg
aatgaatctattcgctgtattagtcaatcaattgcatcgaaagaattaacaattctcaag
ctagttgaagatttgcaaccagatttacttaatcaacaaaatactcaccgatgcaaagca
gtgtcaactattggcacaatcttggaacagctgggacctgaattgaagggactaaatgat
aaggaagtagaacttgtaacagagttcttttgtagcaagctaaaagatcatcattcaata
cttcctgccgcactgcaaggcctccatgcattgagcacagcacctaagctttcccctgga
ttggccagattgatatcccagagcattttccaagatgttcattgtcagtcacaattgcag
aatgacagaagagcaatttacaaaacactgaaaaacctcctggcttttcatctaaaagaa
ttacaagacctaggccaagattttgtttttggtctcatccagttagctgatcaagaaaga
gacccacgtaacttgttgattctcttcagtattttccctgtagttgctcgttacttcaga
ttcgagccgtttacagaagagttttttgaagtttttagttgctacttccctatcgatttc
acccctccagctaatgatccttatgcagtaactaaagaacagctctgtgatggattacga
cagtgccttgccggtagccctcatttcgcagagtattttttgccgttactgcaagagaaa
ttggaatctgacttggtttcagctaaagtagaagccttaaaaaccttggaactctgctgt
cagacgtatcaaccaggccaacttgaaaaatgggtggactctttctggacgagtatccgc
agagaagtcttgatcaatgtcaataccgacgatcttgaacatgcctcacttgatgctctt
gctgctttatcccgagcttttacaacggacggagaatttaatagtccagcttttaccaaa
ttactaaaaaatgtgctgaccgaatgtcaggggcacttgtgtgaaccggaacggcgatta
atgactccgagcagctacattttgctagcgatatgctcgggaagtgcgcccgcgtgtgca
ttaattgttagccaggtcattccccttttgatggaccagtacaggatcaggccacagtca
aatccacgtcagttcatccttaatagtttgaacaaaatggtgcatgctggtctctatgga
ttcactgaagaaaacgttgctcaaagtggtgtagcttctctgataccaaaattgttagag
ttgtaccttgaggtcttaaaagaggatgacgcagttcttcgcaatctaagtctgcaagga
ttgagtcatttaattggcacctgtttgaatcaccaagacttggaaaaggtcaatggaaca
cttttagatttactccagaaatcaacagccaccgatagcgttattgcagagattggtcat
ttcttttgcaaaagcgcagagaagaatgaaaacttgttccatgagcaagtcttggttaag
ctgttagatatagcggtctcaggcaaagccaatgcggtttttcttgtgctgtcaactcta
ccgacgttgccccagattcgtgcgcaggtggtatcccgtctaatggttgtgctcgaacaa
cccgaactggaattacgactggaagtactcaaagttttgactcatttcgcacaaagggac
gaactagaaatattccagcaattgcaccgctggggattgaaaacattggaagatggagat
cctccggcgtcactccaagccacttgtgtcttattgagaaatctggcttccagtttgtct
tccgcgaaagccacggaattcatcaacgagcaaaccgaacaatacgttggtcaacatctt
gcccgctctccgtggacgttgtccataatggaagccacattgggatcattggatgccaca
cctagcggacacagtcttgaacgactagttaacacacttgaaccccttactgtttgccat
ccaaaagccgatgtcagactgtctgcctgtcggcttatggccgctctggtcaacaaactt
cctgaaggtcaagaactggaagctatacttgattcgttgcggcgcaaatggcaggatcca
tctacagaccgatgcaattctgtgtgcctgtttgtttggataactaaagctctgctgatg
agatcttattccaagcttaatcagtatattcaagaattagttgattcgctgaacgatccc
acgcacgggtacctagtggcagaaggatttaaaacgattttgtgtgaaaccgaggaatgc
ctgaatttcaattgtcatgccaacatcaggctaatgtaccgacagaggttttttcaagaa
gttgtacctcgcctgttgaaactgtatcgagagtccgagtcgtgcaacaaagctgcttgc
ttcgccgccatcgccaatcaactagccttcattccggagggtgttttaattgcccacata
accacacttatcccactgctgatccagtgtctgagcacagaccaacccgctcagctaatt
atttctaccatcaacgcgttcatgggtctcatgtccgacaatgtcagcgctatcgaagaa
tacatcagcagcctcgtgcccagattactcacccttgccaaagacggcattaacatggac
gtccgtcgacttgcccttcaatgtctctccgagctcaggaaggcccaatcgattgtttta
ctcccacttcggtcggaggtcatcctccgtctcgtcccttgcctgtccgacaaaaagcga
ttggtccggcgtgaggcagcattggcaagacaaaagtggattatgttgggccagcccggc
tgtaactaa

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