Daphnia pulicaria: 124337518
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Entry
124337518 CDS
T08670
Name
(RefSeq) 25S rRNA (cytosine-C(5))-methyltransferase nop2-like
KO
K14835
25S rRNA (cytosine2870-C5)-methyltransferase [EC:
2.1.1.310
]
Organism
dpz
Daphnia pulicaria
Brite
KEGG Orthology (KO) [BR:
dpz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dpz03009
]
124337518
Enzymes [BR:
dpz01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.310 25S rRNA (cytosine2870-C5)-methyltransferase
124337518
Ribosome biogenesis [BR:
dpz03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
124337518
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SLC52_ribofla_tr
Methyltr_RsmB-F
RsmF-B_ferredox
Methyltr_RsmF_N
TRM5-TYW2_MTfase
Fibrillarin
Motif
Other DBs
NCBI-GeneID:
124337518
NCBI-ProteinID:
XP_046647498
LinkDB
All DBs
Position
1:12381491..12386551
Genome browser
AA seq
1020 aa
AA seq
DB search
MGRKGNFVEKTPSGPGRKAKKQKPPTLPDHLKEVKEPKETLGRRSQKRAAKRSAVKAGTA
TRKKQPAKKNKLTSNESLDSEDLSDEEGEKKNLFDDGDSDSMGEGSDDEPLADNFKGSSE
GSSDDDDEEELPIEKKSKQLKMKKEKVDEEAEAELQMNIQQSEKYTLPSGEEIEKEVLLP
PDLTVLKSRIKEVIGVLSDFTIKREEGRDRVEYLEQLRKDLCTYYSYNDFLMEAFMETFP
LGELIEFLEANETPRPMTIRTNTLKTRRRDLAQALINRGVNLDPIGKWSKVGLVIYNSQV
PVGATPEYLAGHYILQGASSFLPVMALAPQEGDKVLDMSAAPGGKTSHIAALMKNTGMLF
ANDANPDRAKAVVGNLHRLGVTNAVVMTYDGKILPKMSRGYNRVLLDAPCSGSGVISKDP
SAKTSKDSKDIARCSHLQKELILAAIDCADEGGYIVYSTCSVLVQENEWVVDYALKKRHV
KVVETGLDFGRDGFPRFQKLVFHPSVKLCKRFYPHTHNMDGFFVAKLKKISNNIPSSAPE
VEEEVAEEKNSDDSDEETVKSKRMKRKKGKANGSLNKKTGPKIAKNGTDAKDDKVNGVAK
KGSAIVKKKMGKQQKKKIGLDLGPIFYSVMHLLVPHIVHEKPSIYVLMVIGVLSSLLMGF
FWDATSYINGEEHSTGLLTLLFFLSLVDCSSSVLFMPFMARFRQAYLTSYLIGEGLSGFL
PSIFALIQGVGGNPSCRNISNIVNGSESWQIEAFYPEPNFSVSAFFFILMGLMVCCAASF
IGLNHCGVARQERYESVATRIPVAIDNQTFVASTEVVDPTFNGKSAKINYQIELDSVSEE
QQQVNTDIPKSVFIYLLLLQAWVCALSNGALPSIQSYSCLPYGNTAYHFAVTLSAMANPL
SCLIAYFLPITNVCLIVVFSFLGTSVSAYIIALAALSPTPPLVGYPSGETLMILSWILCV
GLLTYVKVSIASLFRMEEGKGNRNLFWFGVFTQVGSAIGSIIAFLLVNVYQYFDAYYPCT
NT seq
3063 nt
NT seq
+upstream
nt +downstream
nt
atgggacgtaaaggtaattttgtcgagaaaactcccagtggtccgggtaggaaagccaaa
aaacagaaacccccaactctaccagaccatctaaaagaagtgaaagaaccgaaagaaact
ttgggcagaagatcacagaagcgtgcggcaaaacgcagtgctgtcaaagctggaacagct
actcgtaaaaagcagccagccaagaaaaataagcttacgtcaaatgagtctcttgacagt
gaagacttgtcagatgaagagggagaaaaaaagaacctttttgatgatggagattcagat
agcatgggcgaaggtagtgatgacgagcctttggctgacaacttcaagggaagctctgaa
ggcagttctgatgatgatgatgaggaagaattacctattgagaaaaagtctaaacaactc
aaaatgaagaaagaaaaagtagatgaggaagctgaagcagaactacaaatgaacattcag
cagtcagaaaagtacacacttccaagtggagaagaaattgaaaaagaagtgctacttcct
ccagatttgacagtgcttaaatcaagaattaaagaagttataggggtcttgagcgacttc
accatcaaacgcgaagagggtcgtgacagagttgaataccttgaacaactacgtaaagat
ctctgcacctactacagctacaatgattttcttatggaggcatttatggaaacttttccg
cttggcgaattgatcgaattcctcgaagcaaacgaaactcctaggcccatgacaattcgt
acaaataccttaaagacgagaaggcgagacttggctcaggcgctcatcaacagaggagtg
aatcttgatcctattggaaagtggtcaaaagttggtcttgttatctataactcgcaagta
cctgtcggtgcaacccccgagtatttggctggtcactacattttacagggagcttctagt
tttttgcctgtcatggcactggcacctcaagaaggcgacaaggttctcgatatgagtgca
gctcctggtggtaaaacatctcacattgctgcgctgatgaagaatactggtatgctattc
gctaacgatgcgaatcctgatcgagcaaaggctgttgttggtaatttacatcgtcttgga
gtaaccaacgctgttgtgatgacctacgacggaaaaattttacccaagatgagcagagga
tataatcgcgtcttactggatgcgccatgcagtggttcaggtgttatttccaaagatcct
tcggcaaaaacatccaaagatagcaaagacattgcccgttgttctcatcttcaaaaggag
cttatcctggcagccatcgactgtgccgatgaaggtggttacatcgtctactcaacgtgt
tctgtacttgttcaagaaaacgaatgggtagtagattacgctttgaagaaacgccacgtc
aaggttgtcgagactggtctcgatttcggtcgggatggcttccctcggttccagaaatta
gtattccacccatctgtaaagttatgcaagagattctatccccacacacacaatatggat
ggtttctttgtagccaagttgaagaagatatctaacaatataccatcttctgccccagaa
gttgaagaagaagtggccgaagaaaagaacagcgacgattctgacgaggagactgttaag
agcaagaggatgaagaggaagaaggggaaggcaaacggttctttaaataaaaagacaggt
ccgaaaattgctaaaaatggaactgatgcaaaagacgacaaggtcaatggagtcgccaag
aagggcagcgctattgtgaagaagaaaatgggaaaacaacagaaaaagaaaatcggcctg
gatttggggcccattttctattccgtaatgcatcttctcgtacctcatattgttcacgaa
aaacccagcatttatgtcctcatggtcatcggagtcctttcctctcttctgatgggcttc
ttctgggatgctaccagctacatcaacggagaagaacacagcacaggactccttacatta
ctcttcttcctgtccctggtcgactgctccagttcagttctcttcatgccttttatggcc
cgttttcgtcaagcgtacctgacgtcttacctgatcggcgaaggtctcagcggttttctt
ccaagtatcttcgcactaattcaaggtgtcggtggcaatccatcctgccgcaatatctcg
aacattgtgaatggatccgaatcgtggcagatagaagctttctatcctgaacccaatttc
tcagtttcagctttctttttcatcctgatgggtttgatggtttgttgcgccgcttctttc
atcgggcttaatcattgtggagtagctcgtcaagagcgttacgagtcagtagctacccgg
atacctgtagctatagataatcagacttttgttgcgtcaacagaagtagttgatccaacg
ttcaacggcaaatctgcaaagataaattaccaaattgaattggactcggtaagcgaagag
caacagcaggtcaacacagacatcccaaaatctgtctttatctatttattgctgttgcaa
gcttgggtatgtgccctgagtaatggagctctcccaagcatacaaagttactcatgttta
ccctatgggaatacggcatatcattttgcagttactttgtcggcaatggcgaatcctttg
tcatgtcttatcgcctactttctaccgatcacaaatgtatgtctgatagtcgtcttctcc
ttcttgggaacatcagtttctgcttacataatagcactagccgcactaagtccgacacct
cctctggtcggatatccttcaggagaaacgcttatgattctttcgtggatcctgtgcgtc
ggcctcctgacgtacgtcaaagtcagcattgcgtctcttttccgtatggaagaaggaaag
ggaaatcgcaacctgttttggtttggagtattcacacaggtgggatcagctattggctcc
ataattgctttccttctcgttaacgtctatcagtatttcgatgcatattatccatgcaca
taa
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